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The map label for this gene is 39996798

Identifier: 39996798

GI number: 39996798

Start: 1858610

End: 1860490

Strand: Direct

Name: 39996798

Synonym: GSU1698

Alternate gene names: NA

Gene position: 1858610-1860490 (Clockwise)

Preceding gene: 39996797

Following gene: 39996801

Centisome position: 48.73

GC content: 57.74

Gene sequence:

>1881_bases
TTGACCTTCACAGACAACGGATGGACGGTGAGCTCCAAAAAAGATAAACATCTCGACAGTGCCCAGAAGTTCCTTATCAA
GGGACAGGTCGACCGGGCGATCCGTGAATACGAGCAAGCAGTAACACTCGACCCCAAGGATGTGCGGGTCCGGCAGAAGT
ACGCCGAGTTGTTGGTACGCGCCAGCAGAAAGAACGAGGCGTTGCGGGAGTTCGAAGTCATCGGTAAGTTCTACGCTGAC
AACGGCTTTTTCCTCAAGGCAATCGCGGTCTACAAGCAGATCCAGAAAATCGACCCCTCCAATTCGGGCACATCTCTCAC
CCTTGCCACCCTCAATGAAAAGCAGGGACTTGTCGGCAATGCCCTGGCTGAATACAAGGCTGTCTACGACTTCTACGAAA
AGAGCGGGCAGCTCCGTGAAGGGGTAAAGGTCCTGGAGCGCATGCACTCCCTGGACCGGGAGAACATCACTATTCGCCTG
AAACTGGCCGACACTCGGAACAAGATCGGCCAGACAGATGAAGCGTATCAAGAGTTCACCGTCCTGGCCCGCGAAATCAG
AGCGAAGGGCGATGCTGCTGCCTACGGACGCATCTGCGAACGGATCGGGCAACTCTTCCCGGAGCGGAGGGAGTTTCTCC
TCGTCGTTGCCGAAGATGAACTGGCCGCCGGTAACCATGCCGCCGCTCTCCCCCTGTTGAAGCAGTTCGCGAACGACGAG
CGCTTCAATCCGCGCGCACTCTATCTTCTGGCCGACGCTTCCCGGGCAGCGGGCGACCTGAAAACCGCTTCGGATGCATA
CAACCGCATCGTGCTCAACTACCCCGGAGAGCTTACCGCCTGCAAAGGGCTCTTGTTCTGTCTGCGTCATAGGGGTGATG
TGGAGGAGGCGCTTGAACTCCTGAAGCGCTTTGAGCCCGAATTCCTCAGCCACGAGCCCGAGACCCTTGAACAGTTCTAC
CTGTCGCTCCAGGAGATCGCTCCCCATAATGAGGCTATTGCCGAAGGGGTGCGCAGGGTTCGCGGGACAGCCGACAAGGA
TGTTGAAGTCTCCGGTGAACAGGAGCAGGAACTCGCATCGTTTTCTGAAGATTCGGCTCCCTTGCCGGATGGCTCGCCCG
CTGTCCCTGAATCTCCCGCTGCCGGGGTGGCAGAAGTTGACTTCGATTCCGATGAGTCCCTCTGGGAAGAAGAGGTTGAG
ATCGGGCTTGAAGGCGACGGCGATGCCGACCTTGAAGAAATCGAGCTCGAAGTTTCCGTGCTGGATGAATCGACCGATTG
GCTTGCCGGCCCCGAAAGCGAGGCTCCGTCATTAACGGACGACTTGTCCCTTGATTTCACTGAGGATGAGCTGAACGATC
TTGTGCCGCCCCCCCCATCCGTTCCGCCGTCCCCCGGCTTGAAGGGTGATAAGTATGGGCTTGACGGCCTTTTCTCAGCG
TTCAAAAAAGGGGTGGGGGAACAACTCGACCAGGGCGACACGGAGACTCATTACAACCTCGGCATCGCTTACAAGGAAAT
GGGACTGTACGATGATGCCGTCGCCGAGTTCAAGGCAGCGGCGCAGGACCCCCGTCGCCTTGTGGATTGCATCACGCTTC
AGGGGATATGTTACCGGGACAAGGGAGAACCGGCCCGGGCGGAGGAGTTGTTCAATTCGGGGCTGATGCTGTCGGAGCTT
TCGCCGGAGGAGTTCCTCTGTCTGACCTATGAATTGGCACTTACCCTCGAGCAAAAGGGAGACGTGGAAAAGGCCCTGAC
CGAGTATCGCAAGATTGCCGACGTCGACCCAGCTTTCCGTGACACGGCCGGCAAGCTGGAGCATCTGGGCCACGACGGCC
TTGCCGATGCGGATCTTGTTGATCTTGAGGAAACGCCGTAA

Upstream 100 bases:

>100_bases
ATCGTCGTAGCAGCCCATAGTGCGCGAAGCTACGCTATTTCGCAGGGTGTCCGCGCTTGACAAGGTACACTCTTTCCATT
AGGTTACAAGTACATGTATT

Downstream 100 bases:

>100_bases
CGCCTTTTACGAAAAGAGCAGTCCCCGGGGCGCCACAAGTCGGACCGGGGCCAAAAACAACTCGCTGGTATAGCTGTCAG
GCAGGGGGGGCAAGGGGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide Domain Protein; TPR Domain Protein; Tetratricopeptide TPR_2 Repeat Protein

Number of amino acids: Translated: 626; Mature: 625

Protein sequence:

>626_residues
MTFTDNGWTVSSKKDKHLDSAQKFLIKGQVDRAIREYEQAVTLDPKDVRVRQKYAELLVRASRKNEALREFEVIGKFYAD
NGFFLKAIAVYKQIQKIDPSNSGTSLTLATLNEKQGLVGNALAEYKAVYDFYEKSGQLREGVKVLERMHSLDRENITIRL
KLADTRNKIGQTDEAYQEFTVLAREIRAKGDAAAYGRICERIGQLFPERREFLLVVAEDELAAGNHAAALPLLKQFANDE
RFNPRALYLLADASRAAGDLKTASDAYNRIVLNYPGELTACKGLLFCLRHRGDVEEALELLKRFEPEFLSHEPETLEQFY
LSLQEIAPHNEAIAEGVRRVRGTADKDVEVSGEQEQELASFSEDSAPLPDGSPAVPESPAAGVAEVDFDSDESLWEEEVE
IGLEGDGDADLEEIELEVSVLDESTDWLAGPESEAPSLTDDLSLDFTEDELNDLVPPPPSVPPSPGLKGDKYGLDGLFSA
FKKGVGEQLDQGDTETHYNLGIAYKEMGLYDDAVAEFKAAAQDPRRLVDCITLQGICYRDKGEPARAEELFNSGLMLSEL
SPEEFLCLTYELALTLEQKGDVEKALTEYRKIADVDPAFRDTAGKLEHLGHDGLADADLVDLEETP

Sequences:

>Translated_626_residues
MTFTDNGWTVSSKKDKHLDSAQKFLIKGQVDRAIREYEQAVTLDPKDVRVRQKYAELLVRASRKNEALREFEVIGKFYAD
NGFFLKAIAVYKQIQKIDPSNSGTSLTLATLNEKQGLVGNALAEYKAVYDFYEKSGQLREGVKVLERMHSLDRENITIRL
KLADTRNKIGQTDEAYQEFTVLAREIRAKGDAAAYGRICERIGQLFPERREFLLVVAEDELAAGNHAAALPLLKQFANDE
RFNPRALYLLADASRAAGDLKTASDAYNRIVLNYPGELTACKGLLFCLRHRGDVEEALELLKRFEPEFLSHEPETLEQFY
LSLQEIAPHNEAIAEGVRRVRGTADKDVEVSGEQEQELASFSEDSAPLPDGSPAVPESPAAGVAEVDFDSDESLWEEEVE
IGLEGDGDADLEEIELEVSVLDESTDWLAGPESEAPSLTDDLSLDFTEDELNDLVPPPPSVPPSPGLKGDKYGLDGLFSA
FKKGVGEQLDQGDTETHYNLGIAYKEMGLYDDAVAEFKAAAQDPRRLVDCITLQGICYRDKGEPARAEELFNSGLMLSEL
SPEEFLCLTYELALTLEQKGDVEKALTEYRKIADVDPAFRDTAGKLEHLGHDGLADADLVDLEETP
>Mature_625_residues
TFTDNGWTVSSKKDKHLDSAQKFLIKGQVDRAIREYEQAVTLDPKDVRVRQKYAELLVRASRKNEALREFEVIGKFYADN
GFFLKAIAVYKQIQKIDPSNSGTSLTLATLNEKQGLVGNALAEYKAVYDFYEKSGQLREGVKVLERMHSLDRENITIRLK
LADTRNKIGQTDEAYQEFTVLAREIRAKGDAAAYGRICERIGQLFPERREFLLVVAEDELAAGNHAAALPLLKQFANDER
FNPRALYLLADASRAAGDLKTASDAYNRIVLNYPGELTACKGLLFCLRHRGDVEEALELLKRFEPEFLSHEPETLEQFYL
SLQEIAPHNEAIAEGVRRVRGTADKDVEVSGEQEQELASFSEDSAPLPDGSPAVPESPAAGVAEVDFDSDESLWEEEVEI
GLEGDGDADLEEIELEVSVLDESTDWLAGPESEAPSLTDDLSLDFTEDELNDLVPPPPSVPPSPGLKGDKYGLDGLFSAF
KKGVGEQLDQGDTETHYNLGIAYKEMGLYDDAVAEFKAAAQDPRRLVDCITLQGICYRDKGEPARAEELFNSGLMLSELS
PEEFLCLTYELALTLEQKGDVEKALTEYRKIADVDPAFRDTAGKLEHLGHDGLADADLVDLEETP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69488; Mature: 69357

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFTDNGWTVSSKKDKHLDSAQKFLIKGQVDRAIREYEQAVTLDPKDVRVRQKYAELLVR
CCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
ASRKNEALREFEVIGKFYADNGFFLKAIAVYKQIQKIDPSNSGTSLTLATLNEKQGLVGN
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHH
ALAEYKAVYDFYEKSGQLREGVKVLERMHSLDRENITIRLKLADTRNKIGQTDEAYQEFT
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHCCCCHHHHHHHH
VLAREIRAKGDAAAYGRICERIGQLFPERREFLLVVAEDELAAGNHAAALPLLKQFANDE
HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCC
RFNPRALYLLADASRAAGDLKTASDAYNRIVLNYPGELTACKGLLFCLRHRGDVEEALEL
CCCCEEEEEEECCCCCCCCCHHHHHHHCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHH
LKRFEPEFLSHEPETLEQFYLSLQEIAPHNEAIAEGVRRVRGTADKDVEVSGEQEQELAS
HHHCCHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
FSEDSAPLPDGSPAVPESPAAGVAEVDFDSDESLWEEEVEIGLEGDGDADLEEIELEVSV
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHEEEEEE
LDESTDWLAGPESEAPSLTDDLSLDFTEDELNDLVPPPPSVPPSPGLKGDKYGLDGLFSA
ECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHH
FKKGVGEQLDQGDTETHYNLGIAYKEMGLYDDAVAEFKAAAQDPRRLVDCITLQGICYRD
HHHHHHHHHCCCCCCCEEEEEEEHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHCCEEECC
KGEPARAEELFNSGLMLSELSPEEFLCLTYELALTLEQKGDVEKALTEYRKIADVDPAFR
CCCCHHHHHHHHCCCEEECCCCCHHEEEEEEEEEEECCCCCHHHHHHHHHHHHCCCHHHH
DTAGKLEHLGHDGLADADLVDLEETP
HHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TFTDNGWTVSSKKDKHLDSAQKFLIKGQVDRAIREYEQAVTLDPKDVRVRQKYAELLVR
CCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
ASRKNEALREFEVIGKFYADNGFFLKAIAVYKQIQKIDPSNSGTSLTLATLNEKQGLVGN
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHH
ALAEYKAVYDFYEKSGQLREGVKVLERMHSLDRENITIRLKLADTRNKIGQTDEAYQEFT
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHCCCCHHHHHHHH
VLAREIRAKGDAAAYGRICERIGQLFPERREFLLVVAEDELAAGNHAAALPLLKQFANDE
HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCC
RFNPRALYLLADASRAAGDLKTASDAYNRIVLNYPGELTACKGLLFCLRHRGDVEEALEL
CCCCEEEEEEECCCCCCCCCHHHHHHHCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHH
LKRFEPEFLSHEPETLEQFYLSLQEIAPHNEAIAEGVRRVRGTADKDVEVSGEQEQELAS
HHHCCHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
FSEDSAPLPDGSPAVPESPAAGVAEVDFDSDESLWEEEVEIGLEGDGDADLEEIELEVSV
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHEEEEEE
LDESTDWLAGPESEAPSLTDDLSLDFTEDELNDLVPPPPSVPPSPGLKGDKYGLDGLFSA
ECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHH
FKKGVGEQLDQGDTETHYNLGIAYKEMGLYDDAVAEFKAAAQDPRRLVDCITLQGICYRD
HHHHHHHHHCCCCCCCEEEEEEEHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHCCEEECC
KGEPARAEELFNSGLMLSELSPEEFLCLTYELALTLEQKGDVEKALTEYRKIADVDPAFR
CCCCHHHHHHHHCCCEEECCCCCHHEEEEEEEEEEECCCCCHHHHHHHHHHHHCCCHHHH
DTAGKLEHLGHDGLADADLVDLEETP
HHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA