| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is acnB [H]
Identifier: 39996760
GI number: 39996760
Start: 1822673
End: 1825216
Strand: Direct
Name: acnB [H]
Synonym: GSU1660
Alternate gene names: 39996760
Gene position: 1822673-1825216 (Clockwise)
Preceding gene: 39996759
Following gene: 39996763
Centisome position: 47.79
GC content: 60.89
Gene sequence:
>2544_bases ATGATCGAAGCCTATCTCGCCCACGAAGCCGAACGCAAGGCCCAGGGTATTCCCGCCCTGCCGCTGAACCCCGAGCAGAC CGCTGATCTGTGCAAGCTGCTGGAGAGCCCTCCGGCCGGAAAAGCAGAATTCCTGCTCCACCTCCTGAAGGAACGAGTCT CCCCTGGTGTTGACCCCGCTGCCAAAGTCAAGGCCGCCTTTCTGGCCGAGATCCTTGCCGGAACCAAGACATCTCCCCTT GTCTCCAAGGTTGACGCTGTCCGCATCCTGGGTACGATGATCGGCGGTTACAACGTGTCTCCTCTGGTAGAGGCCCTGAA GAGTGCAGAACTGGCCGACGAGGCCGCCTGCGCCCTTTCCGGCATGACCCTTGTCTATGACGGTTTCGATCAGGTAGTTG AGCTTAGCAAGAGCAACGCCGCCGCCAAGAAGGTTCTGGAATCCTGGGCCAACGCCGAGTGGTTCACCAATCGTCCCGGC GTACCCGAGACCATCTCGGTCAAGGTTTTCAAAGTTGAAGGCGAGATCAATACCGATGACTTCTCTCCGGCGGGCGACGC ATGGAGCCGCCCCGACATCCCGCTGCATGCGCTTGCCATGGGCAAAACCCGTTTCCCCGGTCGCCTGAAGGATATTGCCG ACTGGCGTGCCGCCGGTCACCAGGTTGCCTTTGTCGGCGACGTGGTCGGTACCGGTTCCTCCCGCAAGTCGGCCTGTAAC TCGGTCCTCTGGCACATGGGCCAGGATATCCCCTGCGTGCCCAACAAAAAGACCGCAGGCGTCATTATCGGCGGCGTCAT CGCCCCGATCTTCTTCAATACCGCCCAGGACTCCGGTGCACTGCCCCTCAAGGCCGACGTTACCAAGATGAATGACGGCG ACGTGATTACCATCAACACCAAGAAGGGGGAAATCACCAACGCTGCCGGTGAGGTCATCTCCACCTTCAAACTGAACCCC AACACCCTGGCCGACGAGTTCCGCGCCGGCGGCCGTATCCCGCTCATCATCGGCCGCGCTATTACCGAGAAAGCCCGCAA GGCCCTCGGCCTTGGCGACACCGATGTCTTCACCAAGCCGGTGAACCCTGAGCCGAAGCCTGGTCAGGGCTACTCCCTCG CCCAGAAGATGGTCGGCAAGGCCTGCGGCGTGACCGGCGTACTGCCGGGCACAGCCTGTGAGCCCAAGATGACCACGGTC GGATCCCAGGACACCACCGGCCCCATGACGGCCGACGAGCTCAAGGAACTGGCCTGCCTCAAGTTCCTCTCGCCCATGTT CATGCAGTCCTTCTGTCACACCGCCGCCTATCCGAAACCGGCAGACGTGAAGATGCACAAAACGTTGCCTGAGTTCATCA TTGAGCGTGGCGGCGTGCCCCTCAAGCCCGGCGACGGCGTCATCCACTCCTGGCTGAATCGTCTGCTGCTCCCGGACACC GTCGGTACCGGCGGTGACTCCCATACCCGGTTCCCCATCGGTATCAGCTTCCCGGCAGGTTCGGGCCTCGTGGCCTTTGC CGGCGCCATGGGCTTCATGCCGCTGGATATGCCTGAATCGGTCCTGGTCCGGTTCAAAGGCAAACTGAATCCGGGCATCA CCCTGCGCGACGTGGTCAATGCCATTCCTTACTGGGCCATCAAGCAGGGCAAGCTGACCGTGCCCAAGAAGAACAAGATC AATATCTTCAACGGCCGCATCCTTGAGATGGAAGGTCTGCCCGATCTTTCCGTGGAGCAGGCATTCGAGCTGACCGATGC CGCTGCCGAGCGTTCAGCCGCTGCCGGTTGCATCCAGCTCTCCAAGGAGTCGGTTGCCACCTATCTACGCTCCAACGTTG CCCTCATGAAGAAGATGATCGCCGACGGCTACCAGGATGCCCAGACCCTCCAGAACCGTATCGATGCGGTCAACGAGTGG CTGAAGAACCCGCAGCTTCTCGAAGCCGACAAGAACGCCGCGGAGACCGGCGCCTATGCCGATGTGATCGAGATCGATCT GGCCGAAATCACCGAGCCGATTCTGGCCTGCCCCAACGATCCGGATGACGTGAAACTCCTCTCCGATGTGGCCGGCACCC CGATCAACGACGTGTTCCTCGGCTCCTGCATGACCAATATCGGCCACTTCCGCGCCGCTGCCGAGATCTGGCGCGGCCAG AAGTTCAACCCGAGCGTCCGTACCTGGATCTGCCCGCCGACCCGCATGGATCAGCAGCAACTCAAGGATGAGGCACTTTT CTCCATCTACAGCGCCGTCGGCTGCCGGATTGAGATCGCAGGCTGCTCCCTCTGCATGGGGAACCAGGCCCGCGTTCCCG ACAAGTCAAACGTGTTCTCCACTTCCACCCGTAACTTCGACGATCGGATGGGCGACGGAGCGCAGGTATTCCTCGGCTCC GCCGAACTCGGTGCCATTTGCACCAACCTCGGCCGCATCCCGACCAAGGAGGAGTATTTCGCCGCGATCAAGGAGAAGGT GGAGCCGAAGAAGGATGCGATTTACAAATACCTGCAGTTTGACGAAATGCCTGAGTACCGGTAG
Upstream 100 bases:
>100_bases AAAATTGTATACAGTATCCATTTCCCCCTTGGGGCAAGAGCGTATCAACATCCCGAAATAACAACCTATTCAAGTAGTAA AACCACAGGAGGAATGGACT
Downstream 100 bases:
>100_bases ATCACCAGGTAGAAGCGCCTCCGCCGAAAGGCTGAGGACGTGACACGAGAGACCCCCGTTCGGGCATGCCCGGGCGGGGG TCTCTTCATATACCATGCTC
Product: bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
Products: NA
Alternate protein names: Aconitase 2; 2-methylisocitrate dehydratase; Citrate hydro-lyase 2 [H]
Number of amino acids: Translated: 847; Mature: 847
Protein sequence:
>847_residues MIEAYLAHEAERKAQGIPALPLNPEQTADLCKLLESPPAGKAEFLLHLLKERVSPGVDPAAKVKAAFLAEILAGTKTSPL VSKVDAVRILGTMIGGYNVSPLVEALKSAELADEAACALSGMTLVYDGFDQVVELSKSNAAAKKVLESWANAEWFTNRPG VPETISVKVFKVEGEINTDDFSPAGDAWSRPDIPLHALAMGKTRFPGRLKDIADWRAAGHQVAFVGDVVGTGSSRKSACN SVLWHMGQDIPCVPNKKTAGVIIGGVIAPIFFNTAQDSGALPLKADVTKMNDGDVITINTKKGEITNAAGEVISTFKLNP NTLADEFRAGGRIPLIIGRAITEKARKALGLGDTDVFTKPVNPEPKPGQGYSLAQKMVGKACGVTGVLPGTACEPKMTTV GSQDTTGPMTADELKELACLKFLSPMFMQSFCHTAAYPKPADVKMHKTLPEFIIERGGVPLKPGDGVIHSWLNRLLLPDT VGTGGDSHTRFPIGISFPAGSGLVAFAGAMGFMPLDMPESVLVRFKGKLNPGITLRDVVNAIPYWAIKQGKLTVPKKNKI NIFNGRILEMEGLPDLSVEQAFELTDAAAERSAAAGCIQLSKESVATYLRSNVALMKKMIADGYQDAQTLQNRIDAVNEW LKNPQLLEADKNAAETGAYADVIEIDLAEITEPILACPNDPDDVKLLSDVAGTPINDVFLGSCMTNIGHFRAAAEIWRGQ KFNPSVRTWICPPTRMDQQQLKDEALFSIYSAVGCRIEIAGCSLCMGNQARVPDKSNVFSTSTRNFDDRMGDGAQVFLGS AELGAICTNLGRIPTKEEYFAAIKEKVEPKKDAIYKYLQFDEMPEYR
Sequences:
>Translated_847_residues MIEAYLAHEAERKAQGIPALPLNPEQTADLCKLLESPPAGKAEFLLHLLKERVSPGVDPAAKVKAAFLAEILAGTKTSPL VSKVDAVRILGTMIGGYNVSPLVEALKSAELADEAACALSGMTLVYDGFDQVVELSKSNAAAKKVLESWANAEWFTNRPG VPETISVKVFKVEGEINTDDFSPAGDAWSRPDIPLHALAMGKTRFPGRLKDIADWRAAGHQVAFVGDVVGTGSSRKSACN SVLWHMGQDIPCVPNKKTAGVIIGGVIAPIFFNTAQDSGALPLKADVTKMNDGDVITINTKKGEITNAAGEVISTFKLNP NTLADEFRAGGRIPLIIGRAITEKARKALGLGDTDVFTKPVNPEPKPGQGYSLAQKMVGKACGVTGVLPGTACEPKMTTV GSQDTTGPMTADELKELACLKFLSPMFMQSFCHTAAYPKPADVKMHKTLPEFIIERGGVPLKPGDGVIHSWLNRLLLPDT VGTGGDSHTRFPIGISFPAGSGLVAFAGAMGFMPLDMPESVLVRFKGKLNPGITLRDVVNAIPYWAIKQGKLTVPKKNKI NIFNGRILEMEGLPDLSVEQAFELTDAAAERSAAAGCIQLSKESVATYLRSNVALMKKMIADGYQDAQTLQNRIDAVNEW LKNPQLLEADKNAAETGAYADVIEIDLAEITEPILACPNDPDDVKLLSDVAGTPINDVFLGSCMTNIGHFRAAAEIWRGQ KFNPSVRTWICPPTRMDQQQLKDEALFSIYSAVGCRIEIAGCSLCMGNQARVPDKSNVFSTSTRNFDDRMGDGAQVFLGS AELGAICTNLGRIPTKEEYFAAIKEKVEPKKDAIYKYLQFDEMPEYR >Mature_847_residues MIEAYLAHEAERKAQGIPALPLNPEQTADLCKLLESPPAGKAEFLLHLLKERVSPGVDPAAKVKAAFLAEILAGTKTSPL VSKVDAVRILGTMIGGYNVSPLVEALKSAELADEAACALSGMTLVYDGFDQVVELSKSNAAAKKVLESWANAEWFTNRPG VPETISVKVFKVEGEINTDDFSPAGDAWSRPDIPLHALAMGKTRFPGRLKDIADWRAAGHQVAFVGDVVGTGSSRKSACN SVLWHMGQDIPCVPNKKTAGVIIGGVIAPIFFNTAQDSGALPLKADVTKMNDGDVITINTKKGEITNAAGEVISTFKLNP NTLADEFRAGGRIPLIIGRAITEKARKALGLGDTDVFTKPVNPEPKPGQGYSLAQKMVGKACGVTGVLPGTACEPKMTTV GSQDTTGPMTADELKELACLKFLSPMFMQSFCHTAAYPKPADVKMHKTLPEFIIERGGVPLKPGDGVIHSWLNRLLLPDT VGTGGDSHTRFPIGISFPAGSGLVAFAGAMGFMPLDMPESVLVRFKGKLNPGITLRDVVNAIPYWAIKQGKLTVPKKNKI NIFNGRILEMEGLPDLSVEQAFELTDAAAERSAAAGCIQLSKESVATYLRSNVALMKKMIADGYQDAQTLQNRIDAVNEW LKNPQLLEADKNAAETGAYADVIEIDLAEITEPILACPNDPDDVKLLSDVAGTPINDVFLGSCMTNIGHFRAAAEIWRGQ KFNPSVRTWICPPTRMDQQQLKDEALFSIYSAVGCRIEIAGCSLCMGNQARVPDKSNVFSTSTRNFDDRMGDGAQVFLGS AELGAICTNLGRIPTKEEYFAAIKEKVEPKKDAIYKYLQFDEMPEYR
Specific function: Catalyzes the isomerization of citrate to isocitrate via cis-aconitate as well as the dehydration of 2-methylisocitrate to cis-2-methylaconitate [H]
COG id: COG1049
COG function: function code C; Aconitase B
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aconitase/IPM isomerase family [H]
Homologues:
Organism=Escherichia coli, GI2367097, Length=858, Percent_Identity=60.7226107226107, Blast_Score=1007, Evalue=0.0, Organism=Escherichia coli, GI1786259, Length=366, Percent_Identity=28.4153005464481, Blast_Score=95, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015931 - InterPro: IPR015937 - InterPro: IPR001030 - InterPro: IPR015928 - InterPro: IPR018136 - InterPro: IPR004406 - InterPro: IPR015930 - InterPro: IPR015933 - InterPro: IPR015929 [H]
Pfam domain/function: PF00330 Aconitase; PF06434 Aconitase_2_N; PF11791 Aconitase_B_N [H]
EC number: =4.2.1.3; =4.2.1.99 [H]
Molecular weight: Translated: 91140; Mature: 91140
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: PS00450 ACONITASE_1 ; PS01244 ACONITASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEAYLAHEAERKAQGIPALPLNPEQTADLCKLLESPPAGKAEFLLHLLKERVSPGVDPA CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHH AKVKAAFLAEILAGTKTSPLVSKVDAVRILGTMIGGYNVSPLVEALKSAELADEAACALS HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC GMTLVYDGFDQVVELSKSNAAAKKVLESWANAEWFTNRPGVPETISVKVFKVEGEINTDD CCEEEECCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCCC FSPAGDAWSRPDIPLHALAMGKTRFPGRLKDIADWRAAGHQVAFVGDVVGTGSSRKSACN CCCCCCCCCCCCCCEEHEECCCCCCCCHHHHHHHHHHCCCEEEEEEHHHCCCCCHHHHHH SVLWHMGQDIPCVPNKKTAGVIIGGVIAPIFFNTAQDSGALPLKADVTKMNDGDVITINT HHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCEEECCEECCCCCEEEEEC KKGEITNAAGEVISTFKLNPNTLADEFRAGGRIPLIIGRAITEKARKALGLGDTDVFTKP CCCCCHHHHHHHHHHEECCCHHHHHHHHCCCCCEEEECHHHHHHHHHHHCCCCCCCEECC VNPEPKPGQGYSLAQKMVGKACGVTGVLPGTACEPKMTTVGSQDTTGPMTADELKELACL CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHH KFLSPMFMQSFCHTAAYPKPADVKMHKTLPEFIIERGGVPLKPGDGVIHSWLNRLLLPDT HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCC VGTGGDSHTRFPIGISFPAGSGLVAFAGAMGFMPLDMPESVLVRFKGKLNPGITLRDVVN CCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCHHHHHEECCCCCCCEEHHHHHH AIPYWAIKQGKLTVPKKNKINIFNGRILEMEGLPDLSVEQAFELTDAAAERSAAAGCIQL HCCCEEEECCEEECCCCCCEEEECCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH SKESVATYLRSNVALMKKMIADGYQDAQTLQNRIDAVNEWLKNPQLLEADKNAAETGAYA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHCCCCH DVIEIDLAEITEPILACPNDPDDVKLLSDVAGTPINDVFLGSCMTNIGHFRAAAEIWRGQ HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC KFNPSVRTWICPPTRMDQQQLKDEALFSIYSAVGCRIEIAGCSLCMGNQARVPDKSNVFS CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCEEECCCCCCCCCCCCCCC TSTRNFDDRMGDGAQVFLGSAELGAICTNLGRIPTKEEYFAAIKEKVEPKKDAIYKYLQF CCCCCCHHHCCCCCEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH DEMPEYR CCCCCCC >Mature Secondary Structure MIEAYLAHEAERKAQGIPALPLNPEQTADLCKLLESPPAGKAEFLLHLLKERVSPGVDPA CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHH AKVKAAFLAEILAGTKTSPLVSKVDAVRILGTMIGGYNVSPLVEALKSAELADEAACALS HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC GMTLVYDGFDQVVELSKSNAAAKKVLESWANAEWFTNRPGVPETISVKVFKVEGEINTDD CCEEEECCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCCC FSPAGDAWSRPDIPLHALAMGKTRFPGRLKDIADWRAAGHQVAFVGDVVGTGSSRKSACN CCCCCCCCCCCCCCEEHEECCCCCCCCHHHHHHHHHHCCCEEEEEEHHHCCCCCHHHHHH SVLWHMGQDIPCVPNKKTAGVIIGGVIAPIFFNTAQDSGALPLKADVTKMNDGDVITINT HHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCEEECCEECCCCCEEEEEC KKGEITNAAGEVISTFKLNPNTLADEFRAGGRIPLIIGRAITEKARKALGLGDTDVFTKP CCCCCHHHHHHHHHHEECCCHHHHHHHHCCCCCEEEECHHHHHHHHHHHCCCCCCCEECC VNPEPKPGQGYSLAQKMVGKACGVTGVLPGTACEPKMTTVGSQDTTGPMTADELKELACL CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHH KFLSPMFMQSFCHTAAYPKPADVKMHKTLPEFIIERGGVPLKPGDGVIHSWLNRLLLPDT HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCC VGTGGDSHTRFPIGISFPAGSGLVAFAGAMGFMPLDMPESVLVRFKGKLNPGITLRDVVN CCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCHHHHHEECCCCCCCEEHHHHHH AIPYWAIKQGKLTVPKKNKINIFNGRILEMEGLPDLSVEQAFELTDAAAERSAAAGCIQL HCCCEEEECCEEECCCCCCEEEECCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH SKESVATYLRSNVALMKKMIADGYQDAQTLQNRIDAVNEWLKNPQLLEADKNAAETGAYA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHCCCCH DVIEIDLAEITEPILACPNDPDDVKLLSDVAGTPINDVFLGSCMTNIGHFRAAAEIWRGQ HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC KFNPSVRTWICPPTRMDQQQLKDEALFSIYSAVGCRIEIAGCSLCMGNQARVPDKSNVFS CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCEEECCCCCCCCCCCCCCC TSTRNFDDRMGDGAQVFLGSAELGAICTNLGRIPTKEEYFAAIKEKVEPKKDAIYKYLQF CCCCCCHHHCCCCCEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH DEMPEYR CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]