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The map label for this gene is yrbE [C]

Identifier: 39996027

GI number: 39996027

Start: 993208

End: 993978

Strand: Direct

Name: yrbE [C]

Synonym: GSU0924

Alternate gene names: 39996027

Gene position: 993208-993978 (Clockwise)

Preceding gene: 308513292

Following gene: 39996028

Centisome position: 26.04

GC content: 62.39

Gene sequence:

>771_bases
ATGCCATTGACCTCCATTGAACACACCGTCAAAAGCTTCCTCGCCGAATTCCAGGCGTTCTGCGTCCTGTCGCTCAGGGC
CGTGGTGCGCATCTTCCGCCGCCCCGGCTACTACCGGGAATTCGTCATCCAGTTCGACAAGATGGGCGTCGGCTCCCTCT
TCATCATCTGCCTCACGGGACTGTTCACCGGCATGGTCATGGCGCTCCAGGCCCTGATCCAGCTCAAGCCCTTCGCCGCC
ACCAGCTACGTGGGGGGGATGGTGGCGGTAACCATGGTAAAGGAGCTGGGGCCGGTCCTCTCGTCCCTCATGGTCGCGGG
CCGGGTCGGCTCGTCCATCACCGCCGAGCTGGGCACCATGGTGGTGACCGAGCAGGTGGACGCCATGCGGGTGGAGGGGA
CCGACATCGTCAGCCGGCTGGTCACCTCCCGCCTCAAGGCACTGATGCTGGCCATGCCCATGCTCGCCCTGGTCACCGAC
GCGGTGGCCCTGCTGGGCGGGTACATCATTGCGGCGGGGTATGACATCAACCTCCTCATGTACTGGAAGTCACTGCCCCA
GTTCATGGTGTTCCAGGACCTCATCGAGGGGGTGATGAAACCCTTTGTCTTCGGTACGCTCATCGCGCTCATCGGCTGTT
ACGTGGGGCTTTCCACCAGCGGCGGCGCCGAGGGGGTGGGGACGTCGGCCAAGCGGGCAGTGGTTCTCTCATCGGTCATG
GTGTTGGTGGCCGATTTTTTCATGACCAAGATATTTATTGTGTTCCGGTGA

Upstream 100 bases:

>100_bases
GAACCTTGAGGATATCCCCGACGACGTGAAGAACGAGCTTACCTTCATCTTTGTGGATGACGTGCATGAGGCGGTGGCTG
CCGCGCTCCAGTGACAACCG

Downstream 100 bases:

>100_bases
GGGCGACGACGTGAGCGGCGGCGAACAGGGCATCAGGATGGACAAGGTTTCCTACTCCGTGGGCGGGCGGACGATCCTCA
CGGAGTTCGACCTGTTTCTC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MPLTSIEHTVKSFLAEFQAFCVLSLRAVVRIFRRPGYYREFVIQFDKMGVGSLFIICLTGLFTGMVMALQALIQLKPFAA
TSYVGGMVAVTMVKELGPVLSSLMVAGRVGSSITAELGTMVVTEQVDAMRVEGTDIVSRLVTSRLKALMLAMPMLALVTD
AVALLGGYIIAAGYDINLLMYWKSLPQFMVFQDLIEGVMKPFVFGTLIALIGCYVGLSTSGGAEGVGTSAKRAVVLSSVM
VLVADFFMTKIFIVFR

Sequences:

>Translated_256_residues
MPLTSIEHTVKSFLAEFQAFCVLSLRAVVRIFRRPGYYREFVIQFDKMGVGSLFIICLTGLFTGMVMALQALIQLKPFAA
TSYVGGMVAVTMVKELGPVLSSLMVAGRVGSSITAELGTMVVTEQVDAMRVEGTDIVSRLVTSRLKALMLAMPMLALVTD
AVALLGGYIIAAGYDINLLMYWKSLPQFMVFQDLIEGVMKPFVFGTLIALIGCYVGLSTSGGAEGVGTSAKRAVVLSSVM
VLVADFFMTKIFIVFR
>Mature_255_residues
PLTSIEHTVKSFLAEFQAFCVLSLRAVVRIFRRPGYYREFVIQFDKMGVGSLFIICLTGLFTGMVMALQALIQLKPFAAT
SYVGGMVAVTMVKELGPVLSSLMVAGRVGSSITAELGTMVVTEQVDAMRVEGTDIVSRLVTSRLKALMLAMPMLALVTDA
VALLGGYIIAAGYDINLLMYWKSLPQFMVFQDLIEGVMKPFVFGTLIALIGCYVGLSTSGGAEGVGTSAKRAVVLSSVMV
LVADFFMTKIFIVFR

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=223, Percent_Identity=31.390134529148, Blast_Score=121, Evalue=5e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 27691; Mature: 27560

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PLTSIEHTVKSFLAEFQAFCVLSLRAVVRIFRRPGYYREFVIQFDKMGVGSLFIICLTG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHH
LFTGMVMALQALIQLKPFAATSYVGGMVAVTMVKELGPVLSSLMVAGRVGSSITAELGTM
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
VVTEQVDAMRVEGTDIVSRLVTSRLKALMLAMPMLALVTDAVALLGGYIIAAGYDINLLM
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHH
YWKSLPQFMVFQDLIEGVMKPFVFGTLIALIGCYVGLSTSGGAEGVGTSAKRAVVLSSVM
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
VLVADFFMTKIFIVFR
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA