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The map label for this gene is atoS [C]

Identifier: 39996629

GI number: 39996629

Start: 1675821

End: 1678232

Strand: Direct

Name: atoS [C]

Synonym: GSU1529

Alternate gene names: 39996629

Gene position: 1675821-1678232 (Clockwise)

Preceding gene: 39996628

Following gene: 39996632

Centisome position: 43.94

GC content: 58.75

Gene sequence:

>2412_bases
GTGGGCTACTTTTTTTCCGAGCAGTTGGACTACATGGGCGACCTTGCCCAATGCCGGGAGCTGTCAGCCTATTTTGAAAA
CAAGGCCCTCGGCATGTCCATGGAGTATGGCCTTCGCGCCAGCAGCCTGCTGATAACCGAGCGTTTCGACAAGGTTCGCC
GGGTGAAAAGGCTCGGCGATCATCCCCTGTACAAGCGCATCGTTTTTCTCGACGCGAACGGCAGGCTGCTGAACGACAGC
CGGTCACCGGATTACCGGTGGCAGCAGGAGGTAAGCCGGCTGTCCGCCACATCACCCCGAGGACAGAAGTCGGCCATCTA
TTACGTCAGCGATGCCGAGACAAACTGGATCATCATATCGGTTCCCTCGTTTTTCAAGGAACGGTATGTGGGCCAGGTCA
TGGGATGGATTCCCTTTTCCCGGATCTACACCTATTTCTTTGAGCCGGAAAAGGAGTTTTCCCGCGTATCGGATGTAATC
ATCTACCATGGGACATACATTCATGTCCCCCCGCCAGTGGGACATCTTCTCTCCGCCGGCATCCCGACCCCGCCGGCCGG
CATGGAGCCGGGCCGGCCGTATTCCTTCCCACTGAAGGGACAAGAGTTCCGGGGAAAGACGATTTACGCCATTCTCGCAC
CGGTCAGGGACACCCCCTTTTCGCTGATGGCCATTGTCCCGCCGTCGGAGCAGTACGATTTCCGCTCACCGAAGCAGCTC
CTCTATACAACCATCGGCCTGGCGTTGTTCATCGTGGGGGGGATCGCGTTCCTGCTCCGGCTCACCACCAACAATGCACT
GTTACAGGCACACCTGGAGGAAACCCGGCTCCGCGAGCAGGCAGTGGATGCTAAAAACCGCGAACTTGCAGCTGAAATTC
GTGAACGTCAGCTCGCTGAGGCCTTTTTGCAGAAGGAGCGGGATTTTGTGGAAAGCCTGTTCGAGACCGCCCAGGTTATC
ATGCTGGTGCTTGATACCGACGGACGGGTCGAGCGCTTCAATTCCTATCTGGAGGAGATTTCCGGATACCACCTGGAAGA
GGTGCGCGGCAAGGACGTGTCCGTGTTGCTCCCTGAAGAACTCAGGGACCATCCGGACTCACTGTACCGGATGATACTGC
AAGGCACCGGCATGACGGGGCGTATCTGCCCGATCATCACCAGGGACGGCCGCAAGCGGGAAATCGAATGGCACGTGAAA
AGGCTCCTGGATACCGATGCCCGCCAGGTGGGGGTTCTCGCCACCGGGCAAGACGTCACCGAGCGCACGATCATGGAAAA
GGAGCTGCTGAAGGCGGCCAAGCTGGAATCCCTCGGCGTACTGGCCGGCGGCATCGCCCATGATTTCAATAATCTTCTGA
CCGTCATCATGGGCAATATCTCCCTGGCGCTCACACAGCTCGACTCCCCCGACAAGGTGAAAGAGTATCTGGCAAAAAGT
GAAAAGGCCTCATTCCGCGCCCAGGATCTCACCCGGCAGTTGCTCACCTTTGCCAAGGGAGGAGCCCCCGTCAAAACCGC
GTCCTCCATCACTACCGTCATCAGGGAGTCTGCCGAATTTGCCATGAGGGGGTCCAGCGTTCGCTGCGAGTTCTCGATTT
CTTCCGACCTCTGGCCGGTCGACATCGACGCGGGCCAGATCAGCCAGGTCCTGCACAATCTTTTCATCAATGCCAATCAG
GCAATGCCCGCCGGTGGCGTCATCCAGACGCACTGCGAGAACGTCGTCATCGGGCCGGAGGAGGCGCTTCCCCTTCAGGC
AGGCAGGTACGTAAAGGTTTCTATCATCGATCAGGGCGTCGGCATCCCCGAGGAGAATCTCGGCAAGGTCTTCGATCCCT
ACTTTACGACCAAAGCGCAGGGCAGCGGTCTCGGCCTGGCGTCCAGCTTTTCCATCGTGACACAGCACGGCGGTACGATT
ACCGTGGAGTCTGCAGAGGGGCGCGGCACGACCTTCCATATCTTTCTTCCCGCTTCATCAAAAGAACTGCGGCAGAAGCA
GGTCAGGCGCGAGGCGGTGGCTCCGGCCTGCGGCAGGATCCTGGTCATGGATGATGAAGAGGAGGTGAGGGATGTGATCG
GCAACATGCTCAGAAGCGCCGGCTGCGAGGTGGAGTTCGCCCAGGGGGGCGAAGAGGCCATCGACCGGTACAAAGAGTCC
TTGGCCAAGGGGTGCCCGTTCGACGTGCTGATCATGGACCTGACGATTCCCGGCCGGATGGGGGGGAAGGAGGCCATCGC
GATCCTTCGGCAGATAAACCCGCAGGTGAAGGCGATCGTCTCGACCGGCTACTCCAATGACTCAGTCATGGCCAATTACA
GGGAATACGGTTTCGATGAGCTGATCACCAAGCCGTTCAAGGTGGCTGAACTTTCGGAAAAGCTCAGGCTGGTTCTTGCC
GGCGGCCCGTGA

Upstream 100 bases:

>100_bases
CATTGTCTATCTGGTTGTCGTCCAGTACAACTCGCAGATCGCCCGCCAACAGGCGGCATTGCAGGAGGCGGGCTCCGATT
GCGAGCGCCGGGCGACAGCA

Downstream 100 bases:

>100_bases
CGTAAGTCATCGGCAGAGCTCGAACACAAAGGGCCTGCACCCGGACGGGGCAGGCCCTTTTGTGTGCAACAGCCGGTTTC
CCGGCGTTAGATGATCTTGT

Product: sensory box histidine kinase/response regulator

Products: NA

Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]

Number of amino acids: Translated: 803; Mature: 802

Protein sequence:

>803_residues
MGYFFSEQLDYMGDLAQCRELSAYFENKALGMSMEYGLRASSLLITERFDKVRRVKRLGDHPLYKRIVFLDANGRLLNDS
RSPDYRWQQEVSRLSATSPRGQKSAIYYVSDAETNWIIISVPSFFKERYVGQVMGWIPFSRIYTYFFEPEKEFSRVSDVI
IYHGTYIHVPPPVGHLLSAGIPTPPAGMEPGRPYSFPLKGQEFRGKTIYAILAPVRDTPFSLMAIVPPSEQYDFRSPKQL
LYTTIGLALFIVGGIAFLLRLTTNNALLQAHLEETRLREQAVDAKNRELAAEIRERQLAEAFLQKERDFVESLFETAQVI
MLVLDTDGRVERFNSYLEEISGYHLEEVRGKDVSVLLPEELRDHPDSLYRMILQGTGMTGRICPIITRDGRKREIEWHVK
RLLDTDARQVGVLATGQDVTERTIMEKELLKAAKLESLGVLAGGIAHDFNNLLTVIMGNISLALTQLDSPDKVKEYLAKS
EKASFRAQDLTRQLLTFAKGGAPVKTASSITTVIRESAEFAMRGSSVRCEFSISSDLWPVDIDAGQISQVLHNLFINANQ
AMPAGGVIQTHCENVVIGPEEALPLQAGRYVKVSIIDQGVGIPEENLGKVFDPYFTTKAQGSGLGLASSFSIVTQHGGTI
TVESAEGRGTTFHIFLPASSKELRQKQVRREAVAPACGRILVMDDEEEVRDVIGNMLRSAGCEVEFAQGGEEAIDRYKES
LAKGCPFDVLIMDLTIPGRMGGKEAIAILRQINPQVKAIVSTGYSNDSVMANYREYGFDELITKPFKVAELSEKLRLVLA
GGP

Sequences:

>Translated_803_residues
MGYFFSEQLDYMGDLAQCRELSAYFENKALGMSMEYGLRASSLLITERFDKVRRVKRLGDHPLYKRIVFLDANGRLLNDS
RSPDYRWQQEVSRLSATSPRGQKSAIYYVSDAETNWIIISVPSFFKERYVGQVMGWIPFSRIYTYFFEPEKEFSRVSDVI
IYHGTYIHVPPPVGHLLSAGIPTPPAGMEPGRPYSFPLKGQEFRGKTIYAILAPVRDTPFSLMAIVPPSEQYDFRSPKQL
LYTTIGLALFIVGGIAFLLRLTTNNALLQAHLEETRLREQAVDAKNRELAAEIRERQLAEAFLQKERDFVESLFETAQVI
MLVLDTDGRVERFNSYLEEISGYHLEEVRGKDVSVLLPEELRDHPDSLYRMILQGTGMTGRICPIITRDGRKREIEWHVK
RLLDTDARQVGVLATGQDVTERTIMEKELLKAAKLESLGVLAGGIAHDFNNLLTVIMGNISLALTQLDSPDKVKEYLAKS
EKASFRAQDLTRQLLTFAKGGAPVKTASSITTVIRESAEFAMRGSSVRCEFSISSDLWPVDIDAGQISQVLHNLFINANQ
AMPAGGVIQTHCENVVIGPEEALPLQAGRYVKVSIIDQGVGIPEENLGKVFDPYFTTKAQGSGLGLASSFSIVTQHGGTI
TVESAEGRGTTFHIFLPASSKELRQKQVRREAVAPACGRILVMDDEEEVRDVIGNMLRSAGCEVEFAQGGEEAIDRYKES
LAKGCPFDVLIMDLTIPGRMGGKEAIAILRQINPQVKAIVSTGYSNDSVMANYREYGFDELITKPFKVAELSEKLRLVLA
GGP
>Mature_802_residues
GYFFSEQLDYMGDLAQCRELSAYFENKALGMSMEYGLRASSLLITERFDKVRRVKRLGDHPLYKRIVFLDANGRLLNDSR
SPDYRWQQEVSRLSATSPRGQKSAIYYVSDAETNWIIISVPSFFKERYVGQVMGWIPFSRIYTYFFEPEKEFSRVSDVII
YHGTYIHVPPPVGHLLSAGIPTPPAGMEPGRPYSFPLKGQEFRGKTIYAILAPVRDTPFSLMAIVPPSEQYDFRSPKQLL
YTTIGLALFIVGGIAFLLRLTTNNALLQAHLEETRLREQAVDAKNRELAAEIRERQLAEAFLQKERDFVESLFETAQVIM
LVLDTDGRVERFNSYLEEISGYHLEEVRGKDVSVLLPEELRDHPDSLYRMILQGTGMTGRICPIITRDGRKREIEWHVKR
LLDTDARQVGVLATGQDVTERTIMEKELLKAAKLESLGVLAGGIAHDFNNLLTVIMGNISLALTQLDSPDKVKEYLAKSE
KASFRAQDLTRQLLTFAKGGAPVKTASSITTVIRESAEFAMRGSSVRCEFSISSDLWPVDIDAGQISQVLHNLFINANQA
MPAGGVIQTHCENVVIGPEEALPLQAGRYVKVSIIDQGVGIPEENLGKVFDPYFTTKAQGSGLGLASSFSIVTQHGGTIT
VESAEGRGTTFHIFLPASSKELRQKQVRREAVAPACGRILVMDDEEEVRDVIGNMLRSAGCEVEFAQGGEEAIDRYKESL
AKGCPFDVLIMDLTIPGRMGGKEAIAILRQINPQVKAIVSTGYSNDSVMANYREYGFDELITKPFKVAELSEKLRLVLAG
GP

Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=375, Percent_Identity=30.6666666666667, Blast_Score=139, Evalue=9e-34,
Organism=Escherichia coli, GI1790436, Length=241, Percent_Identity=33.195020746888, Blast_Score=127, Evalue=2e-30,
Organism=Escherichia coli, GI48994928, Length=544, Percent_Identity=23.1617647058824, Blast_Score=95, Evalue=2e-20,
Organism=Escherichia coli, GI1788713, Length=527, Percent_Identity=25.0474383301708, Blast_Score=75, Evalue=2e-14,
Organism=Escherichia coli, GI1786783, Length=229, Percent_Identity=26.6375545851528, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1790300, Length=242, Percent_Identity=28.9256198347107, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI87081816, Length=271, Percent_Identity=24.3542435424354, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011006
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 89515; Mature: 89384

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYFFSEQLDYMGDLAQCRELSAYFENKALGMSMEYGLRASSLLITERFDKVRRVKRLGD
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCC
HPLYKRIVFLDANGRLLNDSRSPDYRWQQEVSRLSATSPRGQKSAIYYVSDAETNWIIIS
CCCEEEEEEECCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEE
VPSFFKERYVGQVMGWIPFSRIYTYFFEPEKEFSRVSDVIIYHGTYIHVPPPVGHLLSAG
CCHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCEEEECCEEEECCCCHHHHHHCC
IPTPPAGMEPGRPYSFPLKGQEFRGKTIYAILAPVRDTPFSLMAIVPPSEQYDFRSPKQL
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHH
LYTTIGLALFIVGGIAFLLRLTTNNALLQAHLEETRLREQAVDAKNRELAAEIRERQLAE
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
AFLQKERDFVESLFETAQVIMLVLDTDGRVERFNSYLEEISGYHLEEVRGKDVSVLLPEE
HHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHCCCCHHHHCCCCEEEECCHH
LRDHPDSLYRMILQGTGMTGRICPIITRDGRKREIEWHVKRLLDTDARQVGVLATGQDVT
HHCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCHHEEEEECCCCHH
ERTIMEKELLKAAKLESLGVLAGGIAHDFNNLLTVIMGNISLALTQLDSPDKVKEYLAKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHH
EKASFRAQDLTRQLLTFAKGGAPVKTASSITTVIRESAEFAMRGSSVRCEFSISSDLWPV
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEE
DIDAGQISQVLHNLFINANQAMPAGGVIQTHCENVVIGPEEALPLQAGRYVKVSIIDQGV
ECCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCEEECCCCCCCCCCCCEEEEEEEECCC
GIPEENLGKVFDPYFTTKAQGSGLGLASSFSIVTQHGGTITVESAEGRGTTFHIFLPASS
CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCEEEEEECCCH
KELRQKQVRREAVAPACGRILVMDDEEEVRDVIGNMLRSAGCEVEFAQGGEEAIDRYKES
HHHHHHHHHHHHCCHHHCEEEEECCHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHH
LAKGCPFDVLIMDLTIPGRMGGKEAIAILRQINPQVKAIVSTGYSNDSVMANYREYGFDE
HHCCCCEEEEEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHCCHHH
LITKPFKVAELSEKLRLVLAGGP
HHCCCHHHHHHHCCEEEEECCCC
>Mature Secondary Structure 
GYFFSEQLDYMGDLAQCRELSAYFENKALGMSMEYGLRASSLLITERFDKVRRVKRLGD
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCC
HPLYKRIVFLDANGRLLNDSRSPDYRWQQEVSRLSATSPRGQKSAIYYVSDAETNWIIIS
CCCEEEEEEECCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEE
VPSFFKERYVGQVMGWIPFSRIYTYFFEPEKEFSRVSDVIIYHGTYIHVPPPVGHLLSAG
CCHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCEEEECCEEEECCCCHHHHHHCC
IPTPPAGMEPGRPYSFPLKGQEFRGKTIYAILAPVRDTPFSLMAIVPPSEQYDFRSPKQL
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHH
LYTTIGLALFIVGGIAFLLRLTTNNALLQAHLEETRLREQAVDAKNRELAAEIRERQLAE
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
AFLQKERDFVESLFETAQVIMLVLDTDGRVERFNSYLEEISGYHLEEVRGKDVSVLLPEE
HHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHCCCCHHHHCCCCEEEECCHH
LRDHPDSLYRMILQGTGMTGRICPIITRDGRKREIEWHVKRLLDTDARQVGVLATGQDVT
HHCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCHHEEEEECCCCHH
ERTIMEKELLKAAKLESLGVLAGGIAHDFNNLLTVIMGNISLALTQLDSPDKVKEYLAKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHH
EKASFRAQDLTRQLLTFAKGGAPVKTASSITTVIRESAEFAMRGSSVRCEFSISSDLWPV
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEE
DIDAGQISQVLHNLFINANQAMPAGGVIQTHCENVVIGPEEALPLQAGRYVKVSIIDQGV
ECCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCEEECCCCCCCCCCCCEEEEEEEECCC
GIPEENLGKVFDPYFTTKAQGSGLGLASSFSIVTQHGGTITVESAEGRGTTFHIFLPASS
CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCEEEEEECCCH
KELRQKQVRREAVAPACGRILVMDDEEEVRDVIGNMLRSAGCEVEFAQGGEEAIDRYKES
HHHHHHHHHHHHCCHHHCEEEEECCHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHH
LAKGCPFDVLIMDLTIPGRMGGKEAIAILRQINPQVKAIVSTGYSNDSVMANYREYGFDE
HHCCCCEEEEEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHCCHHH
LITKPFKVAELSEKLRLVLAGGP
HHCCCHHHHHHHCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA