Click here to switch to the map view.

The map label for this gene is 39996531

Identifier: 39996531

GI number: 39996531

Start: 1567785

End: 1569368

Strand: Reverse

Name: 39996531

Synonym: GSU1431

Alternate gene names: NA

Gene position: 1569368-1567785 (Counterclockwise)

Preceding gene: 39996539

Following gene: 39996530

Centisome position: 41.15

GC content: 61.43

Gene sequence:

>1584_bases
ATGGAACAACACCACGTTCGGTCACTGCTGAAGCCTTCCGCCTACCCGGATCCGACCGGCTCCGTGGAGTTGGTCCAGAC
CCACGTCTCCTACATCTTTCTCACCGACAACTTCGCCTACAAGGTAAAAAAACCCGTAGACTTCGGCTTCCTCAACTTTT
CAACCCCGGATCGGCGCCGTTTCTACTGCGAAGAGGAGGTTCGCCTCAACCGCAGGCTCTGCCCTGACATCTATCTCGGC
GTGGCAGAGGTGCGTGATACTCCGGCCGGAGCCGCGTTCGTCGGCGAAGGACAGGTCATCGATCACGCGGTCAAAATGAA
GCGGCTGCCGGCGGACCGCATGCTCGACCGGCTGCTTTCGGCCGGCCTGGCCGGAGAGCCGGAGATCCGGGCTGTGGCGC
GCGTTGTCGGCACCTTTCACCTGGAGGCGGAACACAGCTCTGAAATAGATGCGTTCGGCGACCTCGCCACTATCAATGCC
AACTGGGTGGAGAACTTCCAGCAGACTCGCCCTTACTGCGGCATCACTCTGAGCGCGGGGGATCACGACTTCATCAGAGG
ATGGGTCGAACGATTCATGGCGGAGCGGGTCGACCTCTTTGCCGCGCGGGTCGGGGACGGCCGCATCCGCGACGGCAACG
GCGATATTCACATGGAAAATATCTGCCTCGGCGCCGACGGCCGCGTCTGCATTTTCGACTGCATCGAGTTCAACAATCGG
TTCCGCTACGGCGACACTGCGGCAGACATCGCCTTCCTGCTCATGGATTTCGACTTCGTCCTCCGACCTGATCTGGGAGC
CGCTTTCCTGGACGAGTACACGCGGATCACCAACGATGCGAGCGTCGTTGAAATGATCGACTTCTACAAGGTGTATCGGG
CCTTTGTCCGGGGTAAAGTGGAGAGCATGCGGCTCTCTGATCCGCAGATACCGGAAAACGAAAAACAGGCAGCCGCGGCA
CGGGCATCCCGGTACTTTCGCCTGGCACGGGGCTATGCGGTGAGGCAGGGACTTCCGCCAACCCTTTTCATTACCTGCGG
ACTAACCGGCACAGGAAAAAGCCGTCTGTCACGGGAGCTCTCCCTGGACCTGGGGCTGGAAATCGCCTCCTCCGATGTGG
TAAGAAAGGAGCTTGCGGGACTACGCTCCACGGAGCGGCCGGACCAAGATTACGGCGCAGGGATTTATACGGACCGATTC
TCGCTGCTGACATACGGGGAACTGGAACGCCGGGCGCGGGTAGCCCTGGAGGGCGGCCGCAGCATCGTTGTGGATGCCAC
CTTCCGCCGGCGCGCCGACCGGGAACGGTTCGGGGCTTTGGCACGGGACGCCGGCGCGACGTTCGTCATCCTGCATGCGG
TCTGCCCCGAGCCGACAATCCGCAGCCGGCTCAACTCGCGACAGAAAGACAGGAGCGAGCCCTCGGACGGGACTTGGGAG
GTCTACCTCCGGCAAAAAGACGAATTCGATCCCCCCTCGGACCAGGAGGGAAACCTCCTGTGCATCGACACGTCGGACAC
CGCGTCAGCCATGGTTGACAAGGTGCTCCACGGACTGGAGCTGCTGCCATGTGGAAAAAGCTGA

Upstream 100 bases:

>100_bases
ATTAACCCCACACCGTCAAATGTTTCTCTGGGCTCCGGAACCTTGCACCGACCGGGGTTTGTGGTACTGTTGACATAACT
TTTCTTCCCATGGAAGCGGT

Downstream 100 bases:

>100_bases
ACGGCGCCATCCTCAAGCGGTTGCGACTCAGGGAATCATGGGTGATCTTCTTTGTGCTGGGGATCATCATGATGAATTAC
CCCTTCACCCAGATATTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 527; Mature: 527

Protein sequence:

>527_residues
MEQHHVRSLLKPSAYPDPTGSVELVQTHVSYIFLTDNFAYKVKKPVDFGFLNFSTPDRRRFYCEEEVRLNRRLCPDIYLG
VAEVRDTPAGAAFVGEGQVIDHAVKMKRLPADRMLDRLLSAGLAGEPEIRAVARVVGTFHLEAEHSSEIDAFGDLATINA
NWVENFQQTRPYCGITLSAGDHDFIRGWVERFMAERVDLFAARVGDGRIRDGNGDIHMENICLGADGRVCIFDCIEFNNR
FRYGDTAADIAFLLMDFDFVLRPDLGAAFLDEYTRITNDASVVEMIDFYKVYRAFVRGKVESMRLSDPQIPENEKQAAAA
RASRYFRLARGYAVRQGLPPTLFITCGLTGTGKSRLSRELSLDLGLEIASSDVVRKELAGLRSTERPDQDYGAGIYTDRF
SLLTYGELERRARVALEGGRSIVVDATFRRRADRERFGALARDAGATFVILHAVCPEPTIRSRLNSRQKDRSEPSDGTWE
VYLRQKDEFDPPSDQEGNLLCIDTSDTASAMVDKVLHGLELLPCGKS

Sequences:

>Translated_527_residues
MEQHHVRSLLKPSAYPDPTGSVELVQTHVSYIFLTDNFAYKVKKPVDFGFLNFSTPDRRRFYCEEEVRLNRRLCPDIYLG
VAEVRDTPAGAAFVGEGQVIDHAVKMKRLPADRMLDRLLSAGLAGEPEIRAVARVVGTFHLEAEHSSEIDAFGDLATINA
NWVENFQQTRPYCGITLSAGDHDFIRGWVERFMAERVDLFAARVGDGRIRDGNGDIHMENICLGADGRVCIFDCIEFNNR
FRYGDTAADIAFLLMDFDFVLRPDLGAAFLDEYTRITNDASVVEMIDFYKVYRAFVRGKVESMRLSDPQIPENEKQAAAA
RASRYFRLARGYAVRQGLPPTLFITCGLTGTGKSRLSRELSLDLGLEIASSDVVRKELAGLRSTERPDQDYGAGIYTDRF
SLLTYGELERRARVALEGGRSIVVDATFRRRADRERFGALARDAGATFVILHAVCPEPTIRSRLNSRQKDRSEPSDGTWE
VYLRQKDEFDPPSDQEGNLLCIDTSDTASAMVDKVLHGLELLPCGKS
>Mature_527_residues
MEQHHVRSLLKPSAYPDPTGSVELVQTHVSYIFLTDNFAYKVKKPVDFGFLNFSTPDRRRFYCEEEVRLNRRLCPDIYLG
VAEVRDTPAGAAFVGEGQVIDHAVKMKRLPADRMLDRLLSAGLAGEPEIRAVARVVGTFHLEAEHSSEIDAFGDLATINA
NWVENFQQTRPYCGITLSAGDHDFIRGWVERFMAERVDLFAARVGDGRIRDGNGDIHMENICLGADGRVCIFDCIEFNNR
FRYGDTAADIAFLLMDFDFVLRPDLGAAFLDEYTRITNDASVVEMIDFYKVYRAFVRGKVESMRLSDPQIPENEKQAAAA
RASRYFRLARGYAVRQGLPPTLFITCGLTGTGKSRLSRELSLDLGLEIASSDVVRKELAGLRSTERPDQDYGAGIYTDRF
SLLTYGELERRARVALEGGRSIVVDATFRRRADRERFGALARDAGATFVILHAVCPEPTIRSRLNSRQKDRSEPSDGTWE
VYLRQKDEFDPPSDQEGNLLCIDTSDTASAMVDKVLHGLELLPCGKS

Specific function: Some isolated peptides of this protein are able to bind to human U937 monocytoblastic and A549 epithelial cell lines [H]

COG id: COG2187

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted, cell wall [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011009
- InterPro:   IPR010488 [H]

Pfam domain/function: PF06414 Zeta_toxin [H]

EC number: NA

Molecular weight: Translated: 59127; Mature: 59127

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQHHVRSLLKPSAYPDPTGSVELVQTHVSYIFLTDNFAYKVKKPVDFGFLNFSTPDRRR
CCHHHHHHHHCCCCCCCCCCCHHHEEEEEEEEEEECCCEEEECCCCCEEEEECCCCCHHH
FYCEEEVRLNRRLCPDIYLGVAEVRDTPAGAAFVGEGQVIDHAVKMKRLPADRMLDRLLS
EEECHHHHHHHHCCCHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHHH
AGLAGEPEIRAVARVVGTFHLEAEHSSEIDAFGDLATINANWVENFQQTRPYCGITLSAG
CCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEEHHHHHHHHHCCCCEEEEECCC
DHDFIRGWVERFMAERVDLFAARVGDGRIRDGNGDIHMENICLGADGRVCIFDCIEFNNR
CHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEEEECCCCCEEEEEEEECCCC
FRYGDTAADIAFLLMDFDFVLRPDLGAAFLDEYTRITNDASVVEMIDFYKVYRAFVRGKV
CCCCCHHHHHHHHHHCCHHEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCH
ESMRLSDPQIPENEKQAAAARASRYFRLARGYAVRQGLPPTLFITCGLTGTGKSRLSREL
HHEECCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHCCCCCEEEEEECCCCCCHHHHHHHH
SLDLGLEIASSDVVRKELAGLRSTERPDQDYGAGIYTDRFSLLTYGELERRARVALEGGR
HHCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCEEEHHHHHHHHHHHCCCCC
SIVVDATFRRRADRERFGALARDAGATFVILHAVCPEPTIRSRLNSRQKDRSEPSDGTWE
EEEEECHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEE
VYLRQKDEFDPPSDQEGNLLCIDTSDTASAMVDKVLHGLELLPCGKS
EEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCEECCCCCC
>Mature Secondary Structure
MEQHHVRSLLKPSAYPDPTGSVELVQTHVSYIFLTDNFAYKVKKPVDFGFLNFSTPDRRR
CCHHHHHHHHCCCCCCCCCCCHHHEEEEEEEEEEECCCEEEECCCCCEEEEECCCCCHHH
FYCEEEVRLNRRLCPDIYLGVAEVRDTPAGAAFVGEGQVIDHAVKMKRLPADRMLDRLLS
EEECHHHHHHHHCCCHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHHH
AGLAGEPEIRAVARVVGTFHLEAEHSSEIDAFGDLATINANWVENFQQTRPYCGITLSAG
CCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEEHHHHHHHHHCCCCEEEEECCC
DHDFIRGWVERFMAERVDLFAARVGDGRIRDGNGDIHMENICLGADGRVCIFDCIEFNNR
CHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEEEECCCCCEEEEEEEECCCC
FRYGDTAADIAFLLMDFDFVLRPDLGAAFLDEYTRITNDASVVEMIDFYKVYRAFVRGKV
CCCCCHHHHHHHHHHCCHHEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCH
ESMRLSDPQIPENEKQAAAARASRYFRLARGYAVRQGLPPTLFITCGLTGTGKSRLSREL
HHEECCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHCCCCCEEEEEECCCCCCHHHHHHHH
SLDLGLEIASSDVVRKELAGLRSTERPDQDYGAGIYTDRFSLLTYGELERRARVALEGGR
HHCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCEEEHHHHHHHHHHHCCCCC
SIVVDATFRRRADRERFGALARDAGATFVILHAVCPEPTIRSRLNSRQKDRSEPSDGTWE
EEEEECHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEE
VYLRQKDEFDPPSDQEGNLLCIDTSDTASAMVDKVLHGLELLPCGKS
EEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]