| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39996166
Identifier: 39996166
GI number: 39996166
Start: 1150102
End: 1151028
Strand: Direct
Name: 39996166
Synonym: GSU1064
Alternate gene names: NA
Gene position: 1150102-1151028 (Clockwise)
Preceding gene: 39996165
Following gene: 39996167
Centisome position: 30.15
GC content: 62.24
Gene sequence:
>927_bases ATGCAGCAGCAAGCCCGGCTGGCCATGACCGCCATGGAGCGGGACCTGCGGATGACAGGCTATGGCCTGAGCGATGTGGG TAATCTGAAGATACGGTTCTACAACAAGGGGGTCGGCACGGTTACCGACAATTACTACGCGGTTGCCGAGGCAAACGTCT TCGGCTCCCCCAAGGTGGCAGTGCCGGCGGCGGATACCGATTCCATCGCCATCCGTTATTGCGATCAGCCCTCCGACGCG ATGCCGGACATTACCCTGTCAGGAAGTGTCCCGCCGCCATCGTCGAGCAATACCCCGGTCAGCTCGACCGACGGGATTAA CGCTAACGACCTGATCATCATCTACGATCCCACTGATCTTGCCAAGTACGGCTCAATCCTGATGGTAACGGATACGACGT CCGCCGGCGGATTGTCGGTCAAACACGGCAACGGAGCGGGCGACGGGCCATTGGCCTCCTTCTACAATCCGTCCAACCCT GCCGTCAACCTGTTTCCACCGGGCGGCTATCCGGTCGGAGCCAAGGTGCTGAGACTGGCCCCCGAGGCCCTCCGCACCGT GAGGTACTACGTGGATGCCGGCATGAACCTGCGCCGGCAGTCACAGGCCGGCCTGACCGGCGCAGTGGAGGAGCGGCCGG TCGCCTCGGGGATCGAGGATTTTCAGGTCAAATATTACTTCCGGGATGGTACGTGGCTCGATGCCCCCGTCACCGACGAT CCCGACCATGACGTCGACAAGCTGCGGGCGGTGCGGATCAGCATTATCGTGCGAACGGCAAAGCCTGACCGACAGTACGG GGCCGGAGATTCGATCCGGCTCACCGGAGACGACGGCAACGGTGTGGCCCGGAGCGGGGGAGGGTACCGCCGGATGGTGA TGAGCACGACAATCTCGCTGCGAAACCTTGCCGTCAGGGATATGTGA
Upstream 100 bases:
>100_bases GCTGGTGGTGATCGTGATCTTCGCGATTATCACGGCCGGCGTTTCAGCAGTGTTCCTTCGCGGGCAGCACGAATACCTTG TTCGGGAGGAGGCCGTCCGG
Downstream 100 bases:
>100_bases AAAGGGAGATGCGATGGTCCGTCCGCTGACAAACAACCGGGGAGCCGCCCTGGCGCTGGCCCTTGTTCTGATGGTGGTTC TTTCCCTGATGGTGGCGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MQQQARLAMTAMERDLRMTGYGLSDVGNLKIRFYNKGVGTVTDNYYAVAEANVFGSPKVAVPAADTDSIAIRYCDQPSDA MPDITLSGSVPPPSSSNTPVSSTDGINANDLIIIYDPTDLAKYGSILMVTDTTSAGGLSVKHGNGAGDGPLASFYNPSNP AVNLFPPGGYPVGAKVLRLAPEALRTVRYYVDAGMNLRRQSQAGLTGAVEERPVASGIEDFQVKYYFRDGTWLDAPVTDD PDHDVDKLRAVRISIIVRTAKPDRQYGAGDSIRLTGDDGNGVARSGGGYRRMVMSTTISLRNLAVRDM
Sequences:
>Translated_308_residues MQQQARLAMTAMERDLRMTGYGLSDVGNLKIRFYNKGVGTVTDNYYAVAEANVFGSPKVAVPAADTDSIAIRYCDQPSDA MPDITLSGSVPPPSSSNTPVSSTDGINANDLIIIYDPTDLAKYGSILMVTDTTSAGGLSVKHGNGAGDGPLASFYNPSNP AVNLFPPGGYPVGAKVLRLAPEALRTVRYYVDAGMNLRRQSQAGLTGAVEERPVASGIEDFQVKYYFRDGTWLDAPVTDD PDHDVDKLRAVRISIIVRTAKPDRQYGAGDSIRLTGDDGNGVARSGGGYRRMVMSTTISLRNLAVRDM >Mature_308_residues MQQQARLAMTAMERDLRMTGYGLSDVGNLKIRFYNKGVGTVTDNYYAVAEANVFGSPKVAVPAADTDSIAIRYCDQPSDA MPDITLSGSVPPPSSSNTPVSSTDGINANDLIIIYDPTDLAKYGSILMVTDTTSAGGLSVKHGNGAGDGPLASFYNPSNP AVNLFPPGGYPVGAKVLRLAPEALRTVRYYVDAGMNLRRQSQAGLTGAVEERPVASGIEDFQVKYYFRDGTWLDAPVTDD PDHDVDKLRAVRISIIVRTAKPDRQYGAGDSIRLTGDDGNGVARSGGGYRRMVMSTTISLRNLAVRDM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32953; Mature: 32953
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQQARLAMTAMERDLRMTGYGLSDVGNLKIRFYNKGVGTVTDNYYAVAEANVFGSPKVA CCCHHHHHHHHHHHHHEEECCCCCCCCCEEEEEEECCCCEECCCEEEEEEECCCCCCCEE VPAADTDSIAIRYCDQPSDAMPDITLSGSVPPPSSSNTPVSSTDGINANDLIIIYDPTDL EECCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCH AKYGSILMVTDTTSAGGLSVKHGNGAGDGPLASFYNPSNPAVNLFPPGGYPVGAKVLRLA HHHCCEEEEEECCCCCCEEEECCCCCCCCCCEECCCCCCCEEEEECCCCCCHHHHHHHHC PEALRTVRYYVDAGMNLRRQSQAGLTGAVEERPVASGIEDFQVKYYFRDGTWLDAPVTDD HHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEECCCCCC PDHDVDKLRAVRISIIVRTAKPDRQYGAGDSIRLTGDDGNGVARSGGGYRRMVMSTTISL CCCCHHHHEEEEEEEEEEECCCCCCCCCCCEEEEECCCCCCEECCCCCEEEEEEEEHEEE RNLAVRDM HEEEECCC >Mature Secondary Structure MQQQARLAMTAMERDLRMTGYGLSDVGNLKIRFYNKGVGTVTDNYYAVAEANVFGSPKVA CCCHHHHHHHHHHHHHEEECCCCCCCCCEEEEEEECCCCEECCCEEEEEEECCCCCCCEE VPAADTDSIAIRYCDQPSDAMPDITLSGSVPPPSSSNTPVSSTDGINANDLIIIYDPTDL EECCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCH AKYGSILMVTDTTSAGGLSVKHGNGAGDGPLASFYNPSNPAVNLFPPGGYPVGAKVLRLA HHHCCEEEEEECCCCCCEEEECCCCCCCCCCEECCCCCCCEEEEECCCCCCHHHHHHHHC PEALRTVRYYVDAGMNLRRQSQAGLTGAVEERPVASGIEDFQVKYYFRDGTWLDAPVTDD HHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEECCCCCC PDHDVDKLRAVRISIIVRTAKPDRQYGAGDSIRLTGDDGNGVARSGGGYRRMVMSTTISL CCCCHHHHEEEEEEEEEEECCCCCCCCCCCEEEEECCCCCCEECCCCCEEEEEEEEHEEE RNLAVRDM HEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA