Click here to switch to the map view.

The map label for this gene is yfbG [C]

Identifier: 39996914

GI number: 39996914

Start: 1980542

End: 1981477

Strand: Reverse

Name: yfbG [C]

Synonym: GSU1815

Alternate gene names: 39996914

Gene position: 1981477-1980542 (Counterclockwise)

Preceding gene: 39996915

Following gene: 39996913

Centisome position: 51.95

GC content: 58.76

Gene sequence:

>936_bases
ATGCGCATCCTGGTAACCGGCGGCGCCGGATTCATCGGTTCTCATCTGTGCGAACGGCTTCTGGAGCAGGGGCATGACGT
GCTCTGCCTCGACAACTTTTTCACCGGGTCGAAACGCAATATCGATCGGCTGATGGATTTTCATCGTTTCGAGGTCATCC
GTCACGATATCATCGAGCCGATCCTGCTGGAAGTGGACCGGATCTACAATCTGGCGTGCCCTGCTTCGCCCGTTCACTAC
CAGTACAATCCGGTAAAGACCATCAAGACCAGCGTGATGGGAACCATCAACATGCTGGGGCTTGCCAAGCGCGTCAGGGC
GCGCATCCTCCAGGCATCCACTTCGGAGGTCTATGGCGATCCCACAATTCATCCCCAGCCCGAATCCTACTGGGGAAACG
TGAACCCGATCGGCATCCGGAGCTGCTACGACGAGGGAAAACGGGTGGCGGAAACCCTCTTGATGGACTACCATCGCCAG
AATGGTGTCGACATCCGGATCGCCCGCATCTTCAACACCTATGGCCCGCGGATGGCAGAACACGATGGGCGAGTGGTTTC
CAATTTCGTGGTGCAGGCCCTCCGGGGAGAAGATCTCACCGTGTACGGCGACGGCAGCCAGACCCGTTCCTTCTGCTATG
TGGACGACCTGCTGGACGGGCTCGTGACGCTCATGGAGCATGATCAGTTCTGCGGGCCCGTAAATCTTGGAAACCCGGAA
GAGACACCCATTATCGAGTTTGCCCGGCGGATCATTGCGATGACCGGTTCGTCCTCGCAGATCATCTATCGGCCGCTCCC
TTCCGACGATCCTCGCCAGCGTCAGCCCGACATCACCCTGGCCCGAACGATCCTTGGCTGGGAGCCTCGCGTATCCCTCG
ACGAGGGGCTTGCAAAAACCATTGAGTACTTTGCCGGCCTGACCCCGACCGGATAG

Upstream 100 bases:

>100_bases
GGGCGCAATCTTTACAATCCGCGCCGCCTGAAAGAAATGGGCTTCATTTACCACGGAATCGGCCGCAACGGCTCCGGCTT
CGTGGAAAAGTAGGCGACTT

Downstream 100 bases:

>100_bases
CAGTACGGAGGAAATCATGCGGAAGCGGATGTATCTCATCCCGACCGGGTGCATACTCTTTATCTTGTATTTCACCGTGT
TCGGTGAACGGGGATTGTTG

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MRILVTGGAGFIGSHLCERLLEQGHDVLCLDNFFTGSKRNIDRLMDFHRFEVIRHDIIEPILLEVDRIYNLACPASPVHY
QYNPVKTIKTSVMGTINMLGLAKRVRARILQASTSEVYGDPTIHPQPESYWGNVNPIGIRSCYDEGKRVAETLLMDYHRQ
NGVDIRIARIFNTYGPRMAEHDGRVVSNFVVQALRGEDLTVYGDGSQTRSFCYVDDLLDGLVTLMEHDQFCGPVNLGNPE
ETPIIEFARRIIAMTGSSSQIIYRPLPSDDPRQRQPDITLARTILGWEPRVSLDEGLAKTIEYFAGLTPTG

Sequences:

>Translated_311_residues
MRILVTGGAGFIGSHLCERLLEQGHDVLCLDNFFTGSKRNIDRLMDFHRFEVIRHDIIEPILLEVDRIYNLACPASPVHY
QYNPVKTIKTSVMGTINMLGLAKRVRARILQASTSEVYGDPTIHPQPESYWGNVNPIGIRSCYDEGKRVAETLLMDYHRQ
NGVDIRIARIFNTYGPRMAEHDGRVVSNFVVQALRGEDLTVYGDGSQTRSFCYVDDLLDGLVTLMEHDQFCGPVNLGNPE
ETPIIEFARRIIAMTGSSSQIIYRPLPSDDPRQRQPDITLARTILGWEPRVSLDEGLAKTIEYFAGLTPTG
>Mature_311_residues
MRILVTGGAGFIGSHLCERLLEQGHDVLCLDNFFTGSKRNIDRLMDFHRFEVIRHDIIEPILLEVDRIYNLACPASPVHY
QYNPVKTIKTSVMGTINMLGLAKRVRARILQASTSEVYGDPTIHPQPESYWGNVNPIGIRSCYDEGKRVAETLLMDYHRQ
NGVDIRIARIFNTYGPRMAEHDGRVVSNFVVQALRGEDLTVYGDGSQTRSFCYVDDLLDGLVTLMEHDQFCGPVNLGNPE
ETPIIEFARRIIAMTGSSSQIIYRPLPSDDPRQRQPDITLARTILGWEPRVSLDEGLAKTIEYFAGLTPTG

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Homo sapiens, GI42516563, Length=303, Percent_Identity=62.046204620462, Blast_Score=407, Evalue=1e-114,
Organism=Homo sapiens, GI7657641, Length=322, Percent_Identity=27.0186335403727, Blast_Score=112, Evalue=4e-25,
Organism=Escherichia coli, GI1788589, Length=340, Percent_Identity=27.0588235294118, Blast_Score=104, Evalue=6e-24,
Organism=Escherichia coli, GI1788353, Length=339, Percent_Identity=25.0737463126844, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI48994969, Length=337, Percent_Identity=25.8160237388724, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1786974, Length=342, Percent_Identity=28.0701754385965, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1788365, Length=327, Percent_Identity=25.3822629969419, Blast_Score=66, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17539532, Length=304, Percent_Identity=58.5526315789474, Blast_Score=386, Evalue=1e-108,
Organism=Caenorhabditis elegans, GI115532424, Length=339, Percent_Identity=27.1386430678466, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17568069, Length=330, Percent_Identity=24.5454545454545, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71982035, Length=336, Percent_Identity=26.4880952380952, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71982038, Length=338, Percent_Identity=26.3313609467456, Blast_Score=82, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6319493, Length=292, Percent_Identity=24.3150684931507, Blast_Score=77, Evalue=4e-15,
Organism=Drosophila melanogaster, GI21356223, Length=303, Percent_Identity=62.3762376237624, Blast_Score=406, Evalue=1e-114,
Organism=Drosophila melanogaster, GI19923002, Length=337, Percent_Identity=24.0356083086053, Blast_Score=74, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 35024; Mature: 35024

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILVTGGAGFIGSHLCERLLEQGHDVLCLDNFFTGSKRNIDRLMDFHRFEVIRHDIIEP
CEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ILLEVDRIYNLACPASPVHYQYNPVKTIKTSVMGTINMLGLAKRVRARILQASTSEVYGD
HHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PTIHPQPESYWGNVNPIGIRSCYDEGKRVAETLLMDYHRQNGVDIRIARIFNTYGPRMAE
CCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCHHH
HDGRVVSNFVVQALRGEDLTVYGDGSQTRSFCYVDDLLDGLVTLMEHDQFCGPVNLGNPE
CCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCC
ETPIIEFARRIIAMTGSSSQIIYRPLPSDDPRQRQPDITLARTILGWEPRVSLDEGLAKT
CCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHH
IEYFAGLTPTG
HHHHHCCCCCC
>Mature Secondary Structure
MRILVTGGAGFIGSHLCERLLEQGHDVLCLDNFFTGSKRNIDRLMDFHRFEVIRHDIIEP
CEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ILLEVDRIYNLACPASPVHYQYNPVKTIKTSVMGTINMLGLAKRVRARILQASTSEVYGD
HHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PTIHPQPESYWGNVNPIGIRSCYDEGKRVAETLLMDYHRQNGVDIRIARIFNTYGPRMAE
CCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCHHH
HDGRVVSNFVVQALRGEDLTVYGDGSQTRSFCYVDDLLDGLVTLMEHDQFCGPVNLGNPE
CCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCC
ETPIIEFARRIIAMTGSSSQIIYRPLPSDDPRQRQPDITLARTILGWEPRVSLDEGLAKT
CCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHH
IEYFAGLTPTG
HHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]