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The map label for this gene is hylB [C]

Identifier: 39996476

GI number: 39996476

Start: 1501915

End: 1503540

Strand: Reverse

Name: hylB [C]

Synonym: GSU1374

Alternate gene names: 39996476

Gene position: 1503540-1501915 (Counterclockwise)

Preceding gene: 39996478

Following gene: 39996474

Centisome position: 39.42

GC content: 63.9

Gene sequence:

>1626_bases
ATGATGCTGCAGAACCTGAAAATCGGCACCAGACTGTACGGATTGATCGGCTTCATGTCGATCCTGTTGATCGTTATCGG
CGCACTGGGGCTCAACACCGCGAGAACAGCCAACAACGGTCTGGACACGGTGTACAGGGACCGCGTGCTCCCCCTGAAGG
ATCTGAAAATCATTGCAGATATGTACGCGGTGAACATCGTGGACGTGTCCCACAAGGTGCGCAACGGCAATATCACCTGG
ACCGAGGGACGCAAGAGCGTCGAAGAGGCGAAAAAGACCATTGCGGAGAAGTTGCAGGCGTATCTGGCCACCAATCTGGC
GGAAGAGGAGAAAAAACACCTCGAAGAGGCCAAGCCGCTGATCAAGGTCGCCGATGCCACGCTGGAGCGGCTGGCATCGA
TTCTGAGCGCCGAAGATGCCGAAGCCCTCACCGCTTTCACGGTTTCCGAGCTCTACCCGGCCATCGATCCGGTGTCGGCT
AAGTTCAGCAGCCTGGTGGACGACCAGTTGAAGATCGCCAAGCAAGAATACGACCACAGCTCCGGATTGTACCGGGCAAG
CCGGACCATCTCCTTGGTGGCGATCATCGTGGGAGTACTGATCGCCGGCACCGCCGGCCTGCTCATTACCCGCTCCATTA
CCGGCCCCCTGGCCGAAGGGGTCGAGGTGGCCAACCGGCTTGCCGCCGGCGACCTGACCGTGGAGGTCCGGGCTGGCGGC
AGGGACGAGACCGGCCAGCTCATGGCCGCCATGGGGAACATGGTGACCAGCCTGCGCCACCTGATCGCCGAGGCAATCAG
CATCTCCCACGGCATTGCCTCCGCCTCCAACCAGCTCCACGCCACCTCCGAGCAGATCGCCACCGGTTCGGAGGAGGTTG
CCAGCCAGGTGGGTGCCGTGGCCACGGCCAGCGAGGAGATGTCGTCCACCAGCCGGGACATCGCCCAGAACTGTACCCTG
GCCGCGGAAAGCTCCCGCGAAACCAGCGTCACCGCGTCCAACGGTTCCGCCGTCGTTCAGGAAACCAACAGCGGGATGGT
GGTCATTGCCGAGCGGGTCAAGCAGACCGCCGGCACCGTGGATGCCCTGGGCCGCCGCTCCGAGCAGATCGGGGAGATCA
TCGGCACCATCGAGGACATCGCCGACCAGACCAACCTGCTGGCCCTCAACGCCGCCATCGAGGCGGCCCGCGCCGGCGAG
CAGGGACGCGGCTTCGCCGTGGTGGCCGACGAGGTACGGGCCCTGGCCGAACGCACCACCAAGGCCACCAAAGAGATCAG
CGGCATGATCAAGGCCATTCAGAACGAGACCAAGGCCGCCGTCCAGGCCATGGAAGAAGGGGTCGGCGAGGTTGAAAAGG
GTTCCGTCACCTCCCACAAGTCGGGCCAGGCCCTGGCCGAGATCCTGGACCGGATCAACGACGTGACCATGCAGATAAAC
CAGATCGCCACCGCCGCCGAAGAGCAGACCGCCACCACCGGCGAGATCACCTCCAACATCCAGCAGATCTCCGACGTGGT
CCAGCAGACCGCCCGGGGCGCCGAGGAGGTCTCCGCCGCCGCGGCCCAGCTGGCCCAGCAGGCCCATCAGCTCCAGAACG
TGGTGGGGAACTTCAGGATCGCATGA

Upstream 100 bases:

>100_bases
TATGAATACATCCCGTTTACGGAAATTTGTTGCAAAGTCCTCAAGTAAACGCTGTTTGACGCCGAAGAACAAAAGGACTC
AACTCTGAAGGAGGTAACGG

Downstream 100 bases:

>100_bases
TCGCAACGGCCCGGCGGATGCGGCGGCACTCCCGCTCCGCATCCGCCGGCCTGCCTCCCGCAGCCGTCCCGGGCGGACAA
CCGCCCCCCTGCCCCGCCAC

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 541; Mature: 541

Protein sequence:

>541_residues
MMLQNLKIGTRLYGLIGFMSILLIVIGALGLNTARTANNGLDTVYRDRVLPLKDLKIIADMYAVNIVDVSHKVRNGNITW
TEGRKSVEEAKKTIAEKLQAYLATNLAEEEKKHLEEAKPLIKVADATLERLASILSAEDAEALTAFTVSELYPAIDPVSA
KFSSLVDDQLKIAKQEYDHSSGLYRASRTISLVAIIVGVLIAGTAGLLITRSITGPLAEGVEVANRLAAGDLTVEVRAGG
RDETGQLMAAMGNMVTSLRHLIAEAISISHGIASASNQLHATSEQIATGSEEVASQVGAVATASEEMSSTSRDIAQNCTL
AAESSRETSVTASNGSAVVQETNSGMVVIAERVKQTAGTVDALGRRSEQIGEIIGTIEDIADQTNLLALNAAIEAARAGE
QGRGFAVVADEVRALAERTTKATKEISGMIKAIQNETKAAVQAMEEGVGEVEKGSVTSHKSGQALAEILDRINDVTMQIN
QIATAAEEQTATTGEITSNIQQISDVVQQTARGAEEVSAAAAQLAQQAHQLQNVVGNFRIA

Sequences:

>Translated_541_residues
MMLQNLKIGTRLYGLIGFMSILLIVIGALGLNTARTANNGLDTVYRDRVLPLKDLKIIADMYAVNIVDVSHKVRNGNITW
TEGRKSVEEAKKTIAEKLQAYLATNLAEEEKKHLEEAKPLIKVADATLERLASILSAEDAEALTAFTVSELYPAIDPVSA
KFSSLVDDQLKIAKQEYDHSSGLYRASRTISLVAIIVGVLIAGTAGLLITRSITGPLAEGVEVANRLAAGDLTVEVRAGG
RDETGQLMAAMGNMVTSLRHLIAEAISISHGIASASNQLHATSEQIATGSEEVASQVGAVATASEEMSSTSRDIAQNCTL
AAESSRETSVTASNGSAVVQETNSGMVVIAERVKQTAGTVDALGRRSEQIGEIIGTIEDIADQTNLLALNAAIEAARAGE
QGRGFAVVADEVRALAERTTKATKEISGMIKAIQNETKAAVQAMEEGVGEVEKGSVTSHKSGQALAEILDRINDVTMQIN
QIATAAEEQTATTGEITSNIQQISDVVQQTARGAEEVSAAAAQLAQQAHQLQNVVGNFRIA
>Mature_541_residues
MMLQNLKIGTRLYGLIGFMSILLIVIGALGLNTARTANNGLDTVYRDRVLPLKDLKIIADMYAVNIVDVSHKVRNGNITW
TEGRKSVEEAKKTIAEKLQAYLATNLAEEEKKHLEEAKPLIKVADATLERLASILSAEDAEALTAFTVSELYPAIDPVSA
KFSSLVDDQLKIAKQEYDHSSGLYRASRTISLVAIIVGVLIAGTAGLLITRSITGPLAEGVEVANRLAAGDLTVEVRAGG
RDETGQLMAAMGNMVTSLRHLIAEAISISHGIASASNQLHATSEQIATGSEEVASQVGAVATASEEMSSTSRDIAQNCTL
AAESSRETSVTASNGSAVVQETNSGMVVIAERVKQTAGTVDALGRRSEQIGEIIGTIEDIADQTNLLALNAAIEAARAGE
QGRGFAVVADEVRALAERTTKATKEISGMIKAIQNETKAAVQAMEEGVGEVEKGSVTSHKSGQALAEILDRINDVTMQIN
QIATAAEEQTATTGEITSNIQQISDVVQQTARGAEEVSAAAAQLAQQAHQLQNVVGNFRIA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=390, Percent_Identity=31.2820512820513, Blast_Score=158, Evalue=8e-40,
Organism=Escherichia coli, GI1788194, Length=364, Percent_Identity=32.4175824175824, Blast_Score=146, Evalue=3e-36,
Organism=Escherichia coli, GI2367378, Length=351, Percent_Identity=34.7578347578348, Blast_Score=144, Evalue=2e-35,
Organism=Escherichia coli, GI1788195, Length=333, Percent_Identity=33.6336336336336, Blast_Score=134, Evalue=2e-32,
Organism=Escherichia coli, GI1789453, Length=349, Percent_Identity=30.3724928366762, Blast_Score=118, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 57094; Mature: 57094

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS50885 HAMP ; PS00216 SUGAR_TRANSPORT_1 ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLQNLKIGTRLYGLIGFMSILLIVIGALGLNTARTANNGLDTVYRDRVLPLKDLKIIAD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHCCCCCHHHHHHHHH
MYAVNIVDVSHKVRNGNITWTEGRKSVEEAKKTIAEKLQAYLATNLAEEEKKHLEEAKPL
HHHHHHEEHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKVADATLERLASILSAEDAEALTAFTVSELYPAIDPVSAKFSSLVDDQLKIAKQEYDHS
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC
SGLYRASRTISLVAIIVGVLIAGTAGLLITRSITGPLAEGVEVANRLAAGDLTVEVRAGG
CCHHHHHHHHHHHHHHHHHHHHCCHHHHEEECCCCHHHHHHHHHHHHHCCCEEEEEECCC
RDETGQLMAAMGNMVTSLRHLIAEAISISHGIASASNQLHATSEQIATGSEEVASQVGAV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHH
ATASEEMSSTSRDIAQNCTLAAESSRETSVTASNGSAVVQETNSGMVVIAERVKQTAGTV
HHHHHHHHHHHHHHHHHCCEEECCCCCCEEEECCCCEEEEECCCCEEEEHHHHHHHHCHH
DALGRRSEQIGEIIGTIEDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAERTT
HHHHCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHH
KATKEISGMIKAIQNETKAAVQAMEEGVGEVEKGSVTSHKSGQALAEILDRINDVTMQIN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
QIATAAEEQTATTGEITSNIQQISDVVQQTARGAEEVSAAAAQLAQQAHQLQNVVGNFRI
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
A
C
>Mature Secondary Structure
MMLQNLKIGTRLYGLIGFMSILLIVIGALGLNTARTANNGLDTVYRDRVLPLKDLKIIAD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHCCCCCHHHHHHHHH
MYAVNIVDVSHKVRNGNITWTEGRKSVEEAKKTIAEKLQAYLATNLAEEEKKHLEEAKPL
HHHHHHEEHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKVADATLERLASILSAEDAEALTAFTVSELYPAIDPVSAKFSSLVDDQLKIAKQEYDHS
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC
SGLYRASRTISLVAIIVGVLIAGTAGLLITRSITGPLAEGVEVANRLAAGDLTVEVRAGG
CCHHHHHHHHHHHHHHHHHHHHCCHHHHEEECCCCHHHHHHHHHHHHHCCCEEEEEECCC
RDETGQLMAAMGNMVTSLRHLIAEAISISHGIASASNQLHATSEQIATGSEEVASQVGAV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHH
ATASEEMSSTSRDIAQNCTLAAESSRETSVTASNGSAVVQETNSGMVVIAERVKQTAGTV
HHHHHHHHHHHHHHHHHCCEEECCCCCCEEEECCCCEEEEECCCCEEEEHHHHHHHHCHH
DALGRRSEQIGEIIGTIEDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAERTT
HHHHCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHH
KATKEISGMIKAIQNETKAAVQAMEEGVGEVEKGSVTSHKSGQALAEILDRINDVTMQIN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
QIATAAEEQTATTGEITSNIQQISDVVQQTARGAEEVSAAAAQLAQQAHQLQNVVGNFRI
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA