| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39996997
Identifier: 39996997
GI number: 39996997
Start: 2076665
End: 2077714
Strand: Reverse
Name: 39996997
Synonym: GSU1899
Alternate gene names: NA
Gene position: 2077714-2076665 (Counterclockwise)
Preceding gene: 39996998
Following gene: 39996996
Centisome position: 54.47
GC content: 56.0
Gene sequence:
>1050_bases ATGGCGTTGTCGACTGAAAAGAAGGTGGGTTTTTTCTTCATGGCCGGATTGGTGGTCCTGGGGGTGATGCTCGAATTGGG CGAGCGGTGGAACCCCTTTGAGAAGAACCTTCCCTATGTGACCTATCTTTCGAGCACCACCGGCCTCAAGGTGGGAGACC CTGTTCGGCTGGCTGGCGTTGAGGTCGGGAAGATTACCCGGATCGATATCGAGGACGGCAGAGTGAAGGTCGGTTTCGAG GTCAAACCCGGGACCCGGATCAAAACCGACTCGGTGGCGACCATCCGGCTTACGAACCTTCTGGGGGGACAGTTTCTGGG GATTTCCTTTGGTACCCAGACCGCCGACATCCTTGCCCCGGGCTCTGAGGTGAAGAGCCGGGAAATTGCCAATATCGACA TCATTGTCGACAACGTGAGCGACCTGACCAAGGACGCGCGGACGTTCCTCAATGATCTGAACACCAACCAGAACGAGGTC CTGGGAAAAATCTCGACCATGCTCGACGAGAACAGGGGGAACCTCAAGGGGGCGGTCCAGAATCTCAACAGTATCACCGC AAAGATGGACCGTGGCGAAGGCTCGCTTGCAATGCTGCTGAATGACAAGGCCCTCTATCAAAACACCAATGAGCTTGCCA CGAGCCTTAAGACCGTCACCGGGAAGATAGAGCGTGGCGAGGGTTCGCTGGGCAAGCTGGTAAACGAGGATGCTCTGTAT GTCGAAGCTAAGGGAGCGTTGGCTGAGTTGAACGCGGGCGCAAAAGATATCAAGGAAATCGCCGCCAAGATCAACAAGGG TGAGGGGAGCGTCGGCAAACTCGTTCATGACGAGGCTCTCTATAACGAGCTGCGTGACGCATCCAAAAACATCAGTGACG TGGCGCGCAAAATCAACGAAGGGCAGGGCACCCTTGGCAAGCTGGTGAACGACGACAAGCTCTACCGTGATACAGCCGCA GCCATGAAGAAACTGGACAAGGCAGCCGACGGGCTCTCCGATTCGGGGCCGATTTCGGTGCTTGGAAGTGTTGTCGGTAC GCTGTTTTAA
Upstream 100 bases:
>100_bases GTCGTTCATGTTGATTCTGGTGGCCGATTATTTCCTCACCAGGATTCTGATGTAACTAAGATGAGTAGTACGGCCTGTCG GGTGATGGGGAGGAGAGTTC
Downstream 100 bases:
>100_bases CAGGTAACAGCTGAAGCAATGCTGTAACTATTTGTGCGCGGAGCCGTCTGGTGCGGCTCCGCGTTTGTTCGTCAGGAGGA TGTATGGAAGACGTTCTACG
Product: virulence factor Mce family protein
Products: NA
Alternate protein names: Mce Family Protein; Virulence Factor Mce Family Protein; Mce-Related Protein; Mce Related Protein; Virulence Factor MCE-Like Protein-Related Protein; Mammalian Cell Entry Related Domain-Containing Protein; MCE Family Protein; ABC-Type Transport System
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MALSTEKKVGFFFMAGLVVLGVMLELGERWNPFEKNLPYVTYLSSTTGLKVGDPVRLAGVEVGKITRIDIEDGRVKVGFE VKPGTRIKTDSVATIRLTNLLGGQFLGISFGTQTADILAPGSEVKSREIANIDIIVDNVSDLTKDARTFLNDLNTNQNEV LGKISTMLDENRGNLKGAVQNLNSITAKMDRGEGSLAMLLNDKALYQNTNELATSLKTVTGKIERGEGSLGKLVNEDALY VEAKGALAELNAGAKDIKEIAAKINKGEGSVGKLVHDEALYNELRDASKNISDVARKINEGQGTLGKLVNDDKLYRDTAA AMKKLDKAADGLSDSGPISVLGSVVGTLF
Sequences:
>Translated_349_residues MALSTEKKVGFFFMAGLVVLGVMLELGERWNPFEKNLPYVTYLSSTTGLKVGDPVRLAGVEVGKITRIDIEDGRVKVGFE VKPGTRIKTDSVATIRLTNLLGGQFLGISFGTQTADILAPGSEVKSREIANIDIIVDNVSDLTKDARTFLNDLNTNQNEV LGKISTMLDENRGNLKGAVQNLNSITAKMDRGEGSLAMLLNDKALYQNTNELATSLKTVTGKIERGEGSLGKLVNEDALY VEAKGALAELNAGAKDIKEIAAKINKGEGSVGKLVHDEALYNELRDASKNISDVARKINEGQGTLGKLVNDDKLYRDTAA AMKKLDKAADGLSDSGPISVLGSVVGTLF >Mature_348_residues ALSTEKKVGFFFMAGLVVLGVMLELGERWNPFEKNLPYVTYLSSTTGLKVGDPVRLAGVEVGKITRIDIEDGRVKVGFEV KPGTRIKTDSVATIRLTNLLGGQFLGISFGTQTADILAPGSEVKSREIANIDIIVDNVSDLTKDARTFLNDLNTNQNEVL GKISTMLDENRGNLKGAVQNLNSITAKMDRGEGSLAMLLNDKALYQNTNELATSLKTVTGKIERGEGSLGKLVNEDALYV EAKGALAELNAGAKDIKEIAAKINKGEGSVGKLVHDEALYNELRDASKNISDVARKINEGQGTLGKLVNDDKLYRDTAAA MKKLDKAADGLSDSGPISVLGSVVGTLF
Specific function: Unknown
COG id: COG1463
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37334; Mature: 37203
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALSTEKKVGFFFMAGLVVLGVMLELGERWNPFEKNLPYVTYLSSTTGLKVGDPVRLAGV CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEEEEECCCCCCCCCCCEEEECE EVGKITRIDIEDGRVKVGFEVKPGTRIKTDSVATIRLTNLLGGQFLGISFGTQTADILAP EECCEEEEEECCCEEEEEEEECCCCEEECCCEEEEEEEHHCCCEEEEEECCCCCHHHCCC GSEVKSREIANIDIIVDNVSDLTKDARTFLNDLNTNQNEVLGKISTMLDENRGNLKGAVQ CCHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHH NLNSITAKMDRGEGSLAMLLNDKALYQNTNELATSLKTVTGKIERGEGSLGKLVNEDALY HHHHHHHHHCCCCCCEEEEECCHHHHCCHHHHHHHHHHHHCCEECCCCHHHHHCCCCEEE VEAKGALAELNAGAKDIKEIAAKINKGEGSVGKLVHDEALYNELRDASKNISDVARKINE EEECCCHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC GQGTLGKLVNDDKLYRDTAAAMKKLDKAADGLSDSGPISVLGSVVGTLF CCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure ALSTEKKVGFFFMAGLVVLGVMLELGERWNPFEKNLPYVTYLSSTTGLKVGDPVRLAGV CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEEEEECCCCCCCCCCCEEEECE EVGKITRIDIEDGRVKVGFEVKPGTRIKTDSVATIRLTNLLGGQFLGISFGTQTADILAP EECCEEEEEECCCEEEEEEEECCCCEEECCCEEEEEEEHHCCCEEEEEECCCCCHHHCCC GSEVKSREIANIDIIVDNVSDLTKDARTFLNDLNTNQNEVLGKISTMLDENRGNLKGAVQ CCHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHH NLNSITAKMDRGEGSLAMLLNDKALYQNTNELATSLKTVTGKIERGEGSLGKLVNEDALY HHHHHHHHHCCCCCCEEEEECCHHHHCCHHHHHHHHHHHHCCEECCCCHHHHHCCCCEEE VEAKGALAELNAGAKDIKEIAAKINKGEGSVGKLVHDEALYNELRDASKNISDVARKINE EEECCCHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC GQGTLGKLVNDDKLYRDTAAAMKKLDKAADGLSDSGPISVLGSVVGTLF CCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA