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The map label for this gene is 39996470

Identifier: 39996470

GI number: 39996470

Start: 1496621

End: 1497493

Strand: Direct

Name: 39996470

Synonym: GSU1368

Alternate gene names: NA

Gene position: 1496621-1497493 (Clockwise)

Preceding gene: 39996469

Following gene: 39996471

Centisome position: 39.24

GC content: 58.65

Gene sequence:

>873_bases
ATGCACGAGGCCGTGGCCCGCATGCTTGCCAAATACGAACCAAAGAGCGTTGACGACTCGGTCAGGGCTCTGCGGGAGAT
TATCCAGGAGGTGGCGCTGCTCGGACTCTGGCGGTCGAAGTTTTTCGAGCATGCCGCGTTTTACGGCGGCACTGCTCTGC
GTATCCTGTACGGACTCGACCGGTTCTCCGAGAATCTGGATTTTTCGCTGCTGGAACCGTCGCCTGATTTCAATCTTGCG
CGTTATACGGCATCACTTGAGGAGGAATTGTCGGCCTTCGGCTTCAACGTCCGGGTGGAGATGGTCGGCAAGGCCGTGGA
ATCGGCGGTTCAGTCTGCGTTTCTCAAAGCCAACACCCGTAACGAACTCCTGGTCATCGAGACCGGTGGAGAGCTTGCCG
GTCAGGTTGCCGCCGGCCAGGTGCTGAAGGTGAAGATCGAGGTGGATACGGACCCGCCGACCGGGTTTACCACCTCGACC
CGTTATCTGCTGCAACCGATACCCTTTGCCGTTCGGAGCTATTCGCTCCCGGACCTGTTTGCCGGCAAGATGCATGCGCT
CCTCTTCCGCAGGTGGAAAAACCGGGTCAAGGGGCGCGACTGGTATGATTTCGTCTGGTATGCTGCCAACCATCCGCAGC
TTAATCTTGCCCACCTCGAGCAGCGGATGCGCCAGACCGGCCATTGGAGCGGGGATCTGCCACTTTCTGCTGCCGCGTTC
AGAGAGTTGCTGTCCGATAGCATCGACCGGCTTGATGTCGATCAGGCACGCAACGACGTGGCACCGTTCGTCAAGGATCA
ACAGGCGCTCGCTCTCTGGTCCCATGACTTTTTCCGGGATGTTGCGAGACGCGTTCAGACTGATGAAGGATGA

Upstream 100 bases:

>100_bases
ATCCGGTCCGTGTTGCGGAGATCGCCCGTGCGTACCGCTCCCGCAGAGTAAAACTATTGGCCGATCTGATCAGCCGCCTG
CACAGAAGAGGGGGACGATG

Downstream 100 bases:

>100_bases
ACTCGGCAATCTCAAGGAGTGAAGGACATACCCGGCGAATCAAGACCGAACGCAACGGTTGCTGACGCCGGGAGAAGTAT
CTGGTCGAGTATCGCAGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MHEAVARMLAKYEPKSVDDSVRALREIIQEVALLGLWRSKFFEHAAFYGGTALRILYGLDRFSENLDFSLLEPSPDFNLA
RYTASLEEELSAFGFNVRVEMVGKAVESAVQSAFLKANTRNELLVIETGGELAGQVAAGQVLKVKIEVDTDPPTGFTTST
RYLLQPIPFAVRSYSLPDLFAGKMHALLFRRWKNRVKGRDWYDFVWYAANHPQLNLAHLEQRMRQTGHWSGDLPLSAAAF
RELLSDSIDRLDVDQARNDVAPFVKDQQALALWSHDFFRDVARRVQTDEG

Sequences:

>Translated_290_residues
MHEAVARMLAKYEPKSVDDSVRALREIIQEVALLGLWRSKFFEHAAFYGGTALRILYGLDRFSENLDFSLLEPSPDFNLA
RYTASLEEELSAFGFNVRVEMVGKAVESAVQSAFLKANTRNELLVIETGGELAGQVAAGQVLKVKIEVDTDPPTGFTTST
RYLLQPIPFAVRSYSLPDLFAGKMHALLFRRWKNRVKGRDWYDFVWYAANHPQLNLAHLEQRMRQTGHWSGDLPLSAAAF
RELLSDSIDRLDVDQARNDVAPFVKDQQALALWSHDFFRDVARRVQTDEG
>Mature_290_residues
MHEAVARMLAKYEPKSVDDSVRALREIIQEVALLGLWRSKFFEHAAFYGGTALRILYGLDRFSENLDFSLLEPSPDFNLA
RYTASLEEELSAFGFNVRVEMVGKAVESAVQSAFLKANTRNELLVIETGGELAGQVAAGQVLKVKIEVDTDPPTGFTTST
RYLLQPIPFAVRSYSLPDLFAGKMHALLFRRWKNRVKGRDWYDFVWYAANHPQLNLAHLEQRMRQTGHWSGDLPLSAAAF
RELLSDSIDRLDVDQARNDVAPFVKDQQALALWSHDFFRDVARRVQTDEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32897; Mature: 32897

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: PS00287 CYSTATIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHEAVARMLAKYEPKSVDDSVRALREIIQEVALLGLWRSKFFEHAAFYGGTALRILYGLD
CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
RFSENLDFSLLEPSPDFNLARYTASLEEELSAFGFNVRVEMVGKAVESAVQSAFLKANTR
HHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC
NELLVIETGGELAGQVAAGQVLKVKIEVDTDPPTGFTTSTRYLLQPIPFAVRSYSLPDLF
CCEEEEECCCHHHHHHCCCEEEEEEEEECCCCCCCCCCCHHHHHHCCCHHHHCCCCCHHH
AGKMHALLFRRWKNRVKGRDWYDFVWYAANHPQLNLAHLEQRMRQTGHWSGDLPLSAAAF
HHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEHHHHHHHHHHCCCCCCCCCCCHHHH
RELLSDSIDRLDVDQARNDVAPFVKDQQALALWSHDFFRDVARRVQTDEG
HHHHHHHHHHCCHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MHEAVARMLAKYEPKSVDDSVRALREIIQEVALLGLWRSKFFEHAAFYGGTALRILYGLD
CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
RFSENLDFSLLEPSPDFNLARYTASLEEELSAFGFNVRVEMVGKAVESAVQSAFLKANTR
HHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC
NELLVIETGGELAGQVAAGQVLKVKIEVDTDPPTGFTTSTRYLLQPIPFAVRSYSLPDLF
CCEEEEECCCHHHHHHCCCEEEEEEEEECCCCCCCCCCCHHHHHHCCCHHHHCCCCCHHH
AGKMHALLFRRWKNRVKGRDWYDFVWYAANHPQLNLAHLEQRMRQTGHWSGDLPLSAAAF
HHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEHHHHHHHHHHCCCCCCCCCCCHHHH
RELLSDSIDRLDVDQARNDVAPFVKDQQALALWSHDFFRDVARRVQTDEG
HHHHHHHHHHCCHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA