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The map label for this gene is ybjZ [C]

Identifier: 39996442

GI number: 39996442

Start: 1466389

End: 1467549

Strand: Direct

Name: ybjZ [C]

Synonym: GSU1340

Alternate gene names: 39996442

Gene position: 1466389-1467549 (Clockwise)

Preceding gene: 39996441

Following gene: 39996443

Centisome position: 38.45

GC content: 65.12

Gene sequence:

>1161_bases
ATGAAGCTGCATAACATCTCGATCAACAACCTGCGCCGCCGCCGGGCCAAGATGCTCTTTCTCACCGTGGGGCTCGCCGT
GGGGATTGCCACCATCGTCACCCTCATGACCCTCACCGCCTCCATGTCCAACGACATCGGGCGCAAGATGGACGAATTCG
GCGCCAATATCCTGATCACCCCCCAGAGCAACGACCTCTCCATGAGCTACGGGGGCATCAGCCTGGGCCGGGTCACCTTC
GACCAGCGGGAGATCCGTCAGGAGGACCTGGCGCGGATCACCGCCATCAAGAACAACAAAAACATCCTGGCTGTATCCCC
CAAGGTTCTTGGCGGGGTACGATTCGGCGACAAGGACGCCCTCCTGGTGGGGGTCGACTTCGAGAGCGAACTCAAGATGA
AACAGTGGTGGCGGGTTTTCGGCGAGGTGCCCAAGGACGGCGCGGGCGTGCTCCTGGGCAGTTCCGCTGCGGACACGGCC
CATCTTACCCCGGGCGACGCCGTCACCATTGCCGGACGTTCCTTCACCGTCACCGGCGTACTCGATCAGACCGGCTCCCA
GGACGACTCCCTCATCTTCATGCCCCTGGCCGACGCCCAGAAACTGCTGGGCAAGGAAGGGCGGATCACCCTGGTGGAAG
TGGCGGCCCTCTGCTCCGGCTGCCCCATCGGCGACATGGTGGTGCAGATCGCCGAAAAGCTCCCCGAAGCAAAGGTCACC
GCCATCCAGCAGGTGGTCGAGTCGCGGCTCAAGGCCCTGGACCATTTCCGCCGCTTCGCCTACGCCGTGGCCGGCGTGGT
CATCTTCATCGGCTCACTCATCGTCTTCGTCACCATGATGGGGAGCGTCAACGAGCGCACCACCGAGATCGGCGTGTTCC
GCGCCATCGGCTTCCGCAGGAGCCACATCATCCGGATCATCCTGCTGGAGGCGGCCCTGGTGAGCGTCCTGGCCGGGCTC
GTCGGCTACGCCGCCGGCATGGGCGGGGCCACCGTGGCGCTCCCGTTCATGGCCGAAAGCAAGGACGCCGTCCTGGTCTG
GGATTCTACGGTCCTGGCCGGGTCGGTCCTCCTCTCCCTGGTGGTGGGGATGCTGGCGAGCCTCTACCCGGCGCTCCACG
CCAGCAGGATGGACCCCACCGAGGCGCTCAGGGCGCTGTAA

Upstream 100 bases:

>100_bases
CCGGCGGCAATCTGGTTATCAACGTAGCCGACATCCGCACCGGCGCCCGGTTCTTCTGAGCCCGGCAGCCTGACAACAGT
ACACAGGAACGGGGAGCTCC

Downstream 100 bases:

>100_bases
CGTACACCGCAACCATAGTTCGGGGGAACGCAATGGCACTCATACAAATCAATGATCTCACCAGGCACTACGCCGGCGGC
GACGAGACCGTCCAGGCGCT

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MKLHNISINNLRRRRAKMLFLTVGLAVGIATIVTLMTLTASMSNDIGRKMDEFGANILITPQSNDLSMSYGGISLGRVTF
DQREIRQEDLARITAIKNNKNILAVSPKVLGGVRFGDKDALLVGVDFESELKMKQWWRVFGEVPKDGAGVLLGSSAADTA
HLTPGDAVTIAGRSFTVTGVLDQTGSQDDSLIFMPLADAQKLLGKEGRITLVEVAALCSGCPIGDMVVQIAEKLPEAKVT
AIQQVVESRLKALDHFRRFAYAVAGVVIFIGSLIVFVTMMGSVNERTTEIGVFRAIGFRRSHIIRIILLEAALVSVLAGL
VGYAAGMGGATVALPFMAESKDAVLVWDSTVLAGSVLLSLVVGMLASLYPALHASRMDPTEALRAL

Sequences:

>Translated_386_residues
MKLHNISINNLRRRRAKMLFLTVGLAVGIATIVTLMTLTASMSNDIGRKMDEFGANILITPQSNDLSMSYGGISLGRVTF
DQREIRQEDLARITAIKNNKNILAVSPKVLGGVRFGDKDALLVGVDFESELKMKQWWRVFGEVPKDGAGVLLGSSAADTA
HLTPGDAVTIAGRSFTVTGVLDQTGSQDDSLIFMPLADAQKLLGKEGRITLVEVAALCSGCPIGDMVVQIAEKLPEAKVT
AIQQVVESRLKALDHFRRFAYAVAGVVIFIGSLIVFVTMMGSVNERTTEIGVFRAIGFRRSHIIRIILLEAALVSVLAGL
VGYAAGMGGATVALPFMAESKDAVLVWDSTVLAGSVLLSLVVGMLASLYPALHASRMDPTEALRAL
>Mature_386_residues
MKLHNISINNLRRRRAKMLFLTVGLAVGIATIVTLMTLTASMSNDIGRKMDEFGANILITPQSNDLSMSYGGISLGRVTF
DQREIRQEDLARITAIKNNKNILAVSPKVLGGVRFGDKDALLVGVDFESELKMKQWWRVFGEVPKDGAGVLLGSSAADTA
HLTPGDAVTIAGRSFTVTGVLDQTGSQDDSLIFMPLADAQKLLGKEGRITLVEVAALCSGCPIGDMVVQIAEKLPEAKVT
AIQQVVESRLKALDHFRRFAYAVAGVVIFIGSLIVFVTMMGSVNERTTEIGVFRAIGFRRSHIIRIILLEAALVSVLAGL
VGYAAGMGGATVALPFMAESKDAVLVWDSTVLAGSVLLSLVVGMLASLYPALHASRMDPTEALRAL

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 41299; Mature: 41299

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLHNISINNLRRRRAKMLFLTVGLAVGIATIVTLMTLTASMSNDIGRKMDEFGANILIT
CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
PQSNDLSMSYGGISLGRVTFDQREIRQEDLARITAIKNNKNILAVSPKVLGGVRFGDKDA
CCCCCCEEEECCEEEEEEECCHHHHHHHHHHHHHEEECCCCEEEECHHHHCCCEECCCCE
LLVGVDFESELKMKQWWRVFGEVPKDGAGVLLGSSAADTAHLTPGDAVTIAGRSFTVTGV
EEEEECCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCEEEEECCEEEEEEE
LDQTGSQDDSLIFMPLADAQKLLGKEGRITLVEVAALCSGCPIGDMVVQIAEKLPEAKVT
ECCCCCCCCCEEEEECHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHH
AIQQVVESRLKALDHFRRFAYAVAGVVIFIGSLIVFVTMMGSVNERTTEIGVFRAIGFRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
SHIIRIILLEAALVSVLAGLVGYAAGMGGATVALPFMAESKDAVLVWDSTVLAGSVLLSL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEECCHHHHHHHHHHH
VVGMLASLYPALHASRMDPTEALRAL
HHHHHHHHHHHHHHCCCCHHHHHHCC
>Mature Secondary Structure
MKLHNISINNLRRRRAKMLFLTVGLAVGIATIVTLMTLTASMSNDIGRKMDEFGANILIT
CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
PQSNDLSMSYGGISLGRVTFDQREIRQEDLARITAIKNNKNILAVSPKVLGGVRFGDKDA
CCCCCCEEEECCEEEEEEECCHHHHHHHHHHHHHEEECCCCEEEECHHHHCCCEECCCCE
LLVGVDFESELKMKQWWRVFGEVPKDGAGVLLGSSAADTAHLTPGDAVTIAGRSFTVTGV
EEEEECCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCEEEEECCEEEEEEE
LDQTGSQDDSLIFMPLADAQKLLGKEGRITLVEVAALCSGCPIGDMVVQIAEKLPEAKVT
ECCCCCCCCCEEEEECHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHH
AIQQVVESRLKALDHFRRFAYAVAGVVIFIGSLIVFVTMMGSVNERTTEIGVFRAIGFRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
SHIIRIILLEAALVSVLAGLVGYAAGMGGATVALPFMAESKDAVLVWDSTVLAGSVLLSL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEECCHHHHHHHHHHH
VVGMLASLYPALHASRMDPTEALRAL
HHHHHHHHHHHHHHCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]