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The map label for this gene is 39996382

Identifier: 39996382

GI number: 39996382

Start: 1395768

End: 1396580

Strand: Direct

Name: 39996382

Synonym: GSU1280

Alternate gene names: NA

Gene position: 1395768-1396580 (Clockwise)

Preceding gene: 39996381

Following gene: 39996383

Centisome position: 36.59

GC content: 63.71

Gene sequence:

>813_bases
ATGGCTCCCATTGAATCGGCACTCCGTGAGCTGAACCGGCTTGATCTTCTCGCTGGCGGAAACTCGGCCGTCCACCGGCT
CGATCCCCGGGCAAAGGTGTTCGTCACCTTCGCGTTCATAGTTGCGGTCGTTTCCCTGGGGCGCTATGAGTTGGCGGCCC
TTGTCCCCTTTGCGGTGTTTCCGGTGGCCCTGGCTGCCTCAGCCGGCCTGCCGGCAACGGTCATCCTCCGGAAACTGCTG
CTGGTCCTCCCCTTTGCCGTGGTGGTGGGATTGTTCAACCCCCTGCTGGATCGGCAACCCCTGCTCGCCCTCGGCCCCCT
GGTTATATCCGGGGGATGGATTTCATTTCTGTCCATTATCGTCCGGTCACTCCTCACGGTTGGTGCCGCAGTCGTACTCG
TGGCTGTCACCGGGTTTTCGGGCATCTGCATGGCCCTGGAGCGGTTCGGGGTTCCCCGGCCGTTCGTGGTCCAGCTGCTG
TTCCTCTATCGCTATCTCTTCGTTCTGGCAGACGAGGGGGGACGGATGGTCCGGGCACGGGAGCTGCGCACCTTTTCCGG
TCGGGGGAGGGGGCTGAAGGCCTACTCCGCCCTGGTGGGCAGCCTGCTTCTGCGCACCTGGGACCGGGCCGAACGGATTC
ACATGGCCATGCTCTCGCGGGGCTTCAACGGGCAATTCCACGTGCGGCGCGAGATCCGTCCAGGCCGCGCCGATTGGATC
TTCACAGCCGGCTGGTGTGCGCTTTTCGTGCTGTTCAGGCTGGTAAACATTCCCCACCTGCTGGGGGGGCTGGTAACGGG
GGGATATCCATGA

Upstream 100 bases:

>100_bases
TGTAGGGGGGGCGCTGACGCTGGGCGTCGCGTTCCTCATTGGCCTGATCCTGCGCCACCGGGCGTCTTCGTAAGCGGTTC
CGTCCTGATCGCTGCCCTCC

Downstream 100 bases:

>100_bases
GCCACCACATTGTCGAGGTCCGCGACCTCTGCCATTGCTACCCCGACGGTACGGAAGCCCTGCGCGGCATAACCTTCCGG
ATTCATCATGGTGAATCGGT

Product: cobalt ABC transporter permease

Products: NA

Alternate protein names: Cobalt ABC Transporter Permease; Cobalt ABC Transporter; Cobalt ABC Transporter Permease Protein CbiQ; Cobalt ABC Transporter Permease CbiQ; Cobalt Abc Transporter Permease Protein Cbiq; Cobalt ABC Transporter Permease Protein; Cobalt ABC Transporter CbiQ Permease Subunit; Nickel ABC Transporter Membrane Protein NikQ; Integral Membrane Transporter; ABC Cobalt Transporter

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MAPIESALRELNRLDLLAGGNSAVHRLDPRAKVFVTFAFIVAVVSLGRYELAALVPFAVFPVALAASAGLPATVILRKLL
LVLPFAVVVGLFNPLLDRQPLLALGPLVISGGWISFLSIIVRSLLTVGAAVVLVAVTGFSGICMALERFGVPRPFVVQLL
FLYRYLFVLADEGGRMVRARELRTFSGRGRGLKAYSALVGSLLLRTWDRAERIHMAMLSRGFNGQFHVRREIRPGRADWI
FTAGWCALFVLFRLVNIPHLLGGLVTGGYP

Sequences:

>Translated_270_residues
MAPIESALRELNRLDLLAGGNSAVHRLDPRAKVFVTFAFIVAVVSLGRYELAALVPFAVFPVALAASAGLPATVILRKLL
LVLPFAVVVGLFNPLLDRQPLLALGPLVISGGWISFLSIIVRSLLTVGAAVVLVAVTGFSGICMALERFGVPRPFVVQLL
FLYRYLFVLADEGGRMVRARELRTFSGRGRGLKAYSALVGSLLLRTWDRAERIHMAMLSRGFNGQFHVRREIRPGRADWI
FTAGWCALFVLFRLVNIPHLLGGLVTGGYP
>Mature_269_residues
APIESALRELNRLDLLAGGNSAVHRLDPRAKVFVTFAFIVAVVSLGRYELAALVPFAVFPVALAASAGLPATVILRKLLL
VLPFAVVVGLFNPLLDRQPLLALGPLVISGGWISFLSIIVRSLLTVGAAVVLVAVTGFSGICMALERFGVPRPFVVQLLF
LYRYLFVLADEGGRMVRARELRTFSGRGRGLKAYSALVGSLLLRTWDRAERIHMAMLSRGFNGQFHVRREIRPGRADWIF
TAGWCALFVLFRLVNIPHLLGGLVTGGYP

Specific function: Unknown

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29463; Mature: 29332

Theoretical pI: Translated: 11.81; Mature: 11.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPIESALRELNRLDLLAGGNSAVHRLDPRAKVFVTFAFIVAVVSLGRYELAALVPFAVF
CCCHHHHHHHHHHHHHEECCCCHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
PVALAASAGLPATVILRKLLLVLPFAVVVGLFNPLLDRQPLLALGPLVISGGWISFLSII
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHH
VRSLLTVGAAVVLVAVTGFSGICMALERFGVPRPFVVQLLFLYRYLFVLADEGGRMVRAR
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHH
ELRTFSGRGRGLKAYSALVGSLLLRTWDRAERIHMAMLSRGFNGQFHVRREIRPGRADWI
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEE
FTAGWCALFVLFRLVNIPHLLGGLVTGGYP
EHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
APIESALRELNRLDLLAGGNSAVHRLDPRAKVFVTFAFIVAVVSLGRYELAALVPFAVF
CCHHHHHHHHHHHHHEECCCCHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
PVALAASAGLPATVILRKLLLVLPFAVVVGLFNPLLDRQPLLALGPLVISGGWISFLSII
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHH
VRSLLTVGAAVVLVAVTGFSGICMALERFGVPRPFVVQLLFLYRYLFVLADEGGRMVRAR
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHH
ELRTFSGRGRGLKAYSALVGSLLLRTWDRAERIHMAMLSRGFNGQFHVRREIRPGRADWI
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEE
FTAGWCALFVLFRLVNIPHLLGGLVTGGYP
EHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA