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The map label for this gene is cyd-4

Identifier: 39996127

GI number: 39996127

Start: 1104057

End: 1104335

Strand: Reverse

Name: cyd-4

Synonym: GSU1024

Alternate gene names: NA

Gene position: 1104335-1104057 (Counterclockwise)

Preceding gene: 39996128

Following gene: 39996125

Centisome position: 28.95

GC content: 60.57

Gene sequence:

>279_bases
ATGAAACGACTGATAGCAGCCGCAGCACTCACCCTGTTCTGTGCCGGCCTCGCCGTTGCCCACGACAAGGTCGTGGTCCT
GGAAGCAAAGAACGGCAACGTCACCTTCGACCACAAAAAGCACGCCGGGGTGAAGGGCGAGTGCAAGGCCTGCCACGAAA
CCGAGGCTGGGGGCAAGATCGCCGGCATGGGCAAGGACTGGGCCCACAAGACCTGTACCGGCTGTCACAAGGAAATGGGG
AAAGGCCCCACCAAGTGCGGTGAGTGCCACAAGAAGTAA

Upstream 100 bases:

>100_bases
ACCAGCCTAATAAATAAAGAAAAATGTGTGGTGCTCCTTGCAAAGCGGCCGTCTGCTCGTACAATTGGGGGCAGACTTTC
GTACTCAAAGGAGGAGCACC

Downstream 100 bases:

>100_bases
CTGCTGACTTCTGGAGGAAAAAAGAGGGGATGGCCACTGGCTATCCCCTCTTTTTTTCATCATCCCCCGAAGCGCCGGAC
AAAGACCCCGACGCCGAGCC

Product: cytochrome C3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MKRLIAAAALTLFCAGLAVAHDKVVVLEAKNGNVTFDHKKHAGVKGECKACHETEAGGKIAGMGKDWAHKTCTGCHKEMG
KGPTKCGECHKK

Sequences:

>Translated_92_residues
MKRLIAAAALTLFCAGLAVAHDKVVVLEAKNGNVTFDHKKHAGVKGECKACHETEAGGKIAGMGKDWAHKTCTGCHKEMG
KGPTKCGECHKK
>Mature_92_residues
MKRLIAAAALTLFCAGLAVAHDKVVVLEAKNGNVTFDHKKHAGVKGECKACHETEAGGKIAGMGKDWAHKTCTGCHKEMG
KGPTKCGECHKK

Specific function: May be involved in anaerobic iron respiration [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002322
- InterPro:   IPR020942 [H]

Pfam domain/function: PF02085 Cytochrom_CIII [H]

EC number: NA

Molecular weight: Translated: 9700; Mature: 9700

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
10.9 %Cys+Met (Translated Protein)
7.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
10.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLIAAAALTLFCAGLAVAHDKVVVLEAKNGNVTFDHKKHAGVKGECKACHETEAGGKI
CCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCEE
AGMGKDWAHKTCTGCHKEMGKGPTKCGECHKK
ECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKRLIAAAALTLFCAGLAVAHDKVVVLEAKNGNVTFDHKKHAGVKGECKACHETEAGGKI
CCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCEE
AGMGKDWAHKTCTGCHKEMGKGPTKCGECHKK
ECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA