| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is apgM
Identifier: 39996917
GI number: 39996917
Start: 1983644
End: 1984843
Strand: Reverse
Name: apgM
Synonym: GSU1818
Alternate gene names: 39996917
Gene position: 1984843-1983644 (Counterclockwise)
Preceding gene: 39996918
Following gene: 39996915
Centisome position: 52.04
GC content: 60.75
Gene sequence:
>1200_bases ATGAAGTACATTGTGTTACTCGGAGATGGCATGTCCGATGAGCCGATGCAGGAGTTGGGCGGGAAAACGCCGCTCCAGGC GGCACGGACTCCCCATATGGACGCCATGGCACGGCGGGGCAGGATCGGTCTCGCCCGTACCGTGCCGGAGGGATATCCCC CCGGCAGCGATGTGGCTAACCTTTCGGTGTTCGGTTATGATCCCCGCGCCTGCTACACTGGGCGTTCGCCCCTGGAAGCT GCCAGCATGGGAGTAGAACTGGGCTCTGCCGACGTTGCTTTTCGGGTGAATCTGGTGAACCTGGCACCGACCCGCGGTAC GCTCGTCATGAATGATTATTCGGCCGGTCACATTTCCACCGCCGAGGGCCGGGAGCTCATCGAGGCGATCCAGGGCGTAA TGGGCACGGATGAATTCCAGTTTTATCCCGGGGTCGGCTACCGTCATCTCATGGTCTGGCGCAATGGGAAATGCGGCATG ACTGTGGTCCCCCCTCACGATATTTCCGGGCAGAGCATCCTTGAACACCTGCCAAAGGGGGAGGGGGCGGAGCGACTGAT AGAGCTCATGAACTCCTCGCAGCTCGTGCTCAACAATCATCCCCAGTATCGGCGCCGGCTCGAAGAGGGAAAGGTTCCCG CAAACTCCATCTGGCTCTGGGGGCATGGCAAGGCGCCCCGGATGGCATCTTTCCACGAAAAGTTCGGCCTTACGGGCGCC GTCATTTCCGCGGTGGACCTGGTGCGCGGCATCGGCGTGTGCGCCGGTCTGGACGTGATCAAAGTTGAAGGCGCCACCGG TTATATCGATACCAATTACGAGGGAAAGGTAACTGCTGCTCTTGAGGCGCTGGAGGCGCACGATTACGTCTATCTCCACG TGGAAGCCCCCGATGAGGCGGGTCACGGCGGCAACCTGGAGCACAAGCTGAAGGCCATCGAAGATTTCGATGCCCGGGTC GTGGGTCCAATTATGGCGGGCATGGAAAAGTTCGGATCGTACCGAATCCTCTGCACACCGGATCACCCGACGCCGTTGCG GCTCAAGACTCACACCGACGCTCCGGTTCCGTTCGTCCTCTTCAGCGGGGAAACCTCGGAGAACGCCGGCGTGGCCGGTT ACGACGAAGAGTCGGCCAGATCAGCCGGCTTGGTGGTCGAGGACGGCTTCAGACTCATGGAGATGATGCTGGACCGATAG
Upstream 100 bases:
>100_bases GTCTGCACGAACAATTCCACCCGCGCGGCTGAAACGTCGGCCAGGGGGCGGAGATGATAACGTGAAGTGAAATCGTGATC CTGTGATGAAAGGAACTGGC
Downstream 100 bases:
>100_bases GGGGAACACGGAAGGGGCGGTCGCAAAGACCGCCCCTTCTTGATTCGACGCGAGGGAGGGTGCTCACCACCTGCGGTAGA CGGGACCGAGCGGGCGGTGC
Product: cofactor-independent phosphoglycerate mutase
Products: NA
Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; aPGAM
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MKYIVLLGDGMSDEPMQELGGKTPLQAARTPHMDAMARRGRIGLARTVPEGYPPGSDVANLSVFGYDPRACYTGRSPLEA ASMGVELGSADVAFRVNLVNLAPTRGTLVMNDYSAGHISTAEGRELIEAIQGVMGTDEFQFYPGVGYRHLMVWRNGKCGM TVVPPHDISGQSILEHLPKGEGAERLIELMNSSQLVLNNHPQYRRRLEEGKVPANSIWLWGHGKAPRMASFHEKFGLTGA VISAVDLVRGIGVCAGLDVIKVEGATGYIDTNYEGKVTAALEALEAHDYVYLHVEAPDEAGHGGNLEHKLKAIEDFDARV VGPIMAGMEKFGSYRILCTPDHPTPLRLKTHTDAPVPFVLFSGETSENAGVAGYDEESARSAGLVVEDGFRLMEMMLDR
Sequences:
>Translated_399_residues MKYIVLLGDGMSDEPMQELGGKTPLQAARTPHMDAMARRGRIGLARTVPEGYPPGSDVANLSVFGYDPRACYTGRSPLEA ASMGVELGSADVAFRVNLVNLAPTRGTLVMNDYSAGHISTAEGRELIEAIQGVMGTDEFQFYPGVGYRHLMVWRNGKCGM TVVPPHDISGQSILEHLPKGEGAERLIELMNSSQLVLNNHPQYRRRLEEGKVPANSIWLWGHGKAPRMASFHEKFGLTGA VISAVDLVRGIGVCAGLDVIKVEGATGYIDTNYEGKVTAALEALEAHDYVYLHVEAPDEAGHGGNLEHKLKAIEDFDARV VGPIMAGMEKFGSYRILCTPDHPTPLRLKTHTDAPVPFVLFSGETSENAGVAGYDEESARSAGLVVEDGFRLMEMMLDR >Mature_399_residues MKYIVLLGDGMSDEPMQELGGKTPLQAARTPHMDAMARRGRIGLARTVPEGYPPGSDVANLSVFGYDPRACYTGRSPLEA ASMGVELGSADVAFRVNLVNLAPTRGTLVMNDYSAGHISTAEGRELIEAIQGVMGTDEFQFYPGVGYRHLMVWRNGKCGM TVVPPHDISGQSILEHLPKGEGAERLIELMNSSQLVLNNHPQYRRRLEEGKVPANSIWLWGHGKAPRMASFHEKFGLTGA VISAVDLVRGIGVCAGLDVIKVEGATGYIDTNYEGKVTAALEALEAHDYVYLHVEAPDEAGHGGNLEHKLKAIEDFDARV VGPIMAGMEKFGSYRILCTPDHPTPLRLKTHTDAPVPFVLFSGETSENAGVAGYDEESARSAGLVVEDGFRLMEMMLDR
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
COG id: COG3635
COG function: function code G; Predicted phosphoglycerate mutase, AP superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family. A-PGAM subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): APGM_GEOSL (Q74C57)
Other databases:
- EMBL: AE017180 - RefSeq: NP_952868.1 - ProteinModelPortal: Q74C57 - SMR: Q74C57 - GeneID: 2686266 - GenomeReviews: AE017180_GR - KEGG: gsu:GSU1818 - NMPDR: fig|243231.1.peg.1806 - TIGR: GSU1818 - HOGENOM: HBG463247 - OMA: DYSAGHI - ProtClustDB: PRK04200 - BioCyc: GSUL243231:GSU_1818-MONOMER - BRENDA: 5.4.2.1 - GO: GO:0006096 - HAMAP: MF_01402_B - InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR004456 - InterPro: IPR013371 - InterPro: IPR006124 - Gene3D: G3DSA:3.40.720.10 - PIRSF: PIRSF006392 - TIGRFAMs: TIGR00306 - TIGRFAMs: TIGR02535
Pfam domain/function: PF01676 Metalloenzyme; PF10143 PhosphMutase; SSF53649 Alkaline_phosphatase_core
EC number: =5.4.2.1
Molecular weight: Translated: 43250; Mature: 43250
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYIVLLGDGMSDEPMQELGGKTPLQAARTPHMDAMARRGRIGLARTVPEGYPPGSDVAN CEEEEEECCCCCCCHHHHHCCCCCCHHCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCCE LSVFGYDPRACYTGRSPLEAASMGVELGSADVAFRVNLVNLAPTRGTLVMNDYSAGHIST EEEEECCCCCEECCCCCHHHHHCCCCCCCCCEEEEEEEEEECCCCCEEEEECCCCCCCCC AEGRELIEAIQGVMGTDEFQFYPGVGYRHLMVWRNGKCGMTVVPPHDISGQSILEHLPKG HHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEEECCCCCEEEECCCCCCHHHHHHHCCCC EGAERLIELMNSSQLVLNNHPQYRRRLEEGKVPANSIWLWGHGKAPRMASFHEKFGLTGA CCHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHCCHHH VISAVDLVRGIGVCAGLDVIKVEGATGYIDTNYEGKVTAALEALEAHDYVYLHVEAPDEA HHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCCCHHHHHHHHHCCCEEEEEEECCCCC GHGGNLEHKLKAIEDFDARVVGPIMAGMEKFGSYRILCTPDHPTPLRLKTHTDAPVPFVL CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEECCCCCCEEEE FSGETSENAGVAGYDEESARSAGLVVEDGFRLMEMMLDR EECCCCCCCCCCCCCCHHHHHCCEEEECCHHHHHHHHCC >Mature Secondary Structure MKYIVLLGDGMSDEPMQELGGKTPLQAARTPHMDAMARRGRIGLARTVPEGYPPGSDVAN CEEEEEECCCCCCCHHHHHCCCCCCHHCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCCE LSVFGYDPRACYTGRSPLEAASMGVELGSADVAFRVNLVNLAPTRGTLVMNDYSAGHIST EEEEECCCCCEECCCCCHHHHHCCCCCCCCCEEEEEEEEEECCCCCEEEEECCCCCCCCC AEGRELIEAIQGVMGTDEFQFYPGVGYRHLMVWRNGKCGMTVVPPHDISGQSILEHLPKG HHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEEECCCCCEEEECCCCCCHHHHHHHCCCC EGAERLIELMNSSQLVLNNHPQYRRRLEEGKVPANSIWLWGHGKAPRMASFHEKFGLTGA CCHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHCCHHH VISAVDLVRGIGVCAGLDVIKVEGATGYIDTNYEGKVTAALEALEAHDYVYLHVEAPDEA HHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCCCHHHHHHHHHCCCEEEEEEECCCCC GHGGNLEHKLKAIEDFDARVVGPIMAGMEKFGSYRILCTPDHPTPLRLKTHTDAPVPFVL CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEECCCCCCEEEE FSGETSENAGVAGYDEESARSAGLVVEDGFRLMEMMLDR EECCCCCCCCCCCCCCHHHHHCCEEEECCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA