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The map label for this gene is yfbS [H]

Identifier: 39995950

GI number: 39995950

Start: 902932

End: 904782

Strand: Reverse

Name: yfbS [H]

Synonym: GSU0844

Alternate gene names: 39995950

Gene position: 904782-902932 (Counterclockwise)

Preceding gene: 39995951

Following gene: 39995949

Centisome position: 23.72

GC content: 58.83

Gene sequence:

>1851_bases
GTGATCGTTACCGTAACCATACTGGCACTGGCATCCCTCTTGTTCATCTCCGGGATCATCCGCCCGGATCTCGTTGCCGT
CAGTGCGTTGATTCTTCTCATGCTCTTCGGCATCCTGACGCCGGACGAGGCGTTGTCCGGCTTCTCCAGCCCGATTGTCA
TGATGATGATCGGCCTGTTCGTCGTGGGTGGCGGCATATTTCAGACCGGCCTGGCAAAGCAGGTGAGCAGGAGGCTGCTG
AAGCTGGCCGGGACGAATGAGACGACTCTGCTGATCATGGTGATGGTTGTGACGGCGGCATTCGGCACCACGGTAAGCAA
CACGGGCACGGTGGCGGTGTTGATGCCCATCGTGGTCAGCCTGGCCACGAGCGCCCGCATCAACCCGGGCAGACTGCTGA
TGCCGCTGGCCTTTGCCAGCAGTTTTGGCGGCACCCTGACACTCATCGGGACACCGCCCAACCTGGTGATTCAGGAGACG
CTCGTCAGCGCGGGATACGGGAAGCTGTCCTTCTTTTCATTCACGCCGATCGGGCTGGTCGGGTTCATGGTCGGGCTTGT
CAGCCTGCTCTTCCTGCGCCGGTTCCTGCCGAGGAATGAGACGGGGAAGAAGACGCGCAGCGGGCGCTCGCCCGGCGAGC
TCGCCCGGAAGTATCAGCTCTCGGACAACCTGTTCCGGGCAAAGGTGGGAGCAACATCCTCCGTTGCATCGAGAACTCTG
AGTGAATTGAATATCTCGGCCCGGTTTGAAGTGAATATCATCGAGATCCGGCGCAAAACATCAGCAAGGAATCAATTCCT
CAAGACGATCGACCAAGAGATTGCCGGACCGGCTACGGTGCTTGAGGAAGGGGACATCCTGTATATCCACGGCACATTCG
ATCAGGTGCGGCGGGTTACGAAGGAGTATGGCCTGATCCTGCTGGATCACCAGGTTCCCGAGGACAGACAGCCGGCCGGC
GCTGAGCAGTACGCGACCGCGAAGATCGGCATCGCCGAGGTCATGCTGACTCCCGGCTCGAACCTGATCGGCAAGCTGGT
CGAGCAATCCGGGTTTCGCGAGAAATACCGGGTAAACATCCTGGGCATCCAGAGAAAGGACCGCCTGCTGCTGCATAACC
TGAAGGGAGAGAAGATGCTCTTCGGTGACGCCCTGCTTGTCCAGGGCACCTGGAAGGACATCGCCCTGCTTTCCGCCGAG
CAGGCCGATTACGTTGTCATAGGTCAGCCGGCCGAAGAGTCGCGCAGGGTTACCATGGACAACAAAGCGCCCATTGCCGC
GGGAATCATGCTGCTGATGGTGGTCCTGCTGGTCACCGAGCTTATTCCGGCGGTTGTCTCGGTCATGATTGCAGCGGTGC
TGATGGTGCTGCTGGGCTGCGTTCGCACCATGGAGGACGCATACAAAACCATCAATTGGGAGAGCATTATCCTGATCGGC
GGCATGCTTCCGATGTCGACCGCCATCGCGAAGACCGGCGCCGCCGAACTTCTGTCGAACAGCCTGGCAAGCTCCCTGGG
CAGTTATGGGCCGGTCGTGCTGCTTGCGGGAGTTTATGTCACGACATCCGTGTTAACATTATTCATCAGCAATACGGCAT
GTGCGGTGCTGCTCGCCCCGATCGCACTGAACGCAGCGGCACAGCTCGGCGTCAGTCCCTACCCGTTTATGTTCGCTGTC
TCGATTGGAGCCAGCATGTGCTTTGCATCGCCATTTTCGACGCCTCCCAATGCGCTCGTCATGTCGGCCGGCCGCTATAC
ATTCGGTGACTATATAAAGGTAGGGCTGCCCCTTCAGGTTGTCATGGGGATAGTGATGGTTTTGGTTCTGCCGCTTTTTT
TCCCGTTTTGA

Upstream 100 bases:

>100_bases
GCTATACCCTGAAAACCTACCGGGTCGAGGTGGTTGGCGACGATATCATGATCGGCACGGCAACCGAATCCGACTGAACG
ATTGAGATGGGGCCGAGATC

Downstream 100 bases:

>100_bases
GACGGCTGGAGAAAGCCGGACAAATCAGCTCAACCCCGTGGAGGTGATCAGATGAAAACGGTAATTATTGGCGGAGTAGC
CGGCGGGTTGTCCGCCGCCA

Product: Trk family potassium uptake protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 616; Mature: 616

Protein sequence:

>616_residues
MIVTVTILALASLLFISGIIRPDLVAVSALILLMLFGILTPDEALSGFSSPIVMMMIGLFVVGGGIFQTGLAKQVSRRLL
KLAGTNETTLLIMVMVVTAAFGTTVSNTGTVAVLMPIVVSLATSARINPGRLLMPLAFASSFGGTLTLIGTPPNLVIQET
LVSAGYGKLSFFSFTPIGLVGFMVGLVSLLFLRRFLPRNETGKKTRSGRSPGELARKYQLSDNLFRAKVGATSSVASRTL
SELNISARFEVNIIEIRRKTSARNQFLKTIDQEIAGPATVLEEGDILYIHGTFDQVRRVTKEYGLILLDHQVPEDRQPAG
AEQYATAKIGIAEVMLTPGSNLIGKLVEQSGFREKYRVNILGIQRKDRLLLHNLKGEKMLFGDALLVQGTWKDIALLSAE
QADYVVIGQPAEESRRVTMDNKAPIAAGIMLLMVVLLVTELIPAVVSVMIAAVLMVLLGCVRTMEDAYKTINWESIILIG
GMLPMSTAIAKTGAAELLSNSLASSLGSYGPVVLLAGVYVTTSVLTLFISNTACAVLLAPIALNAAAQLGVSPYPFMFAV
SIGASMCFASPFSTPPNALVMSAGRYTFGDYIKVGLPLQVVMGIVMVLVLPLFFPF

Sequences:

>Translated_616_residues
MIVTVTILALASLLFISGIIRPDLVAVSALILLMLFGILTPDEALSGFSSPIVMMMIGLFVVGGGIFQTGLAKQVSRRLL
KLAGTNETTLLIMVMVVTAAFGTTVSNTGTVAVLMPIVVSLATSARINPGRLLMPLAFASSFGGTLTLIGTPPNLVIQET
LVSAGYGKLSFFSFTPIGLVGFMVGLVSLLFLRRFLPRNETGKKTRSGRSPGELARKYQLSDNLFRAKVGATSSVASRTL
SELNISARFEVNIIEIRRKTSARNQFLKTIDQEIAGPATVLEEGDILYIHGTFDQVRRVTKEYGLILLDHQVPEDRQPAG
AEQYATAKIGIAEVMLTPGSNLIGKLVEQSGFREKYRVNILGIQRKDRLLLHNLKGEKMLFGDALLVQGTWKDIALLSAE
QADYVVIGQPAEESRRVTMDNKAPIAAGIMLLMVVLLVTELIPAVVSVMIAAVLMVLLGCVRTMEDAYKTINWESIILIG
GMLPMSTAIAKTGAAELLSNSLASSLGSYGPVVLLAGVYVTTSVLTLFISNTACAVLLAPIALNAAAQLGVSPYPFMFAV
SIGASMCFASPFSTPPNALVMSAGRYTFGDYIKVGLPLQVVMGIVMVLVLPLFFPF
>Mature_616_residues
MIVTVTILALASLLFISGIIRPDLVAVSALILLMLFGILTPDEALSGFSSPIVMMMIGLFVVGGGIFQTGLAKQVSRRLL
KLAGTNETTLLIMVMVVTAAFGTTVSNTGTVAVLMPIVVSLATSARINPGRLLMPLAFASSFGGTLTLIGTPPNLVIQET
LVSAGYGKLSFFSFTPIGLVGFMVGLVSLLFLRRFLPRNETGKKTRSGRSPGELARKYQLSDNLFRAKVGATSSVASRTL
SELNISARFEVNIIEIRRKTSARNQFLKTIDQEIAGPATVLEEGDILYIHGTFDQVRRVTKEYGLILLDHQVPEDRQPAG
AEQYATAKIGIAEVMLTPGSNLIGKLVEQSGFREKYRVNILGIQRKDRLLLHNLKGEKMLFGDALLVQGTWKDIALLSAE
QADYVVIGQPAEESRRVTMDNKAPIAAGIMLLMVVLLVTELIPAVVSVMIAAVLMVLLGCVRTMEDAYKTINWESIILIG
GMLPMSTAIAKTGAAELLSNSLASSLGSYGPVVLLAGVYVTTSVLTLFISNTACAVLLAPIALNAAAQLGVSPYPFMFAV
SIGASMCFASPFSTPPNALVMSAGRYTFGDYIKVGLPLQVVMGIVMVLVLPLFFPF

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Homo sapiens, GI31795546, Length=149, Percent_Identity=33.5570469798658, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI301069353, Length=145, Percent_Identity=28.9655172413793, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI31377715, Length=145, Percent_Identity=28.9655172413793, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI301069349, Length=145, Percent_Identity=28.9655172413793, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI301069346, Length=145, Percent_Identity=28.9655172413793, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI58761541, Length=145, Percent_Identity=28.9655172413793, Blast_Score=67, Evalue=5e-11,
Organism=Escherichia coli, GI1788629, Length=621, Percent_Identity=37.8421900161031, Blast_Score=391, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004680
- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF03600 CitMHS; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 65889; Mature: 65889

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVTVTILALASLLFISGIIRPDLVAVSALILLMLFGILTPDEALSGFSSPIVMMMIGLF
CEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHH
VVGGGIFQTGLAKQVSRRLLKLAGTNETTLLIMVMVVTAAFGTTVSNTGTVAVLMPIVVS
HHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
LATSARINPGRLLMPLAFASSFGGTLTLIGTPPNLVIQETLVSAGYGKLSFFSFTPIGLV
HHHCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCEEEEECCHHHHH
GFMVGLVSLLFLRRFLPRNETGKKTRSGRSPGELARKYQLSDNLFRAKVGATSSVASRTL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCHHHHHHHH
SELNISARFEVNIIEIRRKTSARNQFLKTIDQEIAGPATVLEEGDILYIHGTFDQVRRVT
HHCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCHHEECCCCEEEEECCHHHHHHHH
KEYGLILLDHQVPEDRQPAGAEQYATAKIGIAEVMLTPGSNLIGKLVEQSGFREKYRVNI
HHHCEEEEECCCCCCCCCCCCHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCEEEEEE
LGIQRKDRLLLHNLKGEKMLFGDALLVQGTWKDIALLSAEQADYVVIGQPAEESRRVTMD
EEECCCCHHHHCCCCCCEEEECCEEEEECCCHHHHEEECCCCCEEEEECCCCCCCCEECC
NKAPIAAGIMLLMVVLLVTELIPAVVSVMIAAVLMVLLGCVRTMEDAYKTINWESIILIG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
GMLPMSTAIAKTGAAELLSNSLASSLGSYGPVVLLAGVYVTTSVLTLFISNTACAVLLAP
CCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
IALNAAAQLGVSPYPFMFAVSIGASMCFASPFSTPPNALVMSAGRYTFGDYIKVGLPLQV
HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCEEECCCHHH
VMGIVMVLVLPLFFPF
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIVTVTILALASLLFISGIIRPDLVAVSALILLMLFGILTPDEALSGFSSPIVMMMIGLF
CEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHH
VVGGGIFQTGLAKQVSRRLLKLAGTNETTLLIMVMVVTAAFGTTVSNTGTVAVLMPIVVS
HHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
LATSARINPGRLLMPLAFASSFGGTLTLIGTPPNLVIQETLVSAGYGKLSFFSFTPIGLV
HHHCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCEEEEECCHHHHH
GFMVGLVSLLFLRRFLPRNETGKKTRSGRSPGELARKYQLSDNLFRAKVGATSSVASRTL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCHHHHHHHH
SELNISARFEVNIIEIRRKTSARNQFLKTIDQEIAGPATVLEEGDILYIHGTFDQVRRVT
HHCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCHHEECCCCEEEEECCHHHHHHHH
KEYGLILLDHQVPEDRQPAGAEQYATAKIGIAEVMLTPGSNLIGKLVEQSGFREKYRVNI
HHHCEEEEECCCCCCCCCCCCHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCEEEEEE
LGIQRKDRLLLHNLKGEKMLFGDALLVQGTWKDIALLSAEQADYVVIGQPAEESRRVTMD
EEECCCCHHHHCCCCCCEEEECCEEEEECCCHHHHEEECCCCCEEEEECCCCCCCCEECC
NKAPIAAGIMLLMVVLLVTELIPAVVSVMIAAVLMVLLGCVRTMEDAYKTINWESIILIG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
GMLPMSTAIAKTGAAELLSNSLASSLGSYGPVVLLAGVYVTTSVLTLFISNTACAVLLAP
CCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
IALNAAAQLGVSPYPFMFAVSIGASMCFASPFSTPPNALVMSAGRYTFGDYIKVGLPLQV
HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCEEECCCHHH
VMGIVMVLVLPLFFPF
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]