| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995857
Identifier: 39995857
GI number: 39995857
Start: 795285
End: 795824
Strand: Direct
Name: 39995857
Synonym: GSU0751
Alternate gene names: NA
Gene position: 795285-795824 (Clockwise)
Preceding gene: 308513287
Following gene: 39995861
Centisome position: 20.85
GC content: 63.7
Gene sequence:
>540_bases ATGGCGGATCAGGCGGTGCTGCAGAAGCTGTTTCAGGACGGAGGGGCGCGAGATTATCGCTGGATCGACCCCGAGGAGAT CGTGGTCGGCCAGTGGGTGCGGATGAAGTGCATGTTCGGCTGCAGCGACTACGGACGGAACGCGTCCTGCCCGCCCAACA CCCCTCCGGTGGGCGAATGCCGCGACTTTTTCCGCGAGTACCGACTCGGCGCGATCTTTCGTTTCACCAAGCAGCTCGAT GACCCGGAGGAACGGCACGGCTGGTCGCGGGAGCTGAATCAGAAGCTGCTGGAGCTGGAGCGGGCGGTTTTCCTCGCCGG CTACCCCAAGGCCTTTCTCATGTTCATGGACAACTGCAAGCTCTGCCGGGAATGCGCCCGCACCCGGGCCGGTTGCCGCA ACCTGAAGCACGCCCGTCCCTCGGCCGAGGCGATGGGGGTCGACGTCTTCGCCACGGTCGCCAAGTTCGACTACCCGATC GACGTGCTCGGCAGATATACCGACGAAATGAACCGCTACGCCTTCCTGCTGATCGAGTAG
Upstream 100 bases:
>100_bases TAGAAGGGTAACCTTTCGCTTGCATGTCGCGTCGATCTCTGCCATGTAATGGATCGGAACCGGGGAACAGGTGGCCCAAT CGACGCGAAGGAGAGGGGAC
Downstream 100 bases:
>100_bases CTCTCACAGGAGCCCGCCATGCCCGGAAAAGTCGCCCTTGCCGCCATCATCCTGCTCGCCGCGGTCTCCGCGGTCCATGC CGCGGACCCCCCCGCGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MADQAVLQKLFQDGGARDYRWIDPEEIVVGQWVRMKCMFGCSDYGRNASCPPNTPPVGECRDFFREYRLGAIFRFTKQLD DPEERHGWSRELNQKLLELERAVFLAGYPKAFLMFMDNCKLCRECARTRAGCRNLKHARPSAEAMGVDVFATVAKFDYPI DVLGRYTDEMNRYAFLLIE
Sequences:
>Translated_179_residues MADQAVLQKLFQDGGARDYRWIDPEEIVVGQWVRMKCMFGCSDYGRNASCPPNTPPVGECRDFFREYRLGAIFRFTKQLD DPEERHGWSRELNQKLLELERAVFLAGYPKAFLMFMDNCKLCRECARTRAGCRNLKHARPSAEAMGVDVFATVAKFDYPI DVLGRYTDEMNRYAFLLIE >Mature_178_residues ADQAVLQKLFQDGGARDYRWIDPEEIVVGQWVRMKCMFGCSDYGRNASCPPNTPPVGECRDFFREYRLGAIFRFTKQLDD PEERHGWSRELNQKLLELERAVFLAGYPKAFLMFMDNCKLCRECARTRAGCRNLKHARPSAEAMGVDVFATVAKFDYPID VLGRYTDEMNRYAFLLIE
Specific function: Unknown
COG id: COG5423
COG function: function code S; Predicted metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20772; Mature: 20641
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 8.4 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADQAVLQKLFQDGGARDYRWIDPEEIVVGQWVRMKCMFGCSDYGRNASCPPNTPPVGEC CCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCHHHH RDFFREYRLGAIFRFTKQLDDPEERHGWSRELNQKLLELERAVFLAGYPKAFLMFMDNCK HHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCH LCRECARTRAGCRNLKHARPSAEAMGVDVFATVAKFDYPIDVLGRYTDEMNRYAFLLIE HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEC >Mature Secondary Structure ADQAVLQKLFQDGGARDYRWIDPEEIVVGQWVRMKCMFGCSDYGRNASCPPNTPPVGEC CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCHHHH RDFFREYRLGAIFRFTKQLDDPEERHGWSRELNQKLLELERAVFLAGYPKAFLMFMDNCK HHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCH LCRECARTRAGCRNLKHARPSAEAMGVDVFATVAKFDYPIDVLGRYTDEMNRYAFLLIE HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA