Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

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The map label for this gene is apgM

Identifier: 39996917

GI number: 39996917

Start: 1983644

End: 1984843

Strand: Reverse

Name: apgM

Synonym: GSU1818

Alternate gene names: 39996917

Gene position: 1984843-1983644 (Counterclockwise)

Preceding gene: 39996918

Following gene: 39996915

Centisome position: 52.04

GC content: 60.75

Gene sequence:

>1200_bases
ATGAAGTACATTGTGTTACTCGGAGATGGCATGTCCGATGAGCCGATGCAGGAGTTGGGCGGGAAAACGCCGCTCCAGGC
GGCACGGACTCCCCATATGGACGCCATGGCACGGCGGGGCAGGATCGGTCTCGCCCGTACCGTGCCGGAGGGATATCCCC
CCGGCAGCGATGTGGCTAACCTTTCGGTGTTCGGTTATGATCCCCGCGCCTGCTACACTGGGCGTTCGCCCCTGGAAGCT
GCCAGCATGGGAGTAGAACTGGGCTCTGCCGACGTTGCTTTTCGGGTGAATCTGGTGAACCTGGCACCGACCCGCGGTAC
GCTCGTCATGAATGATTATTCGGCCGGTCACATTTCCACCGCCGAGGGCCGGGAGCTCATCGAGGCGATCCAGGGCGTAA
TGGGCACGGATGAATTCCAGTTTTATCCCGGGGTCGGCTACCGTCATCTCATGGTCTGGCGCAATGGGAAATGCGGCATG
ACTGTGGTCCCCCCTCACGATATTTCCGGGCAGAGCATCCTTGAACACCTGCCAAAGGGGGAGGGGGCGGAGCGACTGAT
AGAGCTCATGAACTCCTCGCAGCTCGTGCTCAACAATCATCCCCAGTATCGGCGCCGGCTCGAAGAGGGAAAGGTTCCCG
CAAACTCCATCTGGCTCTGGGGGCATGGCAAGGCGCCCCGGATGGCATCTTTCCACGAAAAGTTCGGCCTTACGGGCGCC
GTCATTTCCGCGGTGGACCTGGTGCGCGGCATCGGCGTGTGCGCCGGTCTGGACGTGATCAAAGTTGAAGGCGCCACCGG
TTATATCGATACCAATTACGAGGGAAAGGTAACTGCTGCTCTTGAGGCGCTGGAGGCGCACGATTACGTCTATCTCCACG
TGGAAGCCCCCGATGAGGCGGGTCACGGCGGCAACCTGGAGCACAAGCTGAAGGCCATCGAAGATTTCGATGCCCGGGTC
GTGGGTCCAATTATGGCGGGCATGGAAAAGTTCGGATCGTACCGAATCCTCTGCACACCGGATCACCCGACGCCGTTGCG
GCTCAAGACTCACACCGACGCTCCGGTTCCGTTCGTCCTCTTCAGCGGGGAAACCTCGGAGAACGCCGGCGTGGCCGGTT
ACGACGAAGAGTCGGCCAGATCAGCCGGCTTGGTGGTCGAGGACGGCTTCAGACTCATGGAGATGATGCTGGACCGATAG

Upstream 100 bases:

>100_bases
GTCTGCACGAACAATTCCACCCGCGCGGCTGAAACGTCGGCCAGGGGGCGGAGATGATAACGTGAAGTGAAATCGTGATC
CTGTGATGAAAGGAACTGGC

Downstream 100 bases:

>100_bases
GGGGAACACGGAAGGGGCGGTCGCAAAGACCGCCCCTTCTTGATTCGACGCGAGGGAGGGTGCTCACCACCTGCGGTAGA
CGGGACCGAGCGGGCGGTGC

Product: cofactor-independent phosphoglycerate mutase

Products: NA

Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; aPGAM

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MKYIVLLGDGMSDEPMQELGGKTPLQAARTPHMDAMARRGRIGLARTVPEGYPPGSDVANLSVFGYDPRACYTGRSPLEA
ASMGVELGSADVAFRVNLVNLAPTRGTLVMNDYSAGHISTAEGRELIEAIQGVMGTDEFQFYPGVGYRHLMVWRNGKCGM
TVVPPHDISGQSILEHLPKGEGAERLIELMNSSQLVLNNHPQYRRRLEEGKVPANSIWLWGHGKAPRMASFHEKFGLTGA
VISAVDLVRGIGVCAGLDVIKVEGATGYIDTNYEGKVTAALEALEAHDYVYLHVEAPDEAGHGGNLEHKLKAIEDFDARV
VGPIMAGMEKFGSYRILCTPDHPTPLRLKTHTDAPVPFVLFSGETSENAGVAGYDEESARSAGLVVEDGFRLMEMMLDR

Sequences:

>Translated_399_residues
MKYIVLLGDGMSDEPMQELGGKTPLQAARTPHMDAMARRGRIGLARTVPEGYPPGSDVANLSVFGYDPRACYTGRSPLEA
ASMGVELGSADVAFRVNLVNLAPTRGTLVMNDYSAGHISTAEGRELIEAIQGVMGTDEFQFYPGVGYRHLMVWRNGKCGM
TVVPPHDISGQSILEHLPKGEGAERLIELMNSSQLVLNNHPQYRRRLEEGKVPANSIWLWGHGKAPRMASFHEKFGLTGA
VISAVDLVRGIGVCAGLDVIKVEGATGYIDTNYEGKVTAALEALEAHDYVYLHVEAPDEAGHGGNLEHKLKAIEDFDARV
VGPIMAGMEKFGSYRILCTPDHPTPLRLKTHTDAPVPFVLFSGETSENAGVAGYDEESARSAGLVVEDGFRLMEMMLDR
>Mature_399_residues
MKYIVLLGDGMSDEPMQELGGKTPLQAARTPHMDAMARRGRIGLARTVPEGYPPGSDVANLSVFGYDPRACYTGRSPLEA
ASMGVELGSADVAFRVNLVNLAPTRGTLVMNDYSAGHISTAEGRELIEAIQGVMGTDEFQFYPGVGYRHLMVWRNGKCGM
TVVPPHDISGQSILEHLPKGEGAERLIELMNSSQLVLNNHPQYRRRLEEGKVPANSIWLWGHGKAPRMASFHEKFGLTGA
VISAVDLVRGIGVCAGLDVIKVEGATGYIDTNYEGKVTAALEALEAHDYVYLHVEAPDEAGHGGNLEHKLKAIEDFDARV
VGPIMAGMEKFGSYRILCTPDHPTPLRLKTHTDAPVPFVLFSGETSENAGVAGYDEESARSAGLVVEDGFRLMEMMLDR

Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate

COG id: COG3635

COG function: function code G; Predicted phosphoglycerate mutase, AP superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BPG-independent phosphoglycerate mutase family. A-PGAM subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): APGM_GEOSL (Q74C57)

Other databases:

- EMBL:   AE017180
- RefSeq:   NP_952868.1
- ProteinModelPortal:   Q74C57
- SMR:   Q74C57
- GeneID:   2686266
- GenomeReviews:   AE017180_GR
- KEGG:   gsu:GSU1818
- NMPDR:   fig|243231.1.peg.1806
- TIGR:   GSU1818
- HOGENOM:   HBG463247
- OMA:   DYSAGHI
- ProtClustDB:   PRK04200
- BioCyc:   GSUL243231:GSU_1818-MONOMER
- BRENDA:   5.4.2.1
- GO:   GO:0006096
- HAMAP:   MF_01402_B
- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR004456
- InterPro:   IPR013371
- InterPro:   IPR006124
- Gene3D:   G3DSA:3.40.720.10
- PIRSF:   PIRSF006392
- TIGRFAMs:   TIGR00306
- TIGRFAMs:   TIGR02535

Pfam domain/function: PF01676 Metalloenzyme; PF10143 PhosphMutase; SSF53649 Alkaline_phosphatase_core

EC number: =5.4.2.1

Molecular weight: Translated: 43250; Mature: 43250

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYIVLLGDGMSDEPMQELGGKTPLQAARTPHMDAMARRGRIGLARTVPEGYPPGSDVAN
CEEEEEECCCCCCCHHHHHCCCCCCHHCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCCE
LSVFGYDPRACYTGRSPLEAASMGVELGSADVAFRVNLVNLAPTRGTLVMNDYSAGHIST
EEEEECCCCCEECCCCCHHHHHCCCCCCCCCEEEEEEEEEECCCCCEEEEECCCCCCCCC
AEGRELIEAIQGVMGTDEFQFYPGVGYRHLMVWRNGKCGMTVVPPHDISGQSILEHLPKG
HHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEEECCCCCEEEECCCCCCHHHHHHHCCCC
EGAERLIELMNSSQLVLNNHPQYRRRLEEGKVPANSIWLWGHGKAPRMASFHEKFGLTGA
CCHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHCCHHH
VISAVDLVRGIGVCAGLDVIKVEGATGYIDTNYEGKVTAALEALEAHDYVYLHVEAPDEA
HHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCCCHHHHHHHHHCCCEEEEEEECCCCC
GHGGNLEHKLKAIEDFDARVVGPIMAGMEKFGSYRILCTPDHPTPLRLKTHTDAPVPFVL
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEECCCCCCEEEE
FSGETSENAGVAGYDEESARSAGLVVEDGFRLMEMMLDR
EECCCCCCCCCCCCCCHHHHHCCEEEECCHHHHHHHHCC
>Mature Secondary Structure
MKYIVLLGDGMSDEPMQELGGKTPLQAARTPHMDAMARRGRIGLARTVPEGYPPGSDVAN
CEEEEEECCCCCCCHHHHHCCCCCCHHCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCCE
LSVFGYDPRACYTGRSPLEAASMGVELGSADVAFRVNLVNLAPTRGTLVMNDYSAGHIST
EEEEECCCCCEECCCCCHHHHHCCCCCCCCCEEEEEEEEEECCCCCEEEEECCCCCCCCC
AEGRELIEAIQGVMGTDEFQFYPGVGYRHLMVWRNGKCGMTVVPPHDISGQSILEHLPKG
HHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEEECCCCCEEEECCCCCCHHHHHHHCCCC
EGAERLIELMNSSQLVLNNHPQYRRRLEEGKVPANSIWLWGHGKAPRMASFHEKFGLTGA
CCHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHCCHHH
VISAVDLVRGIGVCAGLDVIKVEGATGYIDTNYEGKVTAALEALEAHDYVYLHVEAPDEA
HHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCCCHHHHHHHHHCCCEEEEEEECCCCC
GHGGNLEHKLKAIEDFDARVVGPIMAGMEKFGSYRILCTPDHPTPLRLKTHTDAPVPFVL
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEECCCCCCEEEE
FSGETSENAGVAGYDEESARSAGLVVEDGFRLMEMMLDR
EECCCCCCCCCCCCCCHHHHHCCEEEECCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA