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The map label for this gene is 39996598

Identifier: 39996598

GI number: 39996598

Start: 1642999

End: 1644747

Strand: Direct

Name: 39996598

Synonym: GSU1498

Alternate gene names: NA

Gene position: 1642999-1644747 (Clockwise)

Preceding gene: 39996597

Following gene: 39996599

Centisome position: 43.08

GC content: 43.8

Gene sequence:

>1749_bases
ATGAATAAAAAGATAAAATCCATCAATGATTTAAACCGCGGTGCAACATCTGGTGATGACTTGTTGGATTGGGTCAGTCT
CGTAGTTGTCGGAATAGTTGTTACACTTGCGTATTTGCCGGCTCTTACATCTGGTTTCTTGAGTCTTGACGATATTGCTC
TCGTCAAGACATTCATGACTTCTGAAATATCGTTGAAGTCTCTTTTTGTCGGCGCAAGTGGCGACTATTTCAGGCCGATT
ACCATACTGTCCTACTTCCTGGATGTCAAGGCGGGAGATGCGGATCCACTTATCTCTCACATTCTTAATGTTGGATTGCA
TCTTTTTAACACGTTCCTTGTATTTGTATTGTCTCGTGCTTATCTGAACAAAGTTACCGATTCCAGATGGCCCTCTCTCG
CGGCCGCTCTTATTTTCGGTCTTTCCCCGCTCAATACGGAATCTGTGGTGTGGGTTTCAGGAAGAACCGACTTGCTCTGT
TGTTTCTTTTTTTTACTTAGCCTTAATCTTATCATCGCTAAGAATACTTTTCCTCAGTTGTTGACTGCCGGAGCCATCAG
TATTTGTTTTCTCTGTTCTCTCCTGGCTAAAGAATCTTCAATTGCTCTTTTGGGAATAGTTCCATTTTTTCTGTGGTCAG
GGCAAAATTCTGGTATGGGAAGCAGGCGGTTTCTGGTCCTGATTGCAATGGGAAGTGCTCTCGCAGCTTATCTTATTCTG
AGATTTGGAATAGATTTTTCCGTTGATAACGGTGTCGCAAAAGTAGTTGAAGGGGGAAAAACAAAGAGCATCAGCATGTT
GTTATATGAAAGCATCGTTGCAATGGGATTTTATTTCAGCAAGCTATTGTGGCCATTTCCTCTTAATTTTGCCATAGTGT
CGATTAATCGGCCGTTATCTGCCGTAATCGCCTTTGCCGGCATTTTTTCGTTGAGTTGTCTTTACCTTCGAGTTGCCATT
ACTCGCTTACCTATTCTCATTATGGTCATGTGTATAATCCCACCAATTATGGCAATACATGGGAAACTTGCGTGGACTCC
CTATGCCGAGAGGTACCTCTATCTCCCCATGGTTGGGTTCGCGATGTTTGCTGGATGGGCAGTGACTCAATTGCCTAAGA
GGCTAGCCTCTTTTGCGGTGATCGCATTACTTCTTCTTGCGTTTCCAACCCTCTCGCGAGCAGTAATTTGGTCAAATTCA
GAAGTTTTCTGGCGTGAGACAATAGAAAAGTCTCCCGAATTTCCCCGAAGTTACGTCGGTTATGCGGCAGAGCTAATAAA
GCTAAGGCGGTATGATGAGGCTGAACAGAACCTGAAGCGCGCTCTTGACATGAAATATGAGACATATTTTGTATGGCAGA
ATCTGGCAACTATTTATCAGGAGCGCGGTGATCATTCTCAATACGAGAATGCCATGTTGCGCGCAATCTCACTCTCCAAA
ACACCGACAGAGTTATACATAAAGCTGATCCAGAATCTCCTTTGGCACGGAACTAAGAGCGAAAACTCCCGGAAAGCCTA
CCAAAAAGCTGCAAACTATTATCTGCTCGCGTATGAGAAGGATAAGAATTTCGGAGAAGGTTTATATAATGCGGCCAAAC
TCTATTTGATCCTTGGTGATCAACGCAAGGCACGTTGTTATTTCGAGCTCTTTCTGGCTCATCCGGGAGACAGCCTTTAT
AGGCCAGCTGCCAGGAAAATGCTGGATAAAATAGTAACACATGATAATCTTGGTGGAGCTGCCATATGA

Upstream 100 bases:

>100_bases
GATTTTTCTGGTACCGAGTGGAAGTCGCAGTAGTCATATCGGATAACTGATTGAAAAAGGGGGGCATGTTTATGCCCCCC
TTTTTCAATCATGAGCTTTT

Downstream 100 bases:

>100_bases
CACAAATAATCGTACTGTCTGTCAAAGGTATTATAAGGGATAGAGTGCTGCATGGAGTAGGTATAGTTTCGTTGTTTTTA
CTCTTTATCCCCTCCCTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; O-GlcNAc Transferase

Number of amino acids: Translated: 582; Mature: 582

Protein sequence:

>582_residues
MNKKIKSINDLNRGATSGDDLLDWVSLVVVGIVVTLAYLPALTSGFLSLDDIALVKTFMTSEISLKSLFVGASGDYFRPI
TILSYFLDVKAGDADPLISHILNVGLHLFNTFLVFVLSRAYLNKVTDSRWPSLAAALIFGLSPLNTESVVWVSGRTDLLC
CFFFLLSLNLIIAKNTFPQLLTAGAISICFLCSLLAKESSIALLGIVPFFLWSGQNSGMGSRRFLVLIAMGSALAAYLIL
RFGIDFSVDNGVAKVVEGGKTKSISMLLYESIVAMGFYFSKLLWPFPLNFAIVSINRPLSAVIAFAGIFSLSCLYLRVAI
TRLPILIMVMCIIPPIMAIHGKLAWTPYAERYLYLPMVGFAMFAGWAVTQLPKRLASFAVIALLLLAFPTLSRAVIWSNS
EVFWRETIEKSPEFPRSYVGYAAELIKLRRYDEAEQNLKRALDMKYETYFVWQNLATIYQERGDHSQYENAMLRAISLSK
TPTELYIKLIQNLLWHGTKSENSRKAYQKAANYYLLAYEKDKNFGEGLYNAAKLYLILGDQRKARCYFELFLAHPGDSLY
RPAARKMLDKIVTHDNLGGAAI

Sequences:

>Translated_582_residues
MNKKIKSINDLNRGATSGDDLLDWVSLVVVGIVVTLAYLPALTSGFLSLDDIALVKTFMTSEISLKSLFVGASGDYFRPI
TILSYFLDVKAGDADPLISHILNVGLHLFNTFLVFVLSRAYLNKVTDSRWPSLAAALIFGLSPLNTESVVWVSGRTDLLC
CFFFLLSLNLIIAKNTFPQLLTAGAISICFLCSLLAKESSIALLGIVPFFLWSGQNSGMGSRRFLVLIAMGSALAAYLIL
RFGIDFSVDNGVAKVVEGGKTKSISMLLYESIVAMGFYFSKLLWPFPLNFAIVSINRPLSAVIAFAGIFSLSCLYLRVAI
TRLPILIMVMCIIPPIMAIHGKLAWTPYAERYLYLPMVGFAMFAGWAVTQLPKRLASFAVIALLLLAFPTLSRAVIWSNS
EVFWRETIEKSPEFPRSYVGYAAELIKLRRYDEAEQNLKRALDMKYETYFVWQNLATIYQERGDHSQYENAMLRAISLSK
TPTELYIKLIQNLLWHGTKSENSRKAYQKAANYYLLAYEKDKNFGEGLYNAAKLYLILGDQRKARCYFELFLAHPGDSLY
RPAARKMLDKIVTHDNLGGAAI
>Mature_582_residues
MNKKIKSINDLNRGATSGDDLLDWVSLVVVGIVVTLAYLPALTSGFLSLDDIALVKTFMTSEISLKSLFVGASGDYFRPI
TILSYFLDVKAGDADPLISHILNVGLHLFNTFLVFVLSRAYLNKVTDSRWPSLAAALIFGLSPLNTESVVWVSGRTDLLC
CFFFLLSLNLIIAKNTFPQLLTAGAISICFLCSLLAKESSIALLGIVPFFLWSGQNSGMGSRRFLVLIAMGSALAAYLIL
RFGIDFSVDNGVAKVVEGGKTKSISMLLYESIVAMGFYFSKLLWPFPLNFAIVSINRPLSAVIAFAGIFSLSCLYLRVAI
TRLPILIMVMCIIPPIMAIHGKLAWTPYAERYLYLPMVGFAMFAGWAVTQLPKRLASFAVIALLLLAFPTLSRAVIWSNS
EVFWRETIEKSPEFPRSYVGYAAELIKLRRYDEAEQNLKRALDMKYETYFVWQNLATIYQERGDHSQYENAMLRAISLSK
TPTELYIKLIQNLLWHGTKSENSRKAYQKAANYYLLAYEKDKNFGEGLYNAAKLYLILGDQRKARCYFELFLAHPGDSLY
RPAARKMLDKIVTHDNLGGAAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI24581187, Length=303, Percent_Identity=28.0528052805281, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI281364285, Length=303, Percent_Identity=28.0528052805281, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65025; Mature: 65025

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKIKSINDLNRGATSGDDLLDWVSLVVVGIVVTLAYLPALTSGFLSLDDIALVKTFMT
CCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
SEISLKSLFVGASGDYFRPITILSYFLDVKAGDADPLISHILNVGLHLFNTFLVFVLSRA
CCHHHHHEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YLNKVTDSRWPSLAAALIFGLSPLNTESVVWVSGRTDLLCCFFFLLSLNLIIAKNTFPQL
HHHHHCCCCCHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHEECCCHHHH
LTAGAISICFLCSLLAKESSIALLGIVPFFLWSGQNSGMGSRRFLVLIAMGSALAAYLIL
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHH
RFGIDFSVDNGVAKVVEGGKTKSISMLLYESIVAMGFYFSKLLWPFPLNFAIVSINRPLS
HHCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHH
AVIAFAGIFSLSCLYLRVAITRLPILIMVMCIIPPIMAIHGKLAWTPYAERYLYLPMVGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHEEHHHHHHH
AMFAGWAVTQLPKRLASFAVIALLLLAFPTLSRAVIWSNSEVFWRETIEKSPEFPRSYVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHCCCCCCHHHHH
YAAELIKLRRYDEAEQNLKRALDMKYETYFVWQNLATIYQERGDHSQYENAMLRAISLSK
HHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
TPTELYIKLIQNLLWHGTKSENSRKAYQKAANYYLLAYEKDKNFGEGLYNAAKLYLILGD
CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCEEEEEEECCCCCCHHHHHHEEEEEEECC
QRKARCYFELFLAHPGDSLYRPAARKMLDKIVTHDNLGGAAI
CCCHHEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNKKIKSINDLNRGATSGDDLLDWVSLVVVGIVVTLAYLPALTSGFLSLDDIALVKTFMT
CCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
SEISLKSLFVGASGDYFRPITILSYFLDVKAGDADPLISHILNVGLHLFNTFLVFVLSRA
CCHHHHHEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YLNKVTDSRWPSLAAALIFGLSPLNTESVVWVSGRTDLLCCFFFLLSLNLIIAKNTFPQL
HHHHHCCCCCHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHEECCCHHHH
LTAGAISICFLCSLLAKESSIALLGIVPFFLWSGQNSGMGSRRFLVLIAMGSALAAYLIL
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHH
RFGIDFSVDNGVAKVVEGGKTKSISMLLYESIVAMGFYFSKLLWPFPLNFAIVSINRPLS
HHCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHH
AVIAFAGIFSLSCLYLRVAITRLPILIMVMCIIPPIMAIHGKLAWTPYAERYLYLPMVGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHEEHHHHHHH
AMFAGWAVTQLPKRLASFAVIALLLLAFPTLSRAVIWSNSEVFWRETIEKSPEFPRSYVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHCCCCCCHHHHH
YAAELIKLRRYDEAEQNLKRALDMKYETYFVWQNLATIYQERGDHSQYENAMLRAISLSK
HHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
TPTELYIKLIQNLLWHGTKSENSRKAYQKAANYYLLAYEKDKNFGEGLYNAAKLYLILGD
CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCEEEEEEECCCCCCHHHHHHEEEEEEECC
QRKARCYFELFLAHPGDSLYRPAARKMLDKIVTHDNLGGAAI
CCCHHEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA