Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

Click here to switch to the map view.

The map label for this gene is 39996669

Identifier: 39996669

GI number: 39996669

Start: 1722264

End: 1722479

Strand: Direct

Name: 39996669

Synonym: GSU1569

Alternate gene names: NA

Gene position: 1722264-1722479 (Clockwise)

Preceding gene: 39996668

Following gene: 39996670

Centisome position: 45.15

GC content: 49.54

Gene sequence:

>216_bases
ATGCCCCACTTCAGAAAAGATTGCAGCACTAAAGAGAAAAAAGCACGCCGTACTTTGGGTAATCGGCTCGACAACGTGAT
TTCCATAAGAATCAGCGACCAGGAAAAACGCAATCTTGAGCGCCTTATCAAGCGTTCTTCCAAGAGTGTCTCGGAGGTCA
TGCGGGAGGCACTGGAGCTCTGGTCGTACAAGCAGCGTGCTCTATTCAGCGAGTAA

Upstream 100 bases:

>100_bases
ATCGTTTCTGGAAGAACTGTTTGACTGAAACCAGAGCGAAAGAGCGGTCCCAAGTGGATTCAAGCCAGCCTTGTCAACAC
TATAGCGAAAGGAGACGCTC

Downstream 100 bases:

>100_bases
CAGCGAGTCCAGTCTGGAAGTCTGGCCAGTGTCCGTCCGGAGTCTCCGGCTGGACACTGGCCGGTTATCCGAGCAGCCAT
TCAACTGGCTCGTGCATTGA

Product: CopG family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 71; Mature: 70

Protein sequence:

>71_residues
MPHFRKDCSTKEKKARRTLGNRLDNVISIRISDQEKRNLERLIKRSSKSVSEVMREALELWSYKQRALFSE

Sequences:

>Translated_71_residues
MPHFRKDCSTKEKKARRTLGNRLDNVISIRISDQEKRNLERLIKRSSKSVSEVMREALELWSYKQRALFSE
>Mature_70_residues
PHFRKDCSTKEKKARRTLGNRLDNVISIRISDQEKRNLERLIKRSSKSVSEVMREALELWSYKQRALFSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8495; Mature: 8364

Theoretical pI: Translated: 10.98; Mature: 10.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHFRKDCSTKEKKARRTLGNRLDNVISIRISDQEKRNLERLIKRSSKSVSEVMREALEL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHCCHHHHHHHHHHHHH
WSYKQRALFSE
HHHHHHHHCCC
>Mature Secondary Structure 
PHFRKDCSTKEKKARRTLGNRLDNVISIRISDQEKRNLERLIKRSSKSVSEVMREALEL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHCCHHHHHHHHHHHHH
WSYKQRALFSE
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA