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The map label for this gene is ytcJ [H]

Identifier: 39996446

GI number: 39996446

Start: 1470445

End: 1472256

Strand: Direct

Name: ytcJ [H]

Synonym: GSU1344

Alternate gene names: 39996446

Gene position: 1470445-1472256 (Clockwise)

Preceding gene: 39996445

Following gene: 39996447

Centisome position: 38.55

GC content: 66.67

Gene sequence:

>1812_bases
ATGCGAGCACCTGACCTGATTCTGCATAACGGATCCATCACGACCCTCGATCCGTCCCTGCCGCAGGTGTCCGCAGTAGC
CATTACTGACGGACGGATTACCGCGGCAGGCGGCGAGGAACTCCTGGCCTCCGCGGGCCGGGACACGGTACGGATCGACC
TGAAGGGGCGCCGGGCCATTCCCGGCCTCAACGACTCCCACATCCACGTGATCCGCGGAGGCCTCAACTTCACCATGGAA
CTGCGCTGGGACGGCGTTCCGTCCCTGGCCCTGGCCCTGGAGATGCTCAGGGAGCAGGCCCGGAGAACCCCGCCGCCCCA
GTGGGTGCGCGTGATCGGCGGCTGGACCGAGTTCCAGTTCGTGGAGCGCCGGATGCCGACGCTCGACGAGATCAACAGGG
TATCGCCCGATACGCCGGTGTTCGTGCTGCATCTCTATGATCGCGCCCTGGTCAACGGGGCCGGCCTGAGAGCGCTCGGC
TACACGAAAGACACCCCTGACCCGCCGGGAGGAGAGATCCAGCGGGACAGGGCGGGCAACCCGACCGGGCTCCTGATCGC
GAAGCCAAATGCCCTGATCCTCTACGCCAGCCTGGCCAAGGGGCCGAAGCTCGGTTTCGACGATCAGGTCACATCGACCC
GCCACTTCATGCGCGAGCTGAACCGCCTCGGCATCACCAGCTGCATCGACGCCGGCGGGGGCTTCCAGAACTACCCGGAC
GATTACCGGGTCATCGAGCATCTGGCCGAACGGGACGAGCTGACCCTGCGGATTGCCTACAACCTCTTCACCCAGCGGCC
CAAAGAGGAATACGACGACTTTGCCCGCTGGATAACCATGACCGGGCCGGGAAAGGGCAGCGACGTCTACAAAATGAACG
GCGCCGGCGAGATGCTGGTCTTTTCGGCCGCCGATTTCGAGGATTTCCTGGAACCGCGCCCCGATCTCATGCCGGCGATG
GAGGAGGAACTCAAGAAGGTGGTCGCCCTGCTGGTGGAGCACCGGTGGCCGTTCCGGCTCCACGCCACCTATGACGAGTC
GATCTCCCGCTTCCTGGCCGTCTTCGAGGCGGTGGACCGGGAGATCCCGTTTCGGGGGCTGCGCTGGTTCTTCGACCATG
CCGAGACCATCTCGAACCGGAATCTGGAGCGGGTCCGGCGCCTGGGCGGCGGCATTGCCATCCAGGACCGGATGGCGTTC
CAGGGCGAGTACTTCGTGGCTCGCTACGGTGCCGAGGCAGCCAAGCGGACCCCGCCCATCGCCCGGATGCTCGCCATGGG
CATCCCGGTGGGAGCGGGCACCGACGCCACGCGGGTTTCCAGCTACAACCCCTGGCTTTCCCTCTACTGGCTGGTGAGCG
GGAAGACCGTGGGCGGGCTGCCGCTGTATGACGACGCCAATCGGCTCGACCGGACCGCCGCCCTCAGGCTCTACACCGAG
GGGAGCTCCTGGTTCTCCGGCGACAACGGCAGCAAAGGGGCGCTCATCGCGGGCCGGCACGCCGACCTGGCGGTGCTGTC
GGCGGACTACTTCGCCGTTCCCGAGGCGCGGATCAAAGACATCGAGTCCGTGCTGACCATCATGGGCGGGAAGATCGTTC
ACGCGAGCGACGAATTCGCCCCGCTGGCTCCGCCGCTGCCGCCGGTCAGCCCCGATTGGTCGCCGGTGGCTTCGTACGGC
GGATACCACGGCAATGCCGCCGTTTCCACCGGCCTGCGGCGTGAGCCGTGCGTGTGCCACAGCCACAGCCCGGCATGGTC
CGGCCCTGACCCCCGTTTCTGGGGGATCGGCTGTGACTGCTTCGCGTTCTGA

Upstream 100 bases:

>100_bases
AACACAGCAACCGATAACGACCCCGTAACCGCCGCGGTCATGCCGGTTTTCACCCACATTCTCCGGCCGTGGCTGGGAAA
GGACACCTAAGGGGGATATC

Downstream 100 bases:

>100_bases
GTCGGATCGCCGCCCGCGGTACCACGCACAGCGATCCACCGCTGGCGGGAATCGCTGCCGCCATCATGGCGATGCCCCGC
CAGCGGCATCAGCGCAGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 603; Mature: 603

Protein sequence:

>603_residues
MRAPDLILHNGSITTLDPSLPQVSAVAITDGRITAAGGEELLASAGRDTVRIDLKGRRAIPGLNDSHIHVIRGGLNFTME
LRWDGVPSLALALEMLREQARRTPPPQWVRVIGGWTEFQFVERRMPTLDEINRVSPDTPVFVLHLYDRALVNGAGLRALG
YTKDTPDPPGGEIQRDRAGNPTGLLIAKPNALILYASLAKGPKLGFDDQVTSTRHFMRELNRLGITSCIDAGGGFQNYPD
DYRVIEHLAERDELTLRIAYNLFTQRPKEEYDDFARWITMTGPGKGSDVYKMNGAGEMLVFSAADFEDFLEPRPDLMPAM
EEELKKVVALLVEHRWPFRLHATYDESISRFLAVFEAVDREIPFRGLRWFFDHAETISNRNLERVRRLGGGIAIQDRMAF
QGEYFVARYGAEAAKRTPPIARMLAMGIPVGAGTDATRVSSYNPWLSLYWLVSGKTVGGLPLYDDANRLDRTAALRLYTE
GSSWFSGDNGSKGALIAGRHADLAVLSADYFAVPEARIKDIESVLTIMGGKIVHASDEFAPLAPPLPPVSPDWSPVASYG
GYHGNAAVSTGLRREPCVCHSHSPAWSGPDPRFWGIGCDCFAF

Sequences:

>Translated_603_residues
MRAPDLILHNGSITTLDPSLPQVSAVAITDGRITAAGGEELLASAGRDTVRIDLKGRRAIPGLNDSHIHVIRGGLNFTME
LRWDGVPSLALALEMLREQARRTPPPQWVRVIGGWTEFQFVERRMPTLDEINRVSPDTPVFVLHLYDRALVNGAGLRALG
YTKDTPDPPGGEIQRDRAGNPTGLLIAKPNALILYASLAKGPKLGFDDQVTSTRHFMRELNRLGITSCIDAGGGFQNYPD
DYRVIEHLAERDELTLRIAYNLFTQRPKEEYDDFARWITMTGPGKGSDVYKMNGAGEMLVFSAADFEDFLEPRPDLMPAM
EEELKKVVALLVEHRWPFRLHATYDESISRFLAVFEAVDREIPFRGLRWFFDHAETISNRNLERVRRLGGGIAIQDRMAF
QGEYFVARYGAEAAKRTPPIARMLAMGIPVGAGTDATRVSSYNPWLSLYWLVSGKTVGGLPLYDDANRLDRTAALRLYTE
GSSWFSGDNGSKGALIAGRHADLAVLSADYFAVPEARIKDIESVLTIMGGKIVHASDEFAPLAPPLPPVSPDWSPVASYG
GYHGNAAVSTGLRREPCVCHSHSPAWSGPDPRFWGIGCDCFAF
>Mature_603_residues
MRAPDLILHNGSITTLDPSLPQVSAVAITDGRITAAGGEELLASAGRDTVRIDLKGRRAIPGLNDSHIHVIRGGLNFTME
LRWDGVPSLALALEMLREQARRTPPPQWVRVIGGWTEFQFVERRMPTLDEINRVSPDTPVFVLHLYDRALVNGAGLRALG
YTKDTPDPPGGEIQRDRAGNPTGLLIAKPNALILYASLAKGPKLGFDDQVTSTRHFMRELNRLGITSCIDAGGGFQNYPD
DYRVIEHLAERDELTLRIAYNLFTQRPKEEYDDFARWITMTGPGKGSDVYKMNGAGEMLVFSAADFEDFLEPRPDLMPAM
EEELKKVVALLVEHRWPFRLHATYDESISRFLAVFEAVDREIPFRGLRWFFDHAETISNRNLERVRRLGGGIAIQDRMAF
QGEYFVARYGAEAAKRTPPIARMLAMGIPVGAGTDATRVSSYNPWLSLYWLVSGKTVGGLPLYDDANRLDRTAALRLYTE
GSSWFSGDNGSKGALIAGRHADLAVLSADYFAVPEARIKDIESVLTIMGGKIVHASDEFAPLAPPLPPVSPDWSPVASYG
GYHGNAAVSTGLRREPCVCHSHSPAWSGPDPRFWGIGCDCFAF

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 66606; Mature: 66606

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAPDLILHNGSITTLDPSLPQVSAVAITDGRITAAGGEELLASAGRDTVRIDLKGRRAI
CCCCCEEEECCEEEEECCCCCCEEEEEEECCEEEECCCHHHHHHCCCCEEEEEECCCCCC
PGLNDSHIHVIRGGLNFTMELRWDGVPSLALALEMLREQARRTPPPQWVRVIGGWTEFQF
CCCCCCEEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHH
VERRMPTLDEINRVSPDTPVFVLHLYDRALVNGAGLRALGYTKDTPDPPGGEIQRDRAGN
HHHHCCCHHHHHCCCCCCCEEEEEEHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCC
PTGLLIAKPNALILYASLAKGPKLGFDDQVTSTRHFMRELNRLGITSCIDAGGGFQNYPD
CCEEEEECCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCH
DYRVIEHLAERDELTLRIAYNLFTQRPKEEYDDFARWITMTGPGKGSDVYKMNGAGEMLV
HHHHHHHHHCCCCEEEEEEEHHHHCCCHHHHHHHHHEEEEECCCCCCCEEEECCCCCEEE
FSAADFEDFLEPRPDLMPAMEEELKKVVALLVEHRWPFRLHATYDESISRFLAVFEAVDR
EECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHC
EIPFRGLRWFFDHAETISNRNLERVRRLGGGIAIQDRMAFQGEYFVARYGAEAAKRTPPI
CCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEECCHHCCCCEEEEECCCHHHHCCCHH
ARMLAMGIPVGAGTDATRVSSYNPWLSLYWLVSGKTVGGLPLYDDANRLDRTAALRLYTE
HHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCEECCCCCCCCHHHHCCEEEEEEEEC
GSSWFSGDNGSKGALIAGRHADLAVLSADYFAVPEARIKDIESVLTIMGGKIVHASDEFA
CCCEECCCCCCCCCEEECCCCCEEEEECCCEECCCHHHHHHHHHHHHHCCEEEECCCCCC
PLAPPLPPVSPDWSPVASYGGYHGNAAVSTGLRREPCVCHSHSPAWSGPDPRFWGIGCDC
CCCCCCCCCCCCCCHHHHCCCCCCCHHHHCCCCCCCCEECCCCCCCCCCCCCEEECCCHH
FAF
CCC
>Mature Secondary Structure
MRAPDLILHNGSITTLDPSLPQVSAVAITDGRITAAGGEELLASAGRDTVRIDLKGRRAI
CCCCCEEEECCEEEEECCCCCCEEEEEEECCEEEECCCHHHHHHCCCCEEEEEECCCCCC
PGLNDSHIHVIRGGLNFTMELRWDGVPSLALALEMLREQARRTPPPQWVRVIGGWTEFQF
CCCCCCEEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHH
VERRMPTLDEINRVSPDTPVFVLHLYDRALVNGAGLRALGYTKDTPDPPGGEIQRDRAGN
HHHHCCCHHHHHCCCCCCCEEEEEEHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCC
PTGLLIAKPNALILYASLAKGPKLGFDDQVTSTRHFMRELNRLGITSCIDAGGGFQNYPD
CCEEEEECCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCH
DYRVIEHLAERDELTLRIAYNLFTQRPKEEYDDFARWITMTGPGKGSDVYKMNGAGEMLV
HHHHHHHHHCCCCEEEEEEEHHHHCCCHHHHHHHHHEEEEECCCCCCCEEEECCCCCEEE
FSAADFEDFLEPRPDLMPAMEEELKKVVALLVEHRWPFRLHATYDESISRFLAVFEAVDR
EECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHC
EIPFRGLRWFFDHAETISNRNLERVRRLGGGIAIQDRMAFQGEYFVARYGAEAAKRTPPI
CCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEECCHHCCCCEEEEECCCHHHHCCCHH
ARMLAMGIPVGAGTDATRVSSYNPWLSLYWLVSGKTVGGLPLYDDANRLDRTAALRLYTE
HHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCEECCCCCCCCHHHHCCEEEEEEEEC
GSSWFSGDNGSKGALIAGRHADLAVLSADYFAVPEARIKDIESVLTIMGGKIVHASDEFA
CCCEECCCCCCCCCEEECCCCCEEEEECCCEECCCHHHHHHHHHHHHHCCEEEECCCCCC
PLAPPLPPVSPDWSPVASYGGYHGNAAVSTGLRREPCVCHSHSPAWSGPDPRFWGIGCDC
CCCCCCCCCCCCCCHHHHCCCCCCCHHHHCCCCCCCCEECCCCCCCCCCCCCEEECCCHH
FAF
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]