| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is iorA [H]
Identifier: 39996838
GI number: 39996838
Start: 1903693
End: 1905450
Strand: Reverse
Name: iorA [H]
Synonym: GSU1739
Alternate gene names: 39996838
Gene position: 1905450-1903693 (Counterclockwise)
Preceding gene: 39996840
Following gene: 39996837
Centisome position: 49.96
GC content: 60.92
Gene sequence:
>1758_bases ATGAAGGAAATTCTATCAGGCAACGAAGCCATCGCCCGAGGAGCCTTCGAGGCGGGGGTAAAGGTTGCCAGTGCCTATCC CGGTACCCCCTCCACCGAAATCCTCGAGAACATTGTCAACTACAAGGAGATAGACGCTTCATGGGCACCCAACGAAAAGG TTGCCCTTGAGGTCGCGATCGGCGCCTCGTTCGGCGGCGGCCGTTCCATCGCCTGCATGAAGCACGTGGGAGTCAACGTC GCGGCCGACCCGCTCTTCACCCTGTCGTACACCGGGGTGGGTGGCGGATTGGTGCTGGTCGTGGCGGATGACCCCGAGAT GCATTCGTCCCAGGACGAGCAGGACAGCCGCAACTATGCACGGTTCGCCAAGGTCCCGATGCTGGAGCCGGCTGATTCCC AGGAGTGCAAGGATTTCACCAGGCTTGCATTCGAAATTTCGGAGCAGTTCGATACCCCGGTTATGCTCCGCAGTTGCACC CGGATATCCCACGGCAAATCGATCGTGGAGCTGGGTGAACCGGCAACCGGACTCCCCACGCCGAAGCTCGTCAAGAATCC CGCCAAGCTCGTCATGCTCCCTGGCAATGCCCGGGTGCGGCACCCCTTCGTGGAAGAGCGGCTCCTGAAACTTGCGGACT ATGGTCGTACCGCTGCCGTCAACCGGGTGGAGATGCGCGACACGGAACTCGGTATCGTCACCGCGGGGGTGTCTTACCAG TATGTCCGCGAGGTGTTCCCCAACGCCTCGGTGCTCAAGCTCGGCATGGTGTATCCTCTCCCGATGGATCTCATCAGGGA GTTTGCCTCGAAGGTCACGAAGCTTATCGTGGTGGAGGAGCTGGACGCGTTTATCGAGGATCAGGTGAAGGCTGCCGGCA TTAGCGTCACCGGCAAGGAGGCAATTCCGCTGTGCGGAGAACTGACACCGGGCCGGCTGCGTGCCGCCTTCGGCATCCCC GGGGCACCTCAGGTGACGGTGGAGAATCTTCCGGGTCGTCCGCCGAACATGTGCCCCGGCTGCCCCCATCGCGGCGTCTT TTTCACGCTCAACCAGCTGAAGGCTTATGTGACCGGTGACATCGGCTGCTACACCCTCGGTTTCATGCCCCCCCTCAACG CTATGGATACCTGTGTCTGCATGGGGGCGAGCATCAGCAGCGCTAGTGGCATCGTGCGCGTCCTTTCGGACGAAGAGAAG AAAAAGGTTGTGGCAGTGATCGGCGACTCGACCTTCCTCCACACGGGCGTCAACAGCCTCATGGAGATGGCCTACAACAA AGCCCCTGCAACGGTGGTGATTCTCGACAACAGGATCACGGCCATGACGGGGCGCCAGGACAATCCGGCGTCCGGCTGGA CCCTTATGGATGATTCCACCAACGCGGTGGATCTGGTCCAGCTTTGCACTGCCCTCGGCATTCGACACGTGCGGGTGGTG GACCCCCTGGACCTCGACCAGACCCGCGCGGCTCTTCAGGAAGAGATGAACCGTCCCGAGCCGTCGGTAATCATCACCAA CCGTCCCTGCGTGCTGGTGAAACGGGAGGGGGTCTTCCAGAAGGGGCTTGTGCTCTCCGTCGACCAGGATCACTGCACCG GCTGCAAGGCGTGCCTGAAGATCGGTTGTCCGGCAATCGAGTGGATCCCTGCTCCGGATGGCAAAAAGGGAAAAGCAAAG ATCGACCCACTGCTCTGCAATGGCTGCGATGTCTGCCGCCAGCTCTGTAAGTTCAATGCCATCGGGAGGGCCCAATGA
Upstream 100 bases:
>100_bases TTCTACAAAGCAGTTGACTTACAATCCCCTTATTTGTATAGTCTTTGCACCTTTTTAGGGGGGCATGCCCCTTATTTTAT TTTTCAGGAACCAGACAACC
Downstream 100 bases:
>100_bases GCGACACCATCACCAACATCCTCCTGGTGGGCGTGGGCGGGCAGGGAATACTGCTCGCGTCTGAAATCCTCTCCGAGGCA TTCATGCTGGCCGGGTTCGA
Product: indolepyruvate ferredoxin oxidoreductase subunit alpha
Products: NA
Alternate protein names: IOR; Indolepyruvate ferredoxin oxidoreductase subunit alpha [H]
Number of amino acids: Translated: 585; Mature: 585
Protein sequence:
>585_residues MKEILSGNEAIARGAFEAGVKVASAYPGTPSTEILENIVNYKEIDASWAPNEKVALEVAIGASFGGGRSIACMKHVGVNV AADPLFTLSYTGVGGGLVLVVADDPEMHSSQDEQDSRNYARFAKVPMLEPADSQECKDFTRLAFEISEQFDTPVMLRSCT RISHGKSIVELGEPATGLPTPKLVKNPAKLVMLPGNARVRHPFVEERLLKLADYGRTAAVNRVEMRDTELGIVTAGVSYQ YVREVFPNASVLKLGMVYPLPMDLIREFASKVTKLIVVEELDAFIEDQVKAAGISVTGKEAIPLCGELTPGRLRAAFGIP GAPQVTVENLPGRPPNMCPGCPHRGVFFTLNQLKAYVTGDIGCYTLGFMPPLNAMDTCVCMGASISSASGIVRVLSDEEK KKVVAVIGDSTFLHTGVNSLMEMAYNKAPATVVILDNRITAMTGRQDNPASGWTLMDDSTNAVDLVQLCTALGIRHVRVV DPLDLDQTRAALQEEMNRPEPSVIITNRPCVLVKREGVFQKGLVLSVDQDHCTGCKACLKIGCPAIEWIPAPDGKKGKAK IDPLLCNGCDVCRQLCKFNAIGRAQ
Sequences:
>Translated_585_residues MKEILSGNEAIARGAFEAGVKVASAYPGTPSTEILENIVNYKEIDASWAPNEKVALEVAIGASFGGGRSIACMKHVGVNV AADPLFTLSYTGVGGGLVLVVADDPEMHSSQDEQDSRNYARFAKVPMLEPADSQECKDFTRLAFEISEQFDTPVMLRSCT RISHGKSIVELGEPATGLPTPKLVKNPAKLVMLPGNARVRHPFVEERLLKLADYGRTAAVNRVEMRDTELGIVTAGVSYQ YVREVFPNASVLKLGMVYPLPMDLIREFASKVTKLIVVEELDAFIEDQVKAAGISVTGKEAIPLCGELTPGRLRAAFGIP GAPQVTVENLPGRPPNMCPGCPHRGVFFTLNQLKAYVTGDIGCYTLGFMPPLNAMDTCVCMGASISSASGIVRVLSDEEK KKVVAVIGDSTFLHTGVNSLMEMAYNKAPATVVILDNRITAMTGRQDNPASGWTLMDDSTNAVDLVQLCTALGIRHVRVV DPLDLDQTRAALQEEMNRPEPSVIITNRPCVLVKREGVFQKGLVLSVDQDHCTGCKACLKIGCPAIEWIPAPDGKKGKAK IDPLLCNGCDVCRQLCKFNAIGRAQ >Mature_585_residues MKEILSGNEAIARGAFEAGVKVASAYPGTPSTEILENIVNYKEIDASWAPNEKVALEVAIGASFGGGRSIACMKHVGVNV AADPLFTLSYTGVGGGLVLVVADDPEMHSSQDEQDSRNYARFAKVPMLEPADSQECKDFTRLAFEISEQFDTPVMLRSCT RISHGKSIVELGEPATGLPTPKLVKNPAKLVMLPGNARVRHPFVEERLLKLADYGRTAAVNRVEMRDTELGIVTAGVSYQ YVREVFPNASVLKLGMVYPLPMDLIREFASKVTKLIVVEELDAFIEDQVKAAGISVTGKEAIPLCGELTPGRLRAAFGIP GAPQVTVENLPGRPPNMCPGCPHRGVFFTLNQLKAYVTGDIGCYTLGFMPPLNAMDTCVCMGASISSASGIVRVLSDEEK KKVVAVIGDSTFLHTGVNSLMEMAYNKAPATVVILDNRITAMTGRQDNPASGWTLMDDSTNAVDLVQLCTALGIRHVRVV DPLDLDQTRAALQEEMNRPEPSVIITNRPCVLVKREGVFQKGLVLSVDQDHCTGCKACLKIGCPAIEWIPAPDGKKGKAK IDPLLCNGCDVCRQLCKFNAIGRAQ
Specific function: Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates [H]
COG id: COG4231
COG function: function code C; Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR017721 - InterPro: IPR002880 - InterPro: IPR011766 - InterPro: IPR009014 - InterPro: IPR015941 [H]
Pfam domain/function: PF01855 POR_N; PF02775 TPP_enzyme_C [H]
EC number: =1.2.7.8 [H]
Molecular weight: Translated: 63004; Mature: 63004
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEILSGNEAIARGAFEAGVKVASAYPGTPSTEILENIVNYKEIDASWAPNEKVALEVAI CCCHHCCCHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHCHHHCCCCCCCCCCEEEEEEE GASFGGGRSIACMKHVGVNVAADPLFTLSYTGVGGGLVLVVADDPEMHSSQDEQDSRNYA ECCCCCCCEEEEHHHCCCCEECCCEEEEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHH RFAKVPMLEPADSQECKDFTRLAFEISEQFDTPVMLRSCTRISHGKSIVELGEPATGLPT HHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEECCCCCCCCCC PKLVKNPAKLVMLPGNARVRHPFVEERLLKLADYGRTAAVNRVEMRDTELGIVTAGVSYQ HHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHCEEEEECCCCEEEEEECCCHH YVREVFPNASVLKLGMVYPLPMDLIREFASKVTKLIVVEELDAFIEDQVKAAGISVTGKE HHHHHCCCCCEEEECEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCC AIPLCGELTPGRLRAAFGIPGAPQVTVENLPGRPPNMCPGCPHRGVFFTLNQLKAYVTGD CCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEHEEEEEECC IGCYTLGFMPPLNAMDTCVCMGASISSASGIVRVLSDEEKKKVVAVIGDSTFLHTGVNSL CCEEEEECCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEECCCHHHHHHHHHH MEMAYNKAPATVVILDNRITAMTGRQDNPASGWTLMDDSTNAVDLVQLCTALGIRHVRVV HHHHHCCCCEEEEEECCCEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCEEEEE DPLDLDQTRAALQEEMNRPEPSVIITNRPCVLVKREGVFQKGLVLSVDQDHCTGCKACLK CCCCCHHHHHHHHHHHCCCCCCEEEECCCEEEEECCCCCCCCEEEEECCCCCHHHHHHHH IGCPAIEWIPAPDGKKGKAKIDPLLCNGCDVCRQLCKFNAIGRAQ HCCCCEEEEECCCCCCCCCCCCCEEECCHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKEILSGNEAIARGAFEAGVKVASAYPGTPSTEILENIVNYKEIDASWAPNEKVALEVAI CCCHHCCCHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHCHHHCCCCCCCCCCEEEEEEE GASFGGGRSIACMKHVGVNVAADPLFTLSYTGVGGGLVLVVADDPEMHSSQDEQDSRNYA ECCCCCCCEEEEHHHCCCCEECCCEEEEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHH RFAKVPMLEPADSQECKDFTRLAFEISEQFDTPVMLRSCTRISHGKSIVELGEPATGLPT HHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEECCCCCCCCCC PKLVKNPAKLVMLPGNARVRHPFVEERLLKLADYGRTAAVNRVEMRDTELGIVTAGVSYQ HHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHCEEEEECCCCEEEEEECCCHH YVREVFPNASVLKLGMVYPLPMDLIREFASKVTKLIVVEELDAFIEDQVKAAGISVTGKE HHHHHCCCCCEEEECEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCC AIPLCGELTPGRLRAAFGIPGAPQVTVENLPGRPPNMCPGCPHRGVFFTLNQLKAYVTGD CCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEHEEEEEECC IGCYTLGFMPPLNAMDTCVCMGASISSASGIVRVLSDEEKKKVVAVIGDSTFLHTGVNSL CCEEEEECCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEECCCHHHHHHHHHH MEMAYNKAPATVVILDNRITAMTGRQDNPASGWTLMDDSTNAVDLVQLCTALGIRHVRVV HHHHHCCCCEEEEEECCCEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCEEEEE DPLDLDQTRAALQEEMNRPEPSVIITNRPCVLVKREGVFQKGLVLSVDQDHCTGCKACLK CCCCCHHHHHHHHHHHCCCCCCEEEECCCEEEEECCCCCCCCEEEEECCCCCHHHHHHHH IGCPAIEWIPAPDGKKGKAKIDPLLCNGCDVCRQLCKFNAIGRAQ HCCCCEEEEECCCCCCCCCCCCCEEECCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]