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The map label for this gene is 39996326

Identifier: 39996326

GI number: 39996326

Start: 1328136

End: 1329095

Strand: Direct

Name: 39996326

Synonym: GSU1224

Alternate gene names: NA

Gene position: 1328136-1329095 (Clockwise)

Preceding gene: 39996325

Following gene: 39996329

Centisome position: 34.82

GC content: 62.81

Gene sequence:

>960_bases
ATGAGTGCGCAGGTGCAGGACCTGACCCCCATCAAGGGAGTCACCTACTATTACCCACCCCACGACGCGGTGCTCGTCTT
CAAGGACGGCGCGGCCGAGATTCCCTACGGCGGGCTGCCGGTCCCCCTTCTGGAGGAGGATTACGCCTCCCTCGACGGAG
AGCCTTCCTATGATGCGGTCGGAAGGGGAGTCTACCAAACCCTGCGGACCAACCCGGACTGCATCCACTGTGCGGCCTAT
GCGACGCTGCTGCGGGACGCCTACCCTCACTACCTGGCGGAGCTGGCCAGCCACGCTATCATGCTCGACAGCAAGGATGT
GGAGGTTCCTTACATCGACCGGAAGATCGTCAGCCTCAAGGTCCTCTCCCTTCTCGAACCGGACAACGCGGGACTCCCTC
TGGAGATCGGCCGTGCCTATCTCGACCGGGGGCTGCGGCTTTCGGCGCTCCACATGTCCACGGTCAGCATCTATCGGGCC
GAGCACTTCCTGCGGCGCGCCCTGGAACTGACGCCGGAAGACGGCAGAGCGCTCCGCCTGCTGGGGGAGGTCTGCTACCT
GCTGGGGAAATACGAAGAGGCGGCCTCCTGCTGGCTCGATACCCTTGATCTGGCCGATGCCGATGAAGCGGAGCGTTTCA
GGGTACGTCTTGCCCGGATCAGCGAGGGACGGCTCCCCCTTATTGCCCCGGTGGATTACCTGGAAGCCATCGGAGCAGCA
TTTACCTGTTTTCACACCGGCGACTACGAGGAAGCCGTTGCCATTCTCCAGGACGTGCTCATGGACGGGATTTTCTGCGC
CGAGTTTCCCATTGCCGACATCCATTGCGTCATCGGCAAGAGCTTCGTGCAGCTGGACATGCCGCGTTATGCCGAAGAGT
CGTTCCGCGCCGCGCTTCAGCTGGATCCGGCCCACGAGGAGTCGCTTGCCTGCCTCAGGAAGGTCACAGGGGAGGAGTAG

Upstream 100 bases:

>100_bases
ACGTGCGCATCTACAAAATGGTCGGTATCCATGCGGGAGTCGATACCTTTCCTGACCGCGAGAGCGACCTTGTTGGCGAA
ACACGAGGAGGAGTACGAAT

Downstream 100 bases:

>100_bases
GATATGTTTGGCTTCAGTATTGCAGACTGGATCTTCATTGCGCTGGTCATGGCCACGATTTTCGCCTGTGTCGCCATTAG
CGACATGCGCCGCCCGAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Domain Protein

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MSAQVQDLTPIKGVTYYYPPHDAVLVFKDGAAEIPYGGLPVPLLEEDYASLDGEPSYDAVGRGVYQTLRTNPDCIHCAAY
ATLLRDAYPHYLAELASHAIMLDSKDVEVPYIDRKIVSLKVLSLLEPDNAGLPLEIGRAYLDRGLRLSALHMSTVSIYRA
EHFLRRALELTPEDGRALRLLGEVCYLLGKYEEAASCWLDTLDLADADEAERFRVRLARISEGRLPLIAPVDYLEAIGAA
FTCFHTGDYEEAVAILQDVLMDGIFCAEFPIADIHCVIGKSFVQLDMPRYAEESFRAALQLDPAHEESLACLRKVTGEE

Sequences:

>Translated_319_residues
MSAQVQDLTPIKGVTYYYPPHDAVLVFKDGAAEIPYGGLPVPLLEEDYASLDGEPSYDAVGRGVYQTLRTNPDCIHCAAY
ATLLRDAYPHYLAELASHAIMLDSKDVEVPYIDRKIVSLKVLSLLEPDNAGLPLEIGRAYLDRGLRLSALHMSTVSIYRA
EHFLRRALELTPEDGRALRLLGEVCYLLGKYEEAASCWLDTLDLADADEAERFRVRLARISEGRLPLIAPVDYLEAIGAA
FTCFHTGDYEEAVAILQDVLMDGIFCAEFPIADIHCVIGKSFVQLDMPRYAEESFRAALQLDPAHEESLACLRKVTGEE
>Mature_318_residues
SAQVQDLTPIKGVTYYYPPHDAVLVFKDGAAEIPYGGLPVPLLEEDYASLDGEPSYDAVGRGVYQTLRTNPDCIHCAAYA
TLLRDAYPHYLAELASHAIMLDSKDVEVPYIDRKIVSLKVLSLLEPDNAGLPLEIGRAYLDRGLRLSALHMSTVSIYRAE
HFLRRALELTPEDGRALRLLGEVCYLLGKYEEAASCWLDTLDLADADEAERFRVRLARISEGRLPLIAPVDYLEAIGAAF
TCFHTGDYEEAVAILQDVLMDGIFCAEFPIADIHCVIGKSFVQLDMPRYAEESFRAALQLDPAHEESLACLRKVTGEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35415; Mature: 35284

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAQVQDLTPIKGVTYYYPPHDAVLVFKDGAAEIPYGGLPVPLLEEDYASLDGEPSYDAV
CCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHH
GRGVYQTLRTNPDCIHCAAYATLLRDAYPHYLAELASHAIMLDSKDVEVPYIDRKIVSLK
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCHHHHHHHHH
VLSLLEPDNAGLPLEIGRAYLDRGLRLSALHMSTVSIYRAEHFLRRALELTPEDGRALRL
HHHHCCCCCCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
LGEVCYLLGKYEEAASCWLDTLDLADADEAERFRVRLARISEGRLPLIAPVDYLEAIGAA
HHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHH
FTCFHTGDYEEAVAILQDVLMDGIFCAEFPIADIHCVIGKSFVQLDMPRYAEESFRAALQ
EEEEECCCHHHHHHHHHHHHHCCEEECCCCCCHHHHHHCCHHHHCCCCHHHHHHHHHHEE
LDPAHEESLACLRKVTGEE
CCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
SAQVQDLTPIKGVTYYYPPHDAVLVFKDGAAEIPYGGLPVPLLEEDYASLDGEPSYDAV
CCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHH
GRGVYQTLRTNPDCIHCAAYATLLRDAYPHYLAELASHAIMLDSKDVEVPYIDRKIVSLK
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCHHHHHHHHH
VLSLLEPDNAGLPLEIGRAYLDRGLRLSALHMSTVSIYRAEHFLRRALELTPEDGRALRL
HHHHCCCCCCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
LGEVCYLLGKYEEAASCWLDTLDLADADEAERFRVRLARISEGRLPLIAPVDYLEAIGAA
HHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHH
FTCFHTGDYEEAVAILQDVLMDGIFCAEFPIADIHCVIGKSFVQLDMPRYAEESFRAALQ
EEEEECCCHHHHHHHHHHHHHCCEEECCCCCCHHHHHHCCHHHHCCCCHHHHHHHHHHEE
LDPAHEESLACLRKVTGEE
CCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA