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The map label for this gene is 39996359

Identifier: 39996359

GI number: 39996359

Start: 1369743

End: 1371368

Strand: Direct

Name: 39996359

Synonym: GSU1257

Alternate gene names: NA

Gene position: 1369743-1371368 (Clockwise)

Preceding gene: 39996358

Following gene: 39996360

Centisome position: 35.91

GC content: 62.73

Gene sequence:

>1626_bases
ATGATCGGCATGACGGTACGGACGGCGAGATCATGCCTGACCTCACTGGCGCTGCTGCTCCTGGCTTTTGCGGCCGGAGC
ACTGGCTCCCCTGCAGCAGTCGTGGGCTTCGCCCGGGCTCACTCCGGCCGAGGAGCGGGGGCGGCAGATTTACTTCGACG
GTACGAGCCCGTCGGGGGCGCCGATCATTGCCTATTTCGGCAAGGACTACCTGGAGGTGCCCGGCGAATCGGCCACATGC
ACCAGTTGTCACGGCTTCGACGGACTCGGCCGTACCGAAAGCGGCGTCATCCCTTCCAATGTCACTTGGCAGCACCTTAT
GAAAAGCTACGGCCACGTCCACCCCGACGGCCAGGTCCACGGGGCGTTCAACGAAGAGAGCCTGAAGAGCTACATGCGTG
ACGGCCTCTACCCCGGCGGGGTGCTGGGTGATCCGGCCATGCCGGTTTACGAGATCTCCGAGCAGGACCTGGATGACCTC
ATCGCCTACATGAAACGGCTGGGCATCCACCCCGATCCGGGTGTCAGCGCCACTACCGTGCGAGTCGGCACGATCATTCC
CGCTGAAGGAGCCACGGCTGCTCTCGGCGAAGCTCTCACCGCCACGGTGCGCGCCTCGTTCGCCGATGTGAAGGAGCGGG
GCGGAGTGTATGGCAGAAACCCCGAGCTGGTCGTCGCCACGATTGCCTCCGGCCAGGATCTGAAGTCGGTGTTCCGTCGC
CTGGTGGAGGAACAGCAGGTGTTCGCCCTGCTCAATACCTTGACTCCCGGTCAGGAGCGCGAACTGGAAACCCTGGCGGA
AGAATTTCATGTTCCCCTCATCGCCCCCTTCGCGCCTGTCCATACGGATGATCAGCTGCTGCACCGCTACCGGTTCCACC
TGCACGGGGGGGTGCGGGAACAGTCGCTCGGCCTGGTTTCGTTCGCCATCAAGAAGCGTGGCGCCGGGGATTCCCGGATC
GCCATCGTCTACCCCGCGCGGGAAGAGATCGAAGAGGTGGCGGTATCCATCGATGATGCCTGCCGGGCCGGCGGAGGGCA
GCGGGTTGTCAGGATTTCCCATGCTCCCGGCCTGTTCGACGCGGCGGCTACCGTGAGCCGGCTGCAAGCGGAGCAGGTTG
AGGTGGTGTTTTTCCTGGGCGGGGAAGGGGAGTCTGACTCCTTTTTCCGGGAGGCCGAAGCGCGCGCCTACATTCCGTCG
TTTTTCATGCCGGGCTTCCTGTTGGGTAAAGGGATTACCCAGGTGCCGGCGGCATTCAGCGGAAAGGTCTGGCTGGCGTT
TCCCTCCCTGCCTGAGGACCGGAAAGAATGGGGCCTGGCAGAATTCAACGCTGTCATGGGGCGGCAGAGAGTGGTTGTGG
GCAACCCAACCGTCCAGTTGACGGCTTTTACCGGGGCCAAACTTTTTCTGGAAGGGCTGCGGCGCGCAGGGCGGGACCTC
AGCAGGGAACGGTTCGTGGAAACCTTGGAAAAGGTGTTCGAGTATGACACGGGTCTTGCCCAGACCATTACCTATACTAG
AAACCACCGTATCGGCACGTTGGGTACCCACGTAGTGGTGGTGGATCCGCTCCAGGCGGGCACGGAGAAGTTTATTATAC
CGCAGGGATGGATCGACCTGGAGTAG

Upstream 100 bases:

>100_bases
ACCTCAGGACCGGCCACTGGATCAAGAATAAACCGGAGACCTCGGCGCGAACCCTGGCGGAGCACCTGATCCAACTGGCC
GACGAAAAACAGGTGAAGCG

Downstream 100 bases:

>100_bases
CGTGGTGAGCGGTTATTAAAAAATGGGGCTTGTTCTTCGCATGCCTCCCCTGTATTGTAATGATTGGATTTTTTCCCGAG
GAGTCCCGGCATGAATACCT

Product: ABC transporter substrate-binding protein

Products: NA

Alternate protein names: Cytochrome C Family Protein; Lipoprotein

Number of amino acids: Translated: 541; Mature: 541

Protein sequence:

>541_residues
MIGMTVRTARSCLTSLALLLLAFAAGALAPLQQSWASPGLTPAEERGRQIYFDGTSPSGAPIIAYFGKDYLEVPGESATC
TSCHGFDGLGRTESGVIPSNVTWQHLMKSYGHVHPDGQVHGAFNEESLKSYMRDGLYPGGVLGDPAMPVYEISEQDLDDL
IAYMKRLGIHPDPGVSATTVRVGTIIPAEGATAALGEALTATVRASFADVKERGGVYGRNPELVVATIASGQDLKSVFRR
LVEEQQVFALLNTLTPGQERELETLAEEFHVPLIAPFAPVHTDDQLLHRYRFHLHGGVREQSLGLVSFAIKKRGAGDSRI
AIVYPAREEIEEVAVSIDDACRAGGGQRVVRISHAPGLFDAAATVSRLQAEQVEVVFFLGGEGESDSFFREAEARAYIPS
FFMPGFLLGKGITQVPAAFSGKVWLAFPSLPEDRKEWGLAEFNAVMGRQRVVVGNPTVQLTAFTGAKLFLEGLRRAGRDL
SRERFVETLEKVFEYDTGLAQTITYTRNHRIGTLGTHVVVVDPLQAGTEKFIIPQGWIDLE

Sequences:

>Translated_541_residues
MIGMTVRTARSCLTSLALLLLAFAAGALAPLQQSWASPGLTPAEERGRQIYFDGTSPSGAPIIAYFGKDYLEVPGESATC
TSCHGFDGLGRTESGVIPSNVTWQHLMKSYGHVHPDGQVHGAFNEESLKSYMRDGLYPGGVLGDPAMPVYEISEQDLDDL
IAYMKRLGIHPDPGVSATTVRVGTIIPAEGATAALGEALTATVRASFADVKERGGVYGRNPELVVATIASGQDLKSVFRR
LVEEQQVFALLNTLTPGQERELETLAEEFHVPLIAPFAPVHTDDQLLHRYRFHLHGGVREQSLGLVSFAIKKRGAGDSRI
AIVYPAREEIEEVAVSIDDACRAGGGQRVVRISHAPGLFDAAATVSRLQAEQVEVVFFLGGEGESDSFFREAEARAYIPS
FFMPGFLLGKGITQVPAAFSGKVWLAFPSLPEDRKEWGLAEFNAVMGRQRVVVGNPTVQLTAFTGAKLFLEGLRRAGRDL
SRERFVETLEKVFEYDTGLAQTITYTRNHRIGTLGTHVVVVDPLQAGTEKFIIPQGWIDLE
>Mature_541_residues
MIGMTVRTARSCLTSLALLLLAFAAGALAPLQQSWASPGLTPAEERGRQIYFDGTSPSGAPIIAYFGKDYLEVPGESATC
TSCHGFDGLGRTESGVIPSNVTWQHLMKSYGHVHPDGQVHGAFNEESLKSYMRDGLYPGGVLGDPAMPVYEISEQDLDDL
IAYMKRLGIHPDPGVSATTVRVGTIIPAEGATAALGEALTATVRASFADVKERGGVYGRNPELVVATIASGQDLKSVFRR
LVEEQQVFALLNTLTPGQERELETLAEEFHVPLIAPFAPVHTDDQLLHRYRFHLHGGVREQSLGLVSFAIKKRGAGDSRI
AIVYPAREEIEEVAVSIDDACRAGGGQRVVRISHAPGLFDAAATVSRLQAEQVEVVFFLGGEGESDSFFREAEARAYIPS
FFMPGFLLGKGITQVPAAFSGKVWLAFPSLPEDRKEWGLAEFNAVMGRQRVVVGNPTVQLTAFTGAKLFLEGLRRAGRDL
SRERFVETLEKVFEYDTGLAQTITYTRNHRIGTLGTHVVVVDPLQAGTEKFIIPQGWIDLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58743; Mature: 58743

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGMTVRTARSCLTSLALLLLAFAAGALAPLQQSWASPGLTPAEERGRQIYFDGTSPSGA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEEECCCCCCC
PIIAYFGKDYLEVPGESATCTSCHGFDGLGRTESGVIPSNVTWQHLMKSYGHVHPDGQVH
CEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEE
GAFNEESLKSYMRDGLYPGGVLGDPAMPVYEISEQDLDDLIAYMKRLGIHPDPGVSATTV
CCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEE
RVGTIIPAEGATAALGEALTATVRASFADVKERGGVYGRNPELVVATIASGQDLKSVFRR
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHH
LVEEQQVFALLNTLTPGQERELETLAEEFHVPLIAPFAPVHTDDQLLHRYRFHLHGGVRE
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHCCCCCH
QSLGLVSFAIKKRGAGDSRIAIVYPAREEIEEVAVSIDDACRAGGGQRVVRISHAPGLFD
HHCHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHH
AAATVSRLQAEQVEVVFFLGGEGESDSFFREAEARAYIPSFFMPGFLLGKGITQVPAAFS
HHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHCCHHHCCHHHHHCCHHHCCCCCC
GKVWLAFPSLPEDRKEWGLAEFNAVMGRQRVVVGNPTVQLTAFTGAKLFLEGLRRAGRDL
CCEEEEECCCCCHHHHCCHHHHHHHHCCCEEEECCCEEEEEEECCHHHHHHHHHHHCCCC
SRERFVETLEKVFEYDTGLAQTITYTRNHRIGTLGTHVVVVDPLQAGTEKFIIPQGWIDL
HHHHHHHHHHHHHHHCCCHHHHEEEECCCCEEECCCEEEEECCCCCCCCEEECCCCCEEC
E
C
>Mature Secondary Structure
MIGMTVRTARSCLTSLALLLLAFAAGALAPLQQSWASPGLTPAEERGRQIYFDGTSPSGA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEEECCCCCCC
PIIAYFGKDYLEVPGESATCTSCHGFDGLGRTESGVIPSNVTWQHLMKSYGHVHPDGQVH
CEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEE
GAFNEESLKSYMRDGLYPGGVLGDPAMPVYEISEQDLDDLIAYMKRLGIHPDPGVSATTV
CCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEE
RVGTIIPAEGATAALGEALTATVRASFADVKERGGVYGRNPELVVATIASGQDLKSVFRR
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHH
LVEEQQVFALLNTLTPGQERELETLAEEFHVPLIAPFAPVHTDDQLLHRYRFHLHGGVRE
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHCCCCCH
QSLGLVSFAIKKRGAGDSRIAIVYPAREEIEEVAVSIDDACRAGGGQRVVRISHAPGLFD
HHCHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHH
AAATVSRLQAEQVEVVFFLGGEGESDSFFREAEARAYIPSFFMPGFLLGKGITQVPAAFS
HHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHCCHHHCCHHHHHCCHHHCCCCCC
GKVWLAFPSLPEDRKEWGLAEFNAVMGRQRVVVGNPTVQLTAFTGAKLFLEGLRRAGRDL
CCEEEEECCCCCHHHHCCHHHHHHHHCCCEEEECCCEEEEEEECCHHHHHHHHHHHCCCC
SRERFVETLEKVFEYDTGLAQTITYTRNHRIGTLGTHVVVVDPLQAGTEKFIIPQGWIDL
HHHHHHHHHHHHHHHCCCHHHHEEEECCCCEEECCCEEEEECCCCCCCCEEECCCCCEEC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA