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The map label for this gene is korB [H]

Identifier: 39996569

GI number: 39996569

Start: 1611306

End: 1612127

Strand: Direct

Name: korB [H]

Synonym: GSU1469

Alternate gene names: 39996569

Gene position: 1611306-1612127 (Clockwise)

Preceding gene: 39996568

Following gene: 39996570

Centisome position: 42.25

GC content: 57.42

Gene sequence:

>822_bases
ATGGCTTTCAATTATGAGAAATACATCCGTCCGGGGAAACTGCCTCATATCTGGTGCCCCGGCTGTGGTCACGGCATCGT
CATGAAGGGTCTCATCAGGGCGATGGATACACTCGGTCTCGAGAAGAACAATACGGCGATCGTCTCCGGTATCGGTTGTG
CCTCCCGTCTTCCCGGATACATGGACTGCTGCACCCTCCACACCGCACACGGTCGCGCTGCTGCGTTCGCCACCGGCGTA
AAGCTGTCTAAGCCGGAAATGACAGTCTTCTGCGTCGGCGGTGATGGAGACGGCGTTGCTATCGGCGGCAACCACTTCAT
CCATGCCTGCCGTCGCAACATTGACATGACGTACATTTTGATGAACAACAAAATCTACGGCATGACCGGCGGGCAGTTCT
CGCCGGCTACCCCGCACATGGCGAAAGCTTCCACCACCCCCTATGGCAACCCCGACCCGTCTTTCGACATCGCCAAGCTT
GCCATTGGTGCCGGTGCAACCTTCGTGGCCCGTGGTACTGCGTTCCACGCCAACCAGATCGACAAGCTGATTGTCGAAGC
CGTACAGCACAAGGGGATGTCGGTTGTTGAAATCCTTGACGACTGCCCCACCTGCTTCGGCCGTCGGAACAAGTACCGGT
CGGTTGTCGAGATGATGAACCATCTCAAGGAAGTTGCCGTACCGGTCAAGGCCGCTGAGAAGATGACGCCCGAGCAGCTT
CAGGGCAAGGTTCTCACGGGCGTTCTGTACAAGGAAGACAAACCCGAGTACTGCGAAGAGTATCGGAAAGTCATCGAGCG
CGCCCAGGGCGGTGCCAAGTAA

Upstream 100 bases:

>100_bases
GCATCGAAGGCAACGCTCCTGTCCTCGGTATTTATCACGTGGATGGCGAACCGGTAAATCCCGGCGAAATCCTCAGCAAG
ATTAAGGAGGTCAAGTAATA

Downstream 100 bases:

>100_bases
ACCGAGCATAAAAGGAGATAGATACATGTCTGGAAGATATGAAATCAGGTTTTCCGGTGCCGGCGGCCAAGGGCTCATTC
TTGCCGGGGTGATTATGGCC

Product: 2-oxoglutarate ferredoxin oxidoreductase subunit beta

Products: NA

Alternate protein names: 2-ketoglutarate oxidoreductase beta chain; KOR; 2-oxoglutarate-ferredoxin oxidoreductase subunit beta [H]

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MAFNYEKYIRPGKLPHIWCPGCGHGIVMKGLIRAMDTLGLEKNNTAIVSGIGCASRLPGYMDCCTLHTAHGRAAAFATGV
KLSKPEMTVFCVGGDGDGVAIGGNHFIHACRRNIDMTYILMNNKIYGMTGGQFSPATPHMAKASTTPYGNPDPSFDIAKL
AIGAGATFVARGTAFHANQIDKLIVEAVQHKGMSVVEILDDCPTCFGRRNKYRSVVEMMNHLKEVAVPVKAAEKMTPEQL
QGKVLTGVLYKEDKPEYCEEYRKVIERAQGGAK

Sequences:

>Translated_273_residues
MAFNYEKYIRPGKLPHIWCPGCGHGIVMKGLIRAMDTLGLEKNNTAIVSGIGCASRLPGYMDCCTLHTAHGRAAAFATGV
KLSKPEMTVFCVGGDGDGVAIGGNHFIHACRRNIDMTYILMNNKIYGMTGGQFSPATPHMAKASTTPYGNPDPSFDIAKL
AIGAGATFVARGTAFHANQIDKLIVEAVQHKGMSVVEILDDCPTCFGRRNKYRSVVEMMNHLKEVAVPVKAAEKMTPEQL
QGKVLTGVLYKEDKPEYCEEYRKVIERAQGGAK
>Mature_272_residues
AFNYEKYIRPGKLPHIWCPGCGHGIVMKGLIRAMDTLGLEKNNTAIVSGIGCASRLPGYMDCCTLHTAHGRAAAFATGVK
LSKPEMTVFCVGGDGDGVAIGGNHFIHACRRNIDMTYILMNNKIYGMTGGQFSPATPHMAKASTTPYGNPDPSFDIAKLA
IGAGATFVARGTAFHANQIDKLIVEAVQHKGMSVVEILDDCPTCFGRRNKYRSVVEMMNHLKEVAVPVKAAEKMTPEQLQ
GKVLTGVLYKEDKPEYCEEYRKVIERAQGGAK

Specific function: Unknown

COG id: COG1013

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011766 [H]

Pfam domain/function: PF02775 TPP_enzyme_C [H]

EC number: =1.2.7.3 [H]

Molecular weight: Translated: 29614; Mature: 29483

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFNYEKYIRPGKLPHIWCPGCGHGIVMKGLIRAMDTLGLEKNNTAIVSGIGCASRLPGY
CCCCCHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHCCCH
MDCCTLHTAHGRAAAFATGVKLSKPEMTVFCVGGDGDGVAIGGNHFIHACRRNIDMTYIL
HHHHHEECCCCCHHHHHCCCEECCCCEEEEEECCCCCEEEECCHHHHHHHHCCCCEEEEE
MNNKIYGMTGGQFSPATPHMAKASTTPYGNPDPSFDIAKLAIGAGATFVARGTAFHANQI
ECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCEECHHHH
DKLIVEAVQHKGMSVVEILDDCPTCFGRRNKYRSVVEMMNHLKEVAVPVKAAEKMTPEQL
HHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
QGKVLTGVLYKEDKPEYCEEYRKVIERAQGGAK
CCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AFNYEKYIRPGKLPHIWCPGCGHGIVMKGLIRAMDTLGLEKNNTAIVSGIGCASRLPGY
CCCCHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHCCCH
MDCCTLHTAHGRAAAFATGVKLSKPEMTVFCVGGDGDGVAIGGNHFIHACRRNIDMTYIL
HHHHHEECCCCCHHHHHCCCEECCCCEEEEEECCCCCEEEECCHHHHHHHHCCCCEEEEE
MNNKIYGMTGGQFSPATPHMAKASTTPYGNPDPSFDIAKLAIGAGATFVARGTAFHANQI
ECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCEECHHHH
DKLIVEAVQHKGMSVVEILDDCPTCFGRRNKYRSVVEMMNHLKEVAVPVKAAEKMTPEQL
HHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
QGKVLTGVLYKEDKPEYCEEYRKVIERAQGGAK
CCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]