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The map label for this gene is 39996031

Identifier: 39996031

GI number: 39996031

Start: 997428

End: 998864

Strand: Direct

Name: 39996031

Synonym: GSU0928

Alternate gene names: NA

Gene position: 997428-998864 (Clockwise)

Preceding gene: 39996030

Following gene: 39996032

Centisome position: 26.15

GC content: 63.88

Gene sequence:

>1437_bases
ATGACCATTACGCAACGTTTCGCCCTGTTCTTAGCATTTCTGGTACTCGTACCCCTTGCCGCCCTGGGCGCCGAGGCGCC
CAAAACAGCAAAGGCCGACCCCCGCACCATGACCTTCCCGCAGCCGGCCTTCGAGGTCCCCCGGACCGAGCGGGCGGTGC
TGAAAAACGGCATGGTCGTCCACATGCTCCCGGACCGGGAGCTGCCCGTGGTGAGCCTCACGGCCTACGTGAACGTGGGG
AGCATCTATGAGCCGGCCGACAAGGCGGGCCTTGCCGGGCTCACCGGTGCGGTCATGCGGAGCGGCGGCACCAGGGATAT
GGCCCCCGAGGCCCTGGACGCGGAGCTTGAGTTCATGGCCTCCTCGGTGGAGGGGGGTATCGGCAGCGATGCGGGGAATG
TCTCCCTGGCGTCCCTGTCCCGCAACCTTCCCCGGACCCTGGAACTGTTCGCCCGGGTGATGATGAACCCGGCCTTCCGG
GAAGACCGGGTTACCCTGGCAAAGAACCGGACCATCGAGGCCATCCGCCGCCAGAATGACGATTCCAAGGGAATCGCCGA
CCGTGAACTCCAGAAGGCCCTCTATCCCGGCCACCCCCTGGGGCGCTTCCCTACGGTGGCCACGGTCCAGTCCATCACCC
GCGACGATCTGGCGGCGTTTCACGACCGCTATTTCCGCCCCGGTAATGTTGTCATCGCCGCTGCCGGCGACTTTGACCCC
AAGGAACTGGTGAAGCTCCTGGAAAAGGCCTTTGCAGGCTGGAAGGAAGAGAAGGTCGATTTCCCGCCCGTGGCCGAACC
GTCCCGGGAGATGAAGCCCGCCGTGCTCCTGGCGCGCAAGGAGGTGAACCAGTCGGCCATCCGCATGGGGCACCTGGGGA
TCGACAAGAACAACCCGGATCTCTACGCCATCAGGGTCATGGACTACATCCTGGGGGGCGGCTTCACCTCGCGCCTCACC
ACCGAGATCCGCTCCAACCAGGGGCTGGCCTACAACGTGGGTGCGTCCTTCGACGTGGGGCGCCGCTTCGTGGGCACCTT
CGAGGCCGAGACCGAGACCAAGAGCGGATCCACTGCCAAGGCCATCGGCCTCATGCGGGACATCATCGACGGCATGCGCA
AGGAACCGGTGACCGACCAGGAGCTGAACCTGGCCAAGGAGGCGATCATCAACTCCTTCATCTTCGGTTTCGCCCGTCCC
GACTTCATAGCCAACCAGCGGGCCCGGCTCGAATTCTACGGCTATCCCGACGGCTATCTGGAAAACTACCGGGCCAATAT
CGCCCGGGTCACCAAGGAGGATGTCCTCCGCGCGGCGCGGACCTACCTGCACCCTGATCGACTGATCATTCTCGTGGTTG
GTGAAGACAAGACATTCGACAAACCCCTCTCCACCTTCGGCACGGTTCAGGAGATCAAGCTGGAGAACGGGAAGTAA

Upstream 100 bases:

>100_bases
AAGTATTTCGTCCGCGAGAACCGGACCGTGGGGGTCATCACGAAGAAAGAAGACGTAAAGTAGCGGCACAGCCAACCTTA
TCGCGAACGAGGACGCACGA

Downstream 100 bases:

>100_bases
GAAAGGAGACAACTGTATGGCAACCTGGAAGTGCGGAACCTGCGGCTTCACCAAAGAGGGGCGCTGCAAGCCCCAGAAGT
GTCCCCAGTGTCAGGAAAAG

Product: M16 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 478; Mature: 477

Protein sequence:

>478_residues
MTITQRFALFLAFLVLVPLAALGAEAPKTAKADPRTMTFPQPAFEVPRTERAVLKNGMVVHMLPDRELPVVSLTAYVNVG
SIYEPADKAGLAGLTGAVMRSGGTRDMAPEALDAELEFMASSVEGGIGSDAGNVSLASLSRNLPRTLELFARVMMNPAFR
EDRVTLAKNRTIEAIRRQNDDSKGIADRELQKALYPGHPLGRFPTVATVQSITRDDLAAFHDRYFRPGNVVIAAAGDFDP
KELVKLLEKAFAGWKEEKVDFPPVAEPSREMKPAVLLARKEVNQSAIRMGHLGIDKNNPDLYAIRVMDYILGGGFTSRLT
TEIRSNQGLAYNVGASFDVGRRFVGTFEAETETKSGSTAKAIGLMRDIIDGMRKEPVTDQELNLAKEAIINSFIFGFARP
DFIANQRARLEFYGYPDGYLENYRANIARVTKEDVLRAARTYLHPDRLIILVVGEDKTFDKPLSTFGTVQEIKLENGK

Sequences:

>Translated_478_residues
MTITQRFALFLAFLVLVPLAALGAEAPKTAKADPRTMTFPQPAFEVPRTERAVLKNGMVVHMLPDRELPVVSLTAYVNVG
SIYEPADKAGLAGLTGAVMRSGGTRDMAPEALDAELEFMASSVEGGIGSDAGNVSLASLSRNLPRTLELFARVMMNPAFR
EDRVTLAKNRTIEAIRRQNDDSKGIADRELQKALYPGHPLGRFPTVATVQSITRDDLAAFHDRYFRPGNVVIAAAGDFDP
KELVKLLEKAFAGWKEEKVDFPPVAEPSREMKPAVLLARKEVNQSAIRMGHLGIDKNNPDLYAIRVMDYILGGGFTSRLT
TEIRSNQGLAYNVGASFDVGRRFVGTFEAETETKSGSTAKAIGLMRDIIDGMRKEPVTDQELNLAKEAIINSFIFGFARP
DFIANQRARLEFYGYPDGYLENYRANIARVTKEDVLRAARTYLHPDRLIILVVGEDKTFDKPLSTFGTVQEIKLENGK
>Mature_477_residues
TITQRFALFLAFLVLVPLAALGAEAPKTAKADPRTMTFPQPAFEVPRTERAVLKNGMVVHMLPDRELPVVSLTAYVNVGS
IYEPADKAGLAGLTGAVMRSGGTRDMAPEALDAELEFMASSVEGGIGSDAGNVSLASLSRNLPRTLELFARVMMNPAFRE
DRVTLAKNRTIEAIRRQNDDSKGIADRELQKALYPGHPLGRFPTVATVQSITRDDLAAFHDRYFRPGNVVIAAAGDFDPK
ELVKLLEKAFAGWKEEKVDFPPVAEPSREMKPAVLLARKEVNQSAIRMGHLGIDKNNPDLYAIRVMDYILGGGFTSRLTT
EIRSNQGLAYNVGASFDVGRRFVGTFEAETETKSGSTAKAIGLMRDIIDGMRKEPVTDQELNLAKEAIINSFIFGFARPD
FIANQRARLEFYGYPDGYLENYRANIARVTKEDVLRAARTYLHPDRLIILVVGEDKTFDKPLSTFGTVQEIKLENGK

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

Organism=Homo sapiens, GI46593007, Length=282, Percent_Identity=22.3404255319149, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR007863 [H]

Pfam domain/function: PF05193 Peptidase_M16_C [H]

EC number: NA

Molecular weight: Translated: 52689; Mature: 52558

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTITQRFALFLAFLVLVPLAALGAEAPKTAKADPRTMTFPQPAFEVPRTERAVLKNGMVV
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCHHCCCCHHHHHHHCCCEE
HMLPDRELPVVSLTAYVNVGSIYEPADKAGLAGLTGAVMRSGGTRDMAPEALDAELEFMA
EECCCCCCCEEEEEEEEECCCCCCCHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHH
SSVEGGIGSDAGNVSLASLSRNLPRTLELFARVMMNPAFREDRVTLAKNRTIEAIRRQND
HHHCCCCCCCCCCEEHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEHHHCHHHHHHHHCCC
DSKGIADRELQKALYPGHPLGRFPTVATVQSITRDDLAAFHDRYFRPGNVVIAAAGDFDP
CCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCH
KELVKLLEKAFAGWKEEKVDFPPVAEPSREMKPAVLLARKEVNQSAIRMGHLGIDKNNPD
HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
LYAIRVMDYILGGGFTSRLTTEIRSNQGLAYNVGASFDVGRRFVGTFEAETETKSGSTAK
EEEHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCHHCHHHHCCCCCCCCCCCCCHHH
AIGLMRDIIDGMRKEPVTDQELNLAKEAIINSFIFGFARPDFIANQRARLEFYGYPDGYL
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCEEEEECCCCHHH
ENYRANIARVTKEDVLRAARTYLHPDRLIILVVGEDKTFDKPLSTFGTVQEIKLENGK
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHCCEEEEEECCCC
>Mature Secondary Structure 
TITQRFALFLAFLVLVPLAALGAEAPKTAKADPRTMTFPQPAFEVPRTERAVLKNGMVV
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCHHCCCCHHHHHHHCCCEE
HMLPDRELPVVSLTAYVNVGSIYEPADKAGLAGLTGAVMRSGGTRDMAPEALDAELEFMA
EECCCCCCCEEEEEEEEECCCCCCCHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHH
SSVEGGIGSDAGNVSLASLSRNLPRTLELFARVMMNPAFREDRVTLAKNRTIEAIRRQND
HHHCCCCCCCCCCEEHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEHHHCHHHHHHHHCCC
DSKGIADRELQKALYPGHPLGRFPTVATVQSITRDDLAAFHDRYFRPGNVVIAAAGDFDP
CCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCH
KELVKLLEKAFAGWKEEKVDFPPVAEPSREMKPAVLLARKEVNQSAIRMGHLGIDKNNPD
HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
LYAIRVMDYILGGGFTSRLTTEIRSNQGLAYNVGASFDVGRRFVGTFEAETETKSGSTAK
EEEHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCHHCHHHHCCCCCCCCCCCCCHHH
AIGLMRDIIDGMRKEPVTDQELNLAKEAIINSFIFGFARPDFIANQRARLEFYGYPDGYL
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCEEEEECCCCHHH
ENYRANIARVTKEDVLRAARTYLHPDRLIILVVGEDKTFDKPLSTFGTVQEIKLENGK
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]