Click here to switch to the map view.

The map label for this gene is 39996944

Identifier: 39996944

GI number: 39996944

Start: 2015325

End: 2016974

Strand: Reverse

Name: 39996944

Synonym: GSU1845

Alternate gene names: NA

Gene position: 2016974-2015325 (Counterclockwise)

Preceding gene: 39996945

Following gene: 39996943

Centisome position: 52.88

GC content: 57.21

Gene sequence:

>1650_bases
ATGAATCGTATTCCGCTCGGACTGTTGATTGCACTGCTGATTCTCCCTGTGTTCCCCGGTTATGTCTGGGCACTCGCCTC
GAGCAACATCCCTCTTGACAGTCCTGTCTATCTATACTTGGATAAACTTGCCGGCTTTGGCTTGATTACCTCTGATACCA
AGGGGATCAGACCATACTCGAAGGCCGAAACGGCCCGGCTTCTCCTGGAGGCTGAGGCGAATCTCGTGAAAAACGAAGAA
CAGATTCCCCCGCTGGCTTTCGAGTTTATCAAGCGCATCCGGGAGTTGATACCCAGGGAAGCATCTCTGAGGGAAGAGCC
GGAAAAGGCGCCTTTGGTGGATTATACGCCGGTGACTTCCGCCCGGTTGCGGTATGTGTACCTGGATGGACAGCCCCGCA
GTTACAATCGGGATGTGCTCGACCCTGCGAATCAGTCCGCGTTCGGATTCATCGGCGGGAATCTGAGACCTCAGCCCCCC
GGAGTGGTTCACCAGTCCGGAACCGAGGGTACCCCTCTGGTGGAGAATAACGAGGGGGTTGTCTATGGCGACGGACATAA
CCTTGAGTTCCGCTGGAGCATGGAAGGATACCTCGGCCGCTATGCAACCGTACTGGTGGAGCCGAACGCATTGCACACGG
ACGAAACCAACCGGCTGAGCCTGCAGAAGGGATATCTGAAGCTCGGGAGCGGTGGAATCGAGTTGGAGGTCGGGCGCGAT
GCCAACTGGTTCGGGCCGGGCTATCGCGGCGCCACGACTCTCACCAATAATGCCGCCAACTTCGACATGGTCAAGCTTTC
AAGCCCAGAGCCCGTTGATGTGGGCTGGATCAAGGAGTACCTGGGTGACTTCAAGTATGCCCTGATCGGTTCGCGTTTCG
ATGCTACGGGGAGTGGCGCCGATTACCGGAAGCCGTGGTTTTTCGGGATGAAGCTGACTCTTAAGCCGAAGCCCTGGTTA
GAGATCGGCGCGAACCTGGTGCGCCAGGAGGGTGGACCGGGATTCACGGGCGATGTGAGCCTATTCGATCAGATTTTCGG
CGGCGCCGATAACGATCATGTGAACTCGATTGCAGGTATCGACCTGCGCGTCAGGATTCCCTGGCTGCGCAACACGGAGA
TTTACGGCGAGTATTCGGGTGAAGACTCGGCATCGTTCTGGCCGTTTGTGGAAAGCTATGTGGCCGGTATCTATATTCCC
TGTTTGACGCCTTCCGGGCGAGATGACCTGCGGTTCGAGTACTATCGGGGAAGTGTCATCCACTATACCGACTGGCAGTT
TCCGGCCGGCTACGTCTATAAGGGGATGACCCCCGGGCATTCGCAGGGGGGGGCGGCAGAGGAGTTTTTCATCCGGTACA
GTCACTGGTTCTCGGCCCGCAACTCGCTGGCACTGGAATATTTTCACACCGAGCGGGGACAGGAAGGGCGCCTGAAGGTC
AACAGCGCCGGCAGGTATGATCCGGTAAACGGGGTCATGCAGGCTGTTGAACGGAAAGATGCGCTCCGCGCTTTCTGGAG
TCTGCCGTTTTACGGCGATGTCGATCTTAACGTTAATTACGGCTGGGAGCGGATTTCCAACGTGGATCTCGTGCTGGGCA
ACGACCGGACCAATCAGCTCGTGACCCTGGCACTCACCTACCGGTATTGA

Upstream 100 bases:

>100_bases
TTTCTCTGCATTTCATGCTAGCATCGGCTCGTAATCGCTAATAAATTCAGCATATAATGCCGTGTTGAACCGTTCATATC
CCTCTTGAGTAAGTGACCCA

Downstream 100 bases:

>100_bases
CCCCCCCCCCCACGATTATCCACTATTTCCGCTATTCATTATAAATGATCACCGCCCCGGTCGGGGCTCCTTTGCGTTCG
GTAGAACACCCTCCCCATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 549; Mature: 549

Protein sequence:

>549_residues
MNRIPLGLLIALLILPVFPGYVWALASSNIPLDSPVYLYLDKLAGFGLITSDTKGIRPYSKAETARLLLEAEANLVKNEE
QIPPLAFEFIKRIRELIPREASLREEPEKAPLVDYTPVTSARLRYVYLDGQPRSYNRDVLDPANQSAFGFIGGNLRPQPP
GVVHQSGTEGTPLVENNEGVVYGDGHNLEFRWSMEGYLGRYATVLVEPNALHTDETNRLSLQKGYLKLGSGGIELEVGRD
ANWFGPGYRGATTLTNNAANFDMVKLSSPEPVDVGWIKEYLGDFKYALIGSRFDATGSGADYRKPWFFGMKLTLKPKPWL
EIGANLVRQEGGPGFTGDVSLFDQIFGGADNDHVNSIAGIDLRVRIPWLRNTEIYGEYSGEDSASFWPFVESYVAGIYIP
CLTPSGRDDLRFEYYRGSVIHYTDWQFPAGYVYKGMTPGHSQGGAAEEFFIRYSHWFSARNSLALEYFHTERGQEGRLKV
NSAGRYDPVNGVMQAVERKDALRAFWSLPFYGDVDLNVNYGWERISNVDLVLGNDRTNQLVTLALTYRY

Sequences:

>Translated_549_residues
MNRIPLGLLIALLILPVFPGYVWALASSNIPLDSPVYLYLDKLAGFGLITSDTKGIRPYSKAETARLLLEAEANLVKNEE
QIPPLAFEFIKRIRELIPREASLREEPEKAPLVDYTPVTSARLRYVYLDGQPRSYNRDVLDPANQSAFGFIGGNLRPQPP
GVVHQSGTEGTPLVENNEGVVYGDGHNLEFRWSMEGYLGRYATVLVEPNALHTDETNRLSLQKGYLKLGSGGIELEVGRD
ANWFGPGYRGATTLTNNAANFDMVKLSSPEPVDVGWIKEYLGDFKYALIGSRFDATGSGADYRKPWFFGMKLTLKPKPWL
EIGANLVRQEGGPGFTGDVSLFDQIFGGADNDHVNSIAGIDLRVRIPWLRNTEIYGEYSGEDSASFWPFVESYVAGIYIP
CLTPSGRDDLRFEYYRGSVIHYTDWQFPAGYVYKGMTPGHSQGGAAEEFFIRYSHWFSARNSLALEYFHTERGQEGRLKV
NSAGRYDPVNGVMQAVERKDALRAFWSLPFYGDVDLNVNYGWERISNVDLVLGNDRTNQLVTLALTYRY
>Mature_549_residues
MNRIPLGLLIALLILPVFPGYVWALASSNIPLDSPVYLYLDKLAGFGLITSDTKGIRPYSKAETARLLLEAEANLVKNEE
QIPPLAFEFIKRIRELIPREASLREEPEKAPLVDYTPVTSARLRYVYLDGQPRSYNRDVLDPANQSAFGFIGGNLRPQPP
GVVHQSGTEGTPLVENNEGVVYGDGHNLEFRWSMEGYLGRYATVLVEPNALHTDETNRLSLQKGYLKLGSGGIELEVGRD
ANWFGPGYRGATTLTNNAANFDMVKLSSPEPVDVGWIKEYLGDFKYALIGSRFDATGSGADYRKPWFFGMKLTLKPKPWL
EIGANLVRQEGGPGFTGDVSLFDQIFGGADNDHVNSIAGIDLRVRIPWLRNTEIYGEYSGEDSASFWPFVESYVAGIYIP
CLTPSGRDDLRFEYYRGSVIHYTDWQFPAGYVYKGMTPGHSQGGAAEEFFIRYSHWFSARNSLALEYFHTERGQEGRLKV
NSAGRYDPVNGVMQAVERKDALRAFWSLPFYGDVDLNVNYGWERISNVDLVLGNDRTNQLVTLALTYRY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61552; Mature: 61552

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRIPLGLLIALLILPVFPGYVWALASSNIPLDSPVYLYLDKLAGFGLITSDTKGIRPYS
CCCCCHHHHHHHHHHHHCCCCEEHEECCCCCCCCCHHEEEEHHCCCEEEECCCCCCCCCC
KAETARLLLEAEANLVKNEEQIPPLAFEFIKRIRELIPREASLREEPEKAPLVDYTPVTS
HHHHHHEEEEHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCEEEECCCCC
ARLRYVYLDGQPRSYNRDVLDPANQSAFGFIGGNLRPQPPGVVHQSGTEGTPLVENNEGV
CEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEECCCCCCCCEEECCCEE
VYGDGHNLEFRWSMEGYLGRYATVLVEPNALHTDETNRLSLQKGYLKLGSGGIELEVGRD
EEECCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEECCEEEECCCCEEEEECCC
ANWFGPGYRGATTLTNNAANFDMVKLSSPEPVDVGWIKEYLGDFKYALIGSRFDATGSGA
CCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCHHHHHHHHCCEEEEEECCCCCCCCCCC
DYRKPWFFGMKLTLKPKPWLEIGANLVRQEGGPGFTGDVSLFDQIFGGADNDHVNSIAGI
CCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCEEECE
DLRVRIPWLRNTEIYGEYSGEDSASFWPFVESYVAGIYIPCLTPSGRDDLRFEYYRGSVI
EEEEEECCEECCEEEEEECCCCCCCCHHHHHHHHCEEEEEECCCCCCCCCEEEEECCCEE
HYTDWQFPAGYVYKGMTPGHSQGGAAEEFFIRYSHWFSARNSLALEYFHTERGQEGRLKV
EEECCCCCCCEEEECCCCCCCCCCCHHHHHEEHHHHHCCCCCEEEEEEECCCCCCCEEEE
NSAGRYDPVNGVMQAVERKDALRAFWSLPFYGDVDLNVNYGWERISNVDLVLGNDRTNQL
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHCCEEEEECCCCCCEE
VTLALTYRY
EEEEEEECC
>Mature Secondary Structure
MNRIPLGLLIALLILPVFPGYVWALASSNIPLDSPVYLYLDKLAGFGLITSDTKGIRPYS
CCCCCHHHHHHHHHHHHCCCCEEHEECCCCCCCCCHHEEEEHHCCCEEEECCCCCCCCCC
KAETARLLLEAEANLVKNEEQIPPLAFEFIKRIRELIPREASLREEPEKAPLVDYTPVTS
HHHHHHEEEEHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCEEEECCCCC
ARLRYVYLDGQPRSYNRDVLDPANQSAFGFIGGNLRPQPPGVVHQSGTEGTPLVENNEGV
CEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEECCCCCCCCEEECCCEE
VYGDGHNLEFRWSMEGYLGRYATVLVEPNALHTDETNRLSLQKGYLKLGSGGIELEVGRD
EEECCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEECCEEEECCCCEEEEECCC
ANWFGPGYRGATTLTNNAANFDMVKLSSPEPVDVGWIKEYLGDFKYALIGSRFDATGSGA
CCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCHHHHHHHHCCEEEEEECCCCCCCCCCC
DYRKPWFFGMKLTLKPKPWLEIGANLVRQEGGPGFTGDVSLFDQIFGGADNDHVNSIAGI
CCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCEEECE
DLRVRIPWLRNTEIYGEYSGEDSASFWPFVESYVAGIYIPCLTPSGRDDLRFEYYRGSVI
EEEEEECCEECCEEEEEECCCCCCCCHHHHHHHHCEEEEEECCCCCCCCCEEEEECCCEE
HYTDWQFPAGYVYKGMTPGHSQGGAAEEFFIRYSHWFSARNSLALEYFHTERGQEGRLKV
EEECCCCCCCEEEECCCCCCCCCCCHHHHHEEHHHHHCCCCCEEEEEEECCCCCCCEEEE
NSAGRYDPVNGVMQAVERKDALRAFWSLPFYGDVDLNVNYGWERISNVDLVLGNDRTNQL
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHCCEEEEECCCCCCEE
VTLALTYRY
EEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA