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The map label for this gene is yclJ [H]

Identifier: 39996322

GI number: 39996322

Start: 1323513

End: 1324346

Strand: Reverse

Name: yclJ [H]

Synonym: GSU1220

Alternate gene names: 39996322

Gene position: 1324346-1323513 (Counterclockwise)

Preceding gene: 39996323

Following gene: 39996315

Centisome position: 34.72

GC content: 58.87

Gene sequence:

>834_bases
ATGTCGGACAAGAAGCAGTTGGGCGATCTTCTCGTGGAGGCTGGGATCATCACGATGAAGACCCTTGAGCGGGCCCTCGA
ACGCCAGAAGGGGAGCGGCAAACGCCTCGGCCAGGTTCTGGAAGAGATGGGGGTCATTAACGGCGACGAATTGATCGATG
CTCTTTCAAAACAGTTTGCCTTCAAGACGGTGAGAGGATTCGCGGACTATGCGTTCCCCCCCGAGCTGCTCGCTCTTGTG
CCCCAGGACATCGCGGTGCAGAAGCAGGTGTTTCCCATCAAGCAGAAGGACAACATGCTGGCGCTCGCCGTCAATGACCC
CTTCGACGTAGAAACAATCGATTTTTTGGCCAAAAAGAACGGGGTACAGATCATCCCGGTCCTGGCCACCCGCCAGGACC
TGCTGGCTGCGATCGAAAAGCACTACCTGCACGGTAAAGCCAAGGATTCCCAGCGTCAGAAGATCCTGGTGGTTGAGGAT
ACGCCACCGGTGGCCACGATCATCCAGGTGGCCCTGCACAAGGAAGGATTCGATGTCCTGTTGGCCGGCGACGGCGTGGA
AGGGCTCAAAACCGCCGTGGTGGAAAAGCCCGACCTGATCATCTGCGACTCGGTCATGCCCCGCATGGATGGATTCAGCC
TCATGCGGGCGGTACGGTCAAACCCCACGATCGCAGACACCCCCATGATCCTCCTGACCTCCAAGGCCACCGGCGAGGAC
GAGCAGCGGGCTCTGGAGGCCGGCTTCATTGATTTCATCGCCAAGCCGGTTCAGCCCATCCGGATCGTAACACGCGTGCG
GCGGGCCTTCGACCTCCTGAAACGGTTCAAATAA

Upstream 100 bases:

>100_bases
GCAATTAGTGTGATATCAAGCGGTTGGTATACGGTACAAAGTGTGTCATAGTAGTGATCGGACCGCTTGATCACTATCAG
GGAAGCAACGGAGAGCATAC

Downstream 100 bases:

>100_bases
CACCACATCCACTGCACCGGCGGGTCGCCGGGGCAGCAGAACATTTCGACAAAAAAGGGGCGGCACGAATCCGATCGTGC
CGCCCCTTTTGCAGTGCGCG

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MSDKKQLGDLLVEAGIITMKTLERALERQKGSGKRLGQVLEEMGVINGDELIDALSKQFAFKTVRGFADYAFPPELLALV
PQDIAVQKQVFPIKQKDNMLALAVNDPFDVETIDFLAKKNGVQIIPVLATRQDLLAAIEKHYLHGKAKDSQRQKILVVED
TPPVATIIQVALHKEGFDVLLAGDGVEGLKTAVVEKPDLIICDSVMPRMDGFSLMRAVRSNPTIADTPMILLTSKATGED
EQRALEAGFIDFIAKPVQPIRIVTRVRRAFDLLKRFK

Sequences:

>Translated_277_residues
MSDKKQLGDLLVEAGIITMKTLERALERQKGSGKRLGQVLEEMGVINGDELIDALSKQFAFKTVRGFADYAFPPELLALV
PQDIAVQKQVFPIKQKDNMLALAVNDPFDVETIDFLAKKNGVQIIPVLATRQDLLAAIEKHYLHGKAKDSQRQKILVVED
TPPVATIIQVALHKEGFDVLLAGDGVEGLKTAVVEKPDLIICDSVMPRMDGFSLMRAVRSNPTIADTPMILLTSKATGED
EQRALEAGFIDFIAKPVQPIRIVTRVRRAFDLLKRFK
>Mature_276_residues
SDKKQLGDLLVEAGIITMKTLERALERQKGSGKRLGQVLEEMGVINGDELIDALSKQFAFKTVRGFADYAFPPELLALVP
QDIAVQKQVFPIKQKDNMLALAVNDPFDVETIDFLAKKNGVQIIPVLATRQDLLAAIEKHYLHGKAKDSQRQKILVVEDT
PPVATIIQVALHKEGFDVLLAGDGVEGLKTAVVEKPDLIICDSVMPRMDGFSLMRAVRSNPTIADTPMILLTSKATGEDE
QRALEAGFIDFIAKPVQPIRIVTRVRRAFDLLKRFK

Specific function: Could be member of the two-component regulatory system yclK/yclJ [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=115, Percent_Identity=31.304347826087, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI87082012, Length=114, Percent_Identity=32.4561403508772, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1786784, Length=122, Percent_Identity=34.4262295081967, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1790860, Length=128, Percent_Identity=32.03125, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1790437, Length=104, Percent_Identity=33.6538461538462, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1788550, Length=120, Percent_Identity=32.5, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1788394, Length=129, Percent_Identity=31.7829457364341, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787487, Length=106, Percent_Identity=33.0188679245283, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 30655; Mature: 30524

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDKKQLGDLLVEAGIITMKTLERALERQKGSGKRLGQVLEEMGVINGDELIDALSKQFA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
FKTVRGFADYAFPPELLALVPQDIAVQKQVFPIKQKDNMLALAVNDPFDVETIDFLAKKN
HHHHHHHHHCCCCHHHHHHCCHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHCC
GVQIIPVLATRQDLLAAIEKHYLHGKAKDSQRQKILVVEDTPPVATIIQVALHKEGFDVL
CCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCEEE
LAGDGVEGLKTAVVEKPDLIICDSVMPRMDGFSLMRAVRSNPTIADTPMILLTSKATGED
EECCCHHHHHHHHHCCCCEEEECCHHCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCH
EQRALEAGFIDFIAKPVQPIRIVTRVRRAFDLLKRFK
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SDKKQLGDLLVEAGIITMKTLERALERQKGSGKRLGQVLEEMGVINGDELIDALSKQFA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
FKTVRGFADYAFPPELLALVPQDIAVQKQVFPIKQKDNMLALAVNDPFDVETIDFLAKKN
HHHHHHHHHCCCCHHHHHHCCHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHCC
GVQIIPVLATRQDLLAAIEKHYLHGKAKDSQRQKILVVEDTPPVATIIQVALHKEGFDVL
CCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCEEE
LAGDGVEGLKTAVVEKPDLIICDSVMPRMDGFSLMRAVRSNPTIADTPMILLTSKATGED
EECCCHHHHHHHHHCCCCEEEECCHHCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCH
EQRALEAGFIDFIAKPVQPIRIVTRVRRAFDLLKRFK
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]