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The map label for this gene is 39997122

Identifier: 39997122

GI number: 39997122

Start: 2215989

End: 2217110

Strand: Reverse

Name: 39997122

Synonym: GSU2024

Alternate gene names: NA

Gene position: 2217110-2215989 (Counterclockwise)

Preceding gene: 39997123

Following gene: 39997121

Centisome position: 58.13

GC content: 58.29

Gene sequence:

>1122_bases
ATGGAACACGGAACCGAATCGTTCTGGACCGACATCAAGCGCTATGAGGATATCCTGGCCAAAGATCCCGGATCGTACTG
CTTTGCGCCTCTTTCTGAGCTGTATCGCAAGGTAGGGCTACTGGACGACGCCATCATGACGGCCCGGACGGGGATCGGGC
AGCATCCGGAGTATGTCGGGGGGTACATGGCTCTCGGCCGCGCCTGTTTCGAAAAAGGGGAGCGGACGGAGAGCAGGGCA
GCCCTGGAGAAGGTCGTACGGGTAACGCCGGATAATCTTCTGGCCCAAAAACTCCTCAGCCAGATCTATGTTGATGCCGG
GGAAAGCGATCTCGCCCGCCGGTGCCTGGAGATTATCCTTTCACTCAGCCCTGGCGATCTGGAAAGCAAGCTCATGCTTG
ACGCCATGTGCCGACAGCCCCGTGAAAATGCCGACCGCGCCGACGATCTTTTTAACGAGATGGGCGCCGCTGCCGCCATT
GATCTGGAAGATGAGTCGCTCCTGGAAGAGATCGAGATTATTGAAGAACTGGTAGACGAAGTTGTCGACGAGGAAGATTT
GGCAGCTTTTACGGCACATGCGCCGCCCCCTCCGCTTGCAGAAGAGTCGTTCGCGGATGTTCTTCTCGATGAAGAGCCCG
TCGCGAACGCCGACGTTCCGAGCCCGCGCGATGTCCTGAGTACCGGAACCGTCGCGGATCTGTACATAGCCCAGGGGTTC
CCCAAGAAAGCGCTTGCCATCTATCGCGACCTGCTGGATGCCGATCCCCTTAATGAGGATATCCGCAACCGGATGGTGGA
CCTCAAGAAGCGCATCGATGAAGATGAGGCCCGCGCCCGCGAATCTGTCCTGGCAGAAGCTGTTTCCGCTACCGATACGA
CGGCCCAAATCCAGGGAGACTTGACCGCGGATAGGGAGGCTTTCAAGGAAGAGGCGGCTTCCGGTTTTGCCGTCGAGTCG
GCACATGAGGTCGATATTCCTCTGGAGGTCGCTGTGTCGGCCGAGTCGTCGCTCAACGTTGCAGAGGAGAAAGAGGCTTC
TGCGGCCCATGTGGTTTCTGCGCTCGAAGGATGGCTCGATTCCATTCGGAGGATACGCCAATGCCGTTCAGTGCTGCACT
GA

Upstream 100 bases:

>100_bases
GGCTGGACTTCGTACTCAACCGGGGAATAGGCGGCCATGAGATCGTCAGGATCGAAAACCTGTCTGAAGTATTCGGCATC
TGCGGCGTGGGGGAATGACC

Downstream 100 bases:

>100_bases
AGCAGATCGTCGAAGGGGTCGAGGGGGGGCTGGGTGCGGCCATCATGGGCTACGACGGTATCCATATCGACGAGTATCTC
AGGGAAGATCCTCCCATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Domain Protein; TPR Domain-Containing Protein

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MEHGTESFWTDIKRYEDILAKDPGSYCFAPLSELYRKVGLLDDAIMTARTGIGQHPEYVGGYMALGRACFEKGERTESRA
ALEKVVRVTPDNLLAQKLLSQIYVDAGESDLARRCLEIILSLSPGDLESKLMLDAMCRQPRENADRADDLFNEMGAAAAI
DLEDESLLEEIEIIEELVDEVVDEEDLAAFTAHAPPPPLAEESFADVLLDEEPVANADVPSPRDVLSTGTVADLYIAQGF
PKKALAIYRDLLDADPLNEDIRNRMVDLKKRIDEDEARARESVLAEAVSATDTTAQIQGDLTADREAFKEEAASGFAVES
AHEVDIPLEVAVSAESSLNVAEEKEASAAHVVSALEGWLDSIRRIRQCRSVLH

Sequences:

>Translated_373_residues
MEHGTESFWTDIKRYEDILAKDPGSYCFAPLSELYRKVGLLDDAIMTARTGIGQHPEYVGGYMALGRACFEKGERTESRA
ALEKVVRVTPDNLLAQKLLSQIYVDAGESDLARRCLEIILSLSPGDLESKLMLDAMCRQPRENADRADDLFNEMGAAAAI
DLEDESLLEEIEIIEELVDEVVDEEDLAAFTAHAPPPPLAEESFADVLLDEEPVANADVPSPRDVLSTGTVADLYIAQGF
PKKALAIYRDLLDADPLNEDIRNRMVDLKKRIDEDEARARESVLAEAVSATDTTAQIQGDLTADREAFKEEAASGFAVES
AHEVDIPLEVAVSAESSLNVAEEKEASAAHVVSALEGWLDSIRRIRQCRSVLH
>Mature_373_residues
MEHGTESFWTDIKRYEDILAKDPGSYCFAPLSELYRKVGLLDDAIMTARTGIGQHPEYVGGYMALGRACFEKGERTESRA
ALEKVVRVTPDNLLAQKLLSQIYVDAGESDLARRCLEIILSLSPGDLESKLMLDAMCRQPRENADRADDLFNEMGAAAAI
DLEDESLLEEIEIIEELVDEVVDEEDLAAFTAHAPPPPLAEESFADVLLDEEPVANADVPSPRDVLSTGTVADLYIAQGF
PKKALAIYRDLLDADPLNEDIRNRMVDLKKRIDEDEARARESVLAEAVSATDTTAQIQGDLTADREAFKEEAASGFAVES
AHEVDIPLEVAVSAESSLNVAEEKEASAAHVVSALEGWLDSIRRIRQCRSVLH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40975; Mature: 40975

Theoretical pI: Translated: 4.09; Mature: 4.09

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHGTESFWTDIKRYEDILAKDPGSYCFAPLSELYRKVGLLDDAIMTARTGIGQHPEYVG
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHH
GYMALGRACFEKGERTESRAALEKVVRVTPDNLLAQKLLSQIYVDAGESDLARRCLEIIL
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
SLSPGDLESKLMLDAMCRQPRENADRADDLFNEMGAAAAIDLEDESLLEEIEIIEELVDE
HCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHH
VVDEEDLAAFTAHAPPPPLAEESFADVLLDEEPVANADVPSPRDVLSTGTVADLYIAQGF
HHCHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCHHHHHHHCCC
PKKALAIYRDLLDADPLNEDIRNRMVDLKKRIDEDEARARESVLAEAVSATDTTAQIQGD
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHCCC
LTADREAFKEEAASGFAVESAHEVDIPLEVAVSAESSLNVAEEKEASAAHVVSALEGWLD
CHHHHHHHHHHHHCCCEECCCCCCCCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
SIRRIRQCRSVLH
HHHHHHHHHHHCC
>Mature Secondary Structure
MEHGTESFWTDIKRYEDILAKDPGSYCFAPLSELYRKVGLLDDAIMTARTGIGQHPEYVG
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHH
GYMALGRACFEKGERTESRAALEKVVRVTPDNLLAQKLLSQIYVDAGESDLARRCLEIIL
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
SLSPGDLESKLMLDAMCRQPRENADRADDLFNEMGAAAAIDLEDESLLEEIEIIEELVDE
HCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHH
VVDEEDLAAFTAHAPPPPLAEESFADVLLDEEPVANADVPSPRDVLSTGTVADLYIAQGF
HHCHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCHHHHHHHCCC
PKKALAIYRDLLDADPLNEDIRNRMVDLKKRIDEDEARARESVLAEAVSATDTTAQIQGD
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHCCC
LTADREAFKEEAASGFAVESAHEVDIPLEVAVSAESSLNVAEEKEASAAHVVSALEGWLD
CHHHHHHHHHHHHCCCEECCCCCCCCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
SIRRIRQCRSVLH
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA