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The map label for this gene is dcrA [H]

Identifier: 39996137

GI number: 39996137

Start: 1117662

End: 1119311

Strand: Direct

Name: dcrA [H]

Synonym: GSU1035

Alternate gene names: 39996137

Gene position: 1117662-1119311 (Clockwise)

Preceding gene: 39996136

Following gene: 39996139

Centisome position: 29.3

GC content: 64.91

Gene sequence:

>1650_bases
ATGAGAATGCCTGCACGGCTGGCAGCACTGAAGTTGTCCCACAAACTGATCCTGGCCCTGGCGGTACTGAATCTGTTCGT
CATCGCCGCGGTGGCCGCCTCCAGCTACCAGGGACAGAAAACGGCGGTACAGCATGCCGTGGACGAAAAGCTGCTCGCCT
GCGCCCAGGGGGTCCGGCTTCTGGGGGATGCCTTCCATGACCGGCTCGGGCAGTCAGCTGACATCAACCAGGAAGAGTAC
GTGGCCATGCTCGACAATCTTTCGGCGTTTGCCGAAGGGGCGGGCGTCAAGTACGTCTACACCGTGGTGGTGAAGGACGG
CAAGGTTGTCTTTACCACCTCAAGCCATACCAGGGAGGAAAAGGAAAAGGGAGATATCGCCGCCCTGTACGACCCCTACG
ACGACGCGAGCAGTGCTCTCAAGGATGCCATTGCCGACGGCAAGCCCCGCTACGATACCTATTCCGACCAGTGGGGTACG
TTCCGGTCCCTGTTCCTTCCGGTTCGCTCCAGCGGCGGCGCGACGTACGTCATCGGCGTCGACGTCTCAACCGCGGACGT
GAACGCCGTCCTCCGTTCAAGCCTGATCACCACCGTTGTCATGGGCGCTGTCCTGTTCGTGGCCGGCACGCTGCTCATGC
TCCTGGTGATCAGACCCGTTTCCGCCGCAGTCCGGATGCTTGCCGAAAAGGTCAACCATGTTGCCGATGGTGATCTGAAC
GTTACCGTCGATTATGCGAGCGGTGACGAGCTCGGCATGCTGGCGGGCGACATGAACCGTATGGTTGAAAAACTCCGGGA
CATGGTTGCGGGCGTTGCGGGGGCGGCGGCCGAAGTGACCACGGCCGCCCGTCAGCTGTCGTCCACCTCAGAGGAGATGG
CGGCGGGCGTCCAGTCTGCCGCCGCGGAGGTCGTCGGCGTTTCCACGGCAGGCGAAGAGATGGCGGCCACGTCCTTCGAG
ATTTCCTTCAATTGTTCCACCGTGGCCGCGGATGCCCGTCAGGCCACTGAGTCGGCCACGGCGGGCGAGGAGGTCGTGTC
GGCCACGGTCTGCATCATGGCGAACATTGCCGCGCTGGTGCGGGATTCGGCCCGGACGGTCGAAAGCCTGGGCGCGCGGA
GCGATCAGATCGGGGAGTTGGCCGGTTCCATCGAGGATATCGCCGATCAGACCAATCTCCTGGCCCTGAACGCCGCCATC
GAGGCGGCCCGGGCAGGGGAGCAGGGGCGCGGGTTCGCCGTGGTTGCCGACGAGGTAAGGGCGCTTGCCGAACGGACGGC
CCGGGCCACCCGCGAGATCACGGCCGTGATCCGCTCCATCCAGCAGGAAACCCAGGGGGCTGTTACCGCCATGACCGCGG
GTGTTGTCGAGGTTGAGCGGGGGACGGCCGAGGCGTCCCGGTCGGGCGAGGCCCTGAGGGGCATCCTTGAACGAATCCAT
GCCGTGGAGGAGCAGGTTGTCCAGATTGCCGCGGCCGCTGACCAGCAGACCGCCACCACCACCGAGATCAGCGGCAATAT
CCTGCGGATCTCCGACGTAGTCCAGAGCACTACCCGCGGCGCCCAGGATTCGGCCGATGCCGCCGCGCACCTGCAGGGTC
TTGCCGAAGAGCTTCATGCCGCCGTGGGCCGGTTCAGGGTCGCCGGGTAG

Upstream 100 bases:

>100_bases
TCAAACGCCAGGCCGAGGAGTTGCAGCGGCTGGTGGGACAGTTCCGGCTGGCGACATAGGATGGTATGAACTGCCGGGAT
GAACGATCGGGAGGATAGGA

Downstream 100 bases:

>100_bases
CGGTCGTTCGCAGGTACTGTCGACAACGCCGGGTTACCCCGGCGTTGTCATTTCCCCCCTGCAAGGTTGTCTTCCTCTCC
GCCCAGCGTGAAGTAGAAGG

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 549; Mature: 549

Protein sequence:

>549_residues
MRMPARLAALKLSHKLILALAVLNLFVIAAVAASSYQGQKTAVQHAVDEKLLACAQGVRLLGDAFHDRLGQSADINQEEY
VAMLDNLSAFAEGAGVKYVYTVVVKDGKVVFTTSSHTREEKEKGDIAALYDPYDDASSALKDAIADGKPRYDTYSDQWGT
FRSLFLPVRSSGGATYVIGVDVSTADVNAVLRSSLITTVVMGAVLFVAGTLLMLLVIRPVSAAVRMLAEKVNHVADGDLN
VTVDYASGDELGMLAGDMNRMVEKLRDMVAGVAGAAAEVTTAARQLSSTSEEMAAGVQSAAAEVVGVSTAGEEMAATSFE
ISFNCSTVAADARQATESATAGEEVVSATVCIMANIAALVRDSARTVESLGARSDQIGELAGSIEDIADQTNLLALNAAI
EAARAGEQGRGFAVVADEVRALAERTARATREITAVIRSIQQETQGAVTAMTAGVVEVERGTAEASRSGEALRGILERIH
AVEEQVVQIAAAADQQTATTTEISGNILRISDVVQSTTRGAQDSADAAAHLQGLAEELHAAVGRFRVAG

Sequences:

>Translated_549_residues
MRMPARLAALKLSHKLILALAVLNLFVIAAVAASSYQGQKTAVQHAVDEKLLACAQGVRLLGDAFHDRLGQSADINQEEY
VAMLDNLSAFAEGAGVKYVYTVVVKDGKVVFTTSSHTREEKEKGDIAALYDPYDDASSALKDAIADGKPRYDTYSDQWGT
FRSLFLPVRSSGGATYVIGVDVSTADVNAVLRSSLITTVVMGAVLFVAGTLLMLLVIRPVSAAVRMLAEKVNHVADGDLN
VTVDYASGDELGMLAGDMNRMVEKLRDMVAGVAGAAAEVTTAARQLSSTSEEMAAGVQSAAAEVVGVSTAGEEMAATSFE
ISFNCSTVAADARQATESATAGEEVVSATVCIMANIAALVRDSARTVESLGARSDQIGELAGSIEDIADQTNLLALNAAI
EAARAGEQGRGFAVVADEVRALAERTARATREITAVIRSIQQETQGAVTAMTAGVVEVERGTAEASRSGEALRGILERIH
AVEEQVVQIAAAADQQTATTTEISGNILRISDVVQSTTRGAQDSADAAAHLQGLAEELHAAVGRFRVAG
>Mature_549_residues
MRMPARLAALKLSHKLILALAVLNLFVIAAVAASSYQGQKTAVQHAVDEKLLACAQGVRLLGDAFHDRLGQSADINQEEY
VAMLDNLSAFAEGAGVKYVYTVVVKDGKVVFTTSSHTREEKEKGDIAALYDPYDDASSALKDAIADGKPRYDTYSDQWGT
FRSLFLPVRSSGGATYVIGVDVSTADVNAVLRSSLITTVVMGAVLFVAGTLLMLLVIRPVSAAVRMLAEKVNHVADGDLN
VTVDYASGDELGMLAGDMNRMVEKLRDMVAGVAGAAAEVTTAARQLSSTSEEMAAGVQSAAAEVVGVSTAGEEMAATSFE
ISFNCSTVAADARQATESATAGEEVVSATVCIMANIAALVRDSARTVESLGARSDQIGELAGSIEDIADQTNLLALNAAI
EAARAGEQGRGFAVVADEVRALAERTARATREITAVIRSIQQETQGAVTAMTAGVVEVERGTAEASRSGEALRGILERIH
AVEEQVVQIAAAADQQTATTTEISGNILRISDVVQSTTRGAQDSADAAAHLQGLAEELHAAVGRFRVAG

Specific function: Mediates Taxis To The Sugars Ribose And Galactose VIa An Interaction With The Periplasmic Ribose- Or Galactose-Binding Proteins. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of Attractants And Repellents In The Environment, Trans

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=354, Percent_Identity=30.225988700565, Blast_Score=133, Evalue=3e-32,
Organism=Escherichia coli, GI2367378, Length=328, Percent_Identity=31.4024390243902, Blast_Score=122, Evalue=8e-29,
Organism=Escherichia coli, GI1788195, Length=267, Percent_Identity=32.2097378277154, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1789453, Length=386, Percent_Identity=26.1658031088083, Blast_Score=102, Evalue=6e-23,
Organism=Escherichia coli, GI1788194, Length=413, Percent_Identity=25.90799031477, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 57308; Mature: 57308

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMPARLAALKLSHKLILALAVLNLFVIAAVAASSYQGQKTAVQHAVDEKLLACAQGVRL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LGDAFHDRLGQSADINQEEYVAMLDNLSAFAEGAGVKYVYTVVVKDGKVVFTTSSHTREE
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCEEEEEECCCCHHH
KEKGDIAALYDPYDDASSALKDAIADGKPRYDTYSDQWGTFRSLFLPVRSSGGATYVIGV
HHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHEECCCCEEEEEEE
DVSTADVNAVLRSSLITTVVMGAVLFVAGTLLMLLVIRPVSAAVRMLAEKVNHVADGDLN
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
VTVDYASGDELGMLAGDMNRMVEKLRDMVAGVAGAAAEVTTAARQLSSTSEEMAAGVQSA
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHH
AAEVVGVSTAGEEMAATSFEISFNCSTVAADARQATESATAGEEVVSATVCIMANIAALV
HHHHHCCCCCCCHHHHEEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
RDSARTVESLGARSDQIGELAGSIEDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVR
HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCEEEEHHHHH
ALAERTARATREITAVIRSIQQETQGAVTAMTAGVVEVERGTAEASRSGEALRGILERIH
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEECCCHHHHCCCHHHHHHHHHHH
AVEEQVVQIAAAADQQTATTTEISGNILRISDVVQSTTRGAQDSADAAAHLQGLAEELHA
HHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
AVGRFRVAG
HHHHHCCCC
>Mature Secondary Structure
MRMPARLAALKLSHKLILALAVLNLFVIAAVAASSYQGQKTAVQHAVDEKLLACAQGVRL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LGDAFHDRLGQSADINQEEYVAMLDNLSAFAEGAGVKYVYTVVVKDGKVVFTTSSHTREE
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCEEEEEECCCCHHH
KEKGDIAALYDPYDDASSALKDAIADGKPRYDTYSDQWGTFRSLFLPVRSSGGATYVIGV
HHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHEECCCCEEEEEEE
DVSTADVNAVLRSSLITTVVMGAVLFVAGTLLMLLVIRPVSAAVRMLAEKVNHVADGDLN
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
VTVDYASGDELGMLAGDMNRMVEKLRDMVAGVAGAAAEVTTAARQLSSTSEEMAAGVQSA
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHH
AAEVVGVSTAGEEMAATSFEISFNCSTVAADARQATESATAGEEVVSATVCIMANIAALV
HHHHHCCCCCCCHHHHEEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
RDSARTVESLGARSDQIGELAGSIEDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVR
HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCEEEEHHHHH
ALAERTARATREITAVIRSIQQETQGAVTAMTAGVVEVERGTAEASRSGEALRGILERIH
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEECCCHHHHCCCHHHHHHHHHHH
AVEEQVVQIAAAADQQTATTTEISGNILRISDVVQSTTRGAQDSADAAAHLQGLAEELHA
HHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
AVGRFRVAG
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]