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The map label for this gene is pyrK [H]

Identifier: 39996855

GI number: 39996855

Start: 1918983

End: 1919798

Strand: Reverse

Name: pyrK [H]

Synonym: GSU1756

Alternate gene names: 39996855

Gene position: 1919798-1918983 (Counterclockwise)

Preceding gene: 39996856

Following gene: 39996854

Centisome position: 50.33

GC content: 62.13

Gene sequence:

>816_bases
ATGCAGTTTAAGGCGATGATCATCTCGAACCACGAGGTTTCTCCCGGCTACTTCCGCATGAGAATGTCTGCGCCTCCCGA
ACTGGCCGATGCCAGACCGGGACAGTTCATCATGGTGCGGGTCCGGGACGCTATCGATCCCCTGCTGCGTCGTCCCTTCG
GCATCTTCGACGTGGGTACCGTGGCTTCCGAGTTCTCCGGATGCGGCCCGCAGACCTACGTGGAAATGCTGTACAAGGTG
GTGGGGAAGGGGACCGAAACACTTTCGACCTACCACCATGGCGACCACGTGGACCTTCTGGCTCCTCTCGGCACCGGCTT
CGACCTGGGCGATCCGGACGAAGAGAAGATTCTCGTGGGCGGGGGCATCGGCATCGCCCCGCTCTACTATCTGGCCAAAA
AACTGGTGGAGCGCTCACGGGTCCGCTTCTTCCTGGGGGGCAGGACCAGGGACGACATCCTTTGCGTGACCGAATTCGAG
CGGCTTGGTGTGGAAACCTACGTTGCGACCGACGACGGCACCCTCGGCGATCGGGGCTTCGTGACGGACGTCATGGAGCG
CCACATCCGGGGCGCGGCGGGCAAGAGAACCATCTATGCCTGCGGCCCCATGCCCATGCTTCAGGCCGTGGCCGGCATCG
CCGAGCGAACCGGCGTCCCCTGTCAGGTTTCTCTTGAGGCCTATATGGCGTGCGGCATGGGGGCGTGCCTTGGTTGCGTG
GTGAAGGGGAAGGAGCATTCAGACGAGTCGCCGGACTACCGTTGCGTGTGCAAGGATGGGCCGGTTTTCGCCTTTGATCA
GTTGAAATGGGTGTAG

Upstream 100 bases:

>100_bases
CTCGGATTTGCCGAGACCGGCCGGCGTCCTCGATACTACGAAAACGGCGAGGATGCCGTGCTGATGACTTACTCAACTGA
TGAAGGAGAGGGCTCCCCCC

Downstream 100 bases:

>100_bases
CGCCCCGGAGCGAGGAGCACTAATGCAGAAACCTGACCTTTCCGTTGAGATTGCTGGCATCACGCTGAGAAACCCGGTCA
TGACCGCCTCGGGCACCTTC

Product: dihydroorotate dehydrogenase, electron transfer subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MQFKAMIISNHEVSPGYFRMRMSAPPELADARPGQFIMVRVRDAIDPLLRRPFGIFDVGTVASEFSGCGPQTYVEMLYKV
VGKGTETLSTYHHGDHVDLLAPLGTGFDLGDPDEEKILVGGGIGIAPLYYLAKKLVERSRVRFFLGGRTRDDILCVTEFE
RLGVETYVATDDGTLGDRGFVTDVMERHIRGAAGKRTIYACGPMPMLQAVAGIAERTGVPCQVSLEAYMACGMGACLGCV
VKGKEHSDESPDYRCVCKDGPVFAFDQLKWV

Sequences:

>Translated_271_residues
MQFKAMIISNHEVSPGYFRMRMSAPPELADARPGQFIMVRVRDAIDPLLRRPFGIFDVGTVASEFSGCGPQTYVEMLYKV
VGKGTETLSTYHHGDHVDLLAPLGTGFDLGDPDEEKILVGGGIGIAPLYYLAKKLVERSRVRFFLGGRTRDDILCVTEFE
RLGVETYVATDDGTLGDRGFVTDVMERHIRGAAGKRTIYACGPMPMLQAVAGIAERTGVPCQVSLEAYMACGMGACLGCV
VKGKEHSDESPDYRCVCKDGPVFAFDQLKWV
>Mature_271_residues
MQFKAMIISNHEVSPGYFRMRMSAPPELADARPGQFIMVRVRDAIDPLLRRPFGIFDVGTVASEFSGCGPQTYVEMLYKV
VGKGTETLSTYHHGDHVDLLAPLGTGFDLGDPDEEKILVGGGIGIAPLYYLAKKLVERSRVRFFLGGRTRDDILCVTEFE
RLGVETYVATDDGTLGDRGFVTDVMERHIRGAAGKRTIYACGPMPMLQAVAGIAERTGVPCQVSLEAYMACGMGACLGCV
VKGKEHSDESPDYRCVCKDGPVFAFDQLKWV

Specific function: Is responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the pyrD subunit to the ultimate electron acceptor NAD(+) [H]

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012165
- InterPro:   IPR019480
- InterPro:   IPR017927
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR000951
- InterPro:   IPR017938 [H]

Pfam domain/function: PF10418 DHODB_Fe-S_bind; PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]

EC number: NA

Molecular weight: Translated: 29660; Mature: 29660

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFKAMIISNHEVSPGYFRMRMSAPPELADARPGQFIMVRVRDAIDPLLRRPFGIFDVGT
CCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCEEHHH
VASEFSGCGPQTYVEMLYKVVGKGTETLSTYHHGDHVDLLAPLGTGFDLGDPDEEKILVG
HHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEE
GGIGIAPLYYLAKKLVERSRVRFFLGGRTRDDILCVTEFERLGVETYVATDDGTLGDRGF
CCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEEEEHHHCCCEEEEECCCCCCCCCCH
VTDVMERHIRGAAGKRTIYACGPMPMLQAVAGIAERTGVPCQVSLEAYMACGMGACLGCV
HHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEHHHHHHHCHHHHHHHE
VKGKEHSDESPDYRCVCKDGPVFAFDQLKWV
EECCCCCCCCCCEEEEECCCCEEECCCEECC
>Mature Secondary Structure
MQFKAMIISNHEVSPGYFRMRMSAPPELADARPGQFIMVRVRDAIDPLLRRPFGIFDVGT
CCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCEEHHH
VASEFSGCGPQTYVEMLYKVVGKGTETLSTYHHGDHVDLLAPLGTGFDLGDPDEEKILVG
HHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEE
GGIGIAPLYYLAKKLVERSRVRFFLGGRTRDDILCVTEFERLGVETYVATDDGTLGDRGF
CCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEEEEHHHCCCEEEEECCCCCCCCCCH
VTDVMERHIRGAAGKRTIYACGPMPMLQAVAGIAERTGVPCQVSLEAYMACGMGACLGCV
HHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEHHHHHHHCHHHHHHHE
VKGKEHSDESPDYRCVCKDGPVFAFDQLKWV
EECCCCCCCCCCEEEEECCCCEEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA