Click here to switch to the map view.

The map label for this gene is ydfK [H]

Identifier: 39995864

GI number: 39995864

Start: 808948

End: 809634

Strand: Direct

Name: ydfK [H]

Synonym: GSU0758

Alternate gene names: 39995864

Gene position: 808948-809634 (Clockwise)

Preceding gene: 39995862

Following gene: 39995866

Centisome position: 21.21

GC content: 69.43

Gene sequence:

>687_bases
ATGATTCTCACCGGAACCATCGCCAACGTCGCCACCATCTGCGCCGGCGCCCTCATCGGCCGCTATGCCGGCCGCTTCGT
CCCTGCCCGGACGCGCCGGACGGTCATGGCGGGGCTGGGGTTGACCGTCCTCTTGATCGGCCTGCAGCTGGCGCTCAAGA
GCCGCCAGCCGCTCCTGGTGATCGGCGGGCTGATCATCGGCGGCATCCTCGGCGAGATGCTCCAGATCGAGGCCCGGCTG
GAGGACTTCGGCCGCTGGCTCCAGGCGCGCTTCTCCAGCGCCGGCAACATCGCCGAGGGGTTCGTCTCCGCGAGCCTGCT
CTACTGCGTCGGCGCCATGGCCATCATGGGCTCGCTCCAGGACGGCCTCGGCGACAAGCCCTCCATCCTCTACGCCAAGG
CCGCCCTTGACGGCGTCGCCTCCATTGCCCTGGCCTCCACCCTCGGCATCGGCGTCCTGTTCGCCGCGCTGCCCGTGGCC
CTCTACCAGGGCGGAATCACCCTGGCCGCCGACGTGGCCAGGGGGGTGCTGACCGAACCGGTCATCGTGGAGATGAACGC
CGCCGGCGGCCTGCTGATCGTGGCCATTGCCCTCGACATGATGGAGTTGAAGAGAATCCCGGTCGGCAACCTGCTGCCGT
CGGTCTTCGTGGTGGTGGGGCTGGCGTGGGCCTTCGGGCTGGCGTGA

Upstream 100 bases:

>100_bases
CCGCCCTGTTCTCGCATGGCGCGGCCGCGGTATTTTTCATTGCCAGTTTCCGGCTGCCATGCTATCACGGCGGCACTTCC
CCGCAAGGAGCGCCACGCCC

Downstream 100 bases:

>100_bases
GGCGGCGCGTCAGGCCGCTCAAAACGTTAAATAAGCAAGCGGGTTATTAAACGTTTTGGCCCGGATGGAAGGCTGCCGGG
CCCCTTGTGTCCGGCTGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MILTGTIANVATICAGALIGRYAGRFVPARTRRTVMAGLGLTVLLIGLQLALKSRQPLLVIGGLIIGGILGEMLQIEARL
EDFGRWLQARFSSAGNIAEGFVSASLLYCVGAMAIMGSLQDGLGDKPSILYAKAALDGVASIALASTLGIGVLFAALPVA
LYQGGITLAADVARGVLTEPVIVEMNAAGGLLIVAIALDMMELKRIPVGNLLPSVFVVVGLAWAFGLA

Sequences:

>Translated_228_residues
MILTGTIANVATICAGALIGRYAGRFVPARTRRTVMAGLGLTVLLIGLQLALKSRQPLLVIGGLIIGGILGEMLQIEARL
EDFGRWLQARFSSAGNIAEGFVSASLLYCVGAMAIMGSLQDGLGDKPSILYAKAALDGVASIALASTLGIGVLFAALPVA
LYQGGITLAADVARGVLTEPVIVEMNAAGGLLIVAIALDMMELKRIPVGNLLPSVFVVVGLAWAFGLA
>Mature_228_residues
MILTGTIANVATICAGALIGRYAGRFVPARTRRTVMAGLGLTVLLIGLQLALKSRQPLLVIGGLIIGGILGEMLQIEARL
EDFGRWLQARFSSAGNIAEGFVSASLLYCVGAMAIMGSLQDGLGDKPSILYAKAALDGVASIALASTLGIGVLFAALPVA
LYQGGITLAADVARGVLTEPVIVEMNAAGGLLIVAIALDMMELKRIPVGNLLPSVFVVVGLAWAFGLA

Specific function: Unknown

COG id: COG1811

COG function: function code R; Uncharacterized membrane protein, possible Na+ channel or pump

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789338, Length=192, Percent_Identity=28.6458333333333, Blast_Score=60, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007563 [H]

Pfam domain/function: PF04474 DUF554 [H]

EC number: NA

Molecular weight: Translated: 23401; Mature: 23401

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILTGTIANVATICAGALIGRYAGRFVPARTRRTVMAGLGLTVLLIGLQLALKSRQPLLV
CEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
IGGLIIGGILGEMLQIEARLEDFGRWLQARFSSAGNIAEGFVSASLLYCVGAMAIMGSLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
DGLGDKPSILYAKAALDGVASIALASTLGIGVLFAALPVALYQGGITLAADVARGVLTEP
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
VIVEMNAAGGLLIVAIALDMMELKRIPVGNLLPSVFVVVGLAWAFGLA
EEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MILTGTIANVATICAGALIGRYAGRFVPARTRRTVMAGLGLTVLLIGLQLALKSRQPLLV
CEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
IGGLIIGGILGEMLQIEARLEDFGRWLQARFSSAGNIAEGFVSASLLYCVGAMAIMGSLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
DGLGDKPSILYAKAALDGVASIALASTLGIGVLFAALPVALYQGGITLAADVARGVLTEP
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
VIVEMNAAGGLLIVAIALDMMELKRIPVGNLLPSVFVVVGLAWAFGLA
EEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]