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The map label for this gene is cheD1

Identifier: 39995832

GI number: 39995832

Start: 774287

End: 774949

Strand: Direct

Name: cheD1

Synonym: GSU0726

Alternate gene names: 39995832

Gene position: 774287-774949 (Clockwise)

Preceding gene: 39995831

Following gene: 39995834

Centisome position: 20.3

GC content: 61.39

Gene sequence:

>663_bases
TTGCGGAGGCACATTTTACAGGCATGCGGGATACGCCGATTCTGCTATACTGTAACAATGCGTCATCAACGCCTCGAAGG
CCGTCACATTATCCGTATCGCTCCCGGCGAATACCACGTCACTACAGGCGGGGGCGTCATTTCGACGCTTCTCGGTTCGT
GCGTGGCCGCCTGCCTGTTCGACTCGGAAAGCGGCGTGGCCGGGATGAATCATTTTCTGCTCAGCAATCACCGCTACTCC
CGCACCATGCCCTTCTGCTTCACCGAGGCGGGGCGCTACGGCATCCACTCCATGGAACTGCTTATCAACTCTCTCATGCG
CCACGGTGCGCGGCGGGAGAACCTCCGCGCCAAGGCCTTCGGCGGTGCCTCGATTCTGGTCAATCGCGCCGAGGTCGGCA
ACTTTTCCTGTGTCGGCAGCGTCAATGCCCGGTTTGTCCGGGAGTTTCTCGCCAATGAAGGGATTCCGCTCCTCTCCGCC
GACCTGGAGGGGGAGCGGGGCCGCGTGATCTATTTCGATACAACGGACTTTTCCGTATTCGTCCGCAAGATCCGGCTCCA
GCGGAGCCTCGTGGTGGCCAAGCGCGACCGGAACGTGTGGGAACACGGGGTCCAGGCCCATGATGTGGAACCGGACTCGG
TCGACCTCTGGCTGCCGGGGTAG

Upstream 100 bases:

>100_bases
CCACGCGGTGGAGCAATTCCGCGCCTTCGGCGGCGACAGCCGGGCAGACCTGGCCTGCCGGGCTACGTGCAAGGCCCCCT
CCTGCGGCTGCAAAGGGTAG

Downstream 100 bases:

>100_bases
GCCGAGATCTCACCAGACCTGGAACGTGCCGTAGACCGGGTTCGACAGGTTGCCGCCGCGGTCGGTGAGGTAGATGGTGA
AGGTATAGGTTCCCGGCGGA

Product: chemotaxis protein CheD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MRRHILQACGIRRFCYTVTMRHQRLEGRHIIRIAPGEYHVTTGGGVISTLLGSCVAACLFDSESGVAGMNHFLLSNHRYS
RTMPFCFTEAGRYGIHSMELLINSLMRHGARRENLRAKAFGGASILVNRAEVGNFSCVGSVNARFVREFLANEGIPLLSA
DLEGERGRVIYFDTTDFSVFVRKIRLQRSLVVAKRDRNVWEHGVQAHDVEPDSVDLWLPG

Sequences:

>Translated_220_residues
MRRHILQACGIRRFCYTVTMRHQRLEGRHIIRIAPGEYHVTTGGGVISTLLGSCVAACLFDSESGVAGMNHFLLSNHRYS
RTMPFCFTEAGRYGIHSMELLINSLMRHGARRENLRAKAFGGASILVNRAEVGNFSCVGSVNARFVREFLANEGIPLLSA
DLEGERGRVIYFDTTDFSVFVRKIRLQRSLVVAKRDRNVWEHGVQAHDVEPDSVDLWLPG
>Mature_220_residues
MRRHILQACGIRRFCYTVTMRHQRLEGRHIIRIAPGEYHVTTGGGVISTLLGSCVAACLFDSESGVAGMNHFLLSNHRYS
RTMPFCFTEAGRYGIHSMELLINSLMRHGARRENLRAKAFGGASILVNRAEVGNFSCVGSVNARFVREFLANEGIPLLSA
DLEGERGRVIYFDTTDFSVFVRKIRLQRSLVVAKRDRNVWEHGVQAHDVEPDSVDLWLPG

Specific function: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CHED1_GEOSL (Q74F83)

Other databases:

- EMBL:   AE017180
- RefSeq:   NP_951783.1
- HSSP:   Q9X005
- ProteinModelPortal:   Q74F83
- SMR:   Q74F83
- GeneID:   2685516
- GenomeReviews:   AE017180_GR
- KEGG:   gsu:GSU0726
- NMPDR:   fig|243231.1.peg.721
- TIGR:   GSU0726
- HOGENOM:   HBG531149
- OMA:   RYGIHAM
- ProtClustDB:   CLSK815250
- BioCyc:   GSUL243231:GSU_0726-MONOMER
- BRENDA:   3.5.1.44
- GO:   GO:0006935
- HAMAP:   MF_01440
- InterPro:   IPR005659

Pfam domain/function: PF03975 CheD

EC number: =3.5.1.44

Molecular weight: Translated: 24720; Mature: 24720

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRHILQACGIRRFCYTVTMRHQRLEGRHIIRIAPGEYHVTTGGGVISTLLGSCVAACLF
CCCHHHHHHCHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHHC
DSESGVAGMNHFLLSNHRYSRTMPFCFTEAGRYGIHSMELLINSLMRHGARRENLRAKAF
CCCCCCCHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCHHCCCEEEEC
GGASILVNRAEVGNFSCVGSVNARFVREFLANEGIPLLSADLEGERGRVIYFDTTDFSVF
CCCEEEEEECCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCHHHH
VRKIRLQRSLVVAKRDRNVWEHGVQAHDVEPDSVDLWLPG
HHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCEEEEECC
>Mature Secondary Structure
MRRHILQACGIRRFCYTVTMRHQRLEGRHIIRIAPGEYHVTTGGGVISTLLGSCVAACLF
CCCHHHHHHCHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHHC
DSESGVAGMNHFLLSNHRYSRTMPFCFTEAGRYGIHSMELLINSLMRHGARRENLRAKAF
CCCCCCCHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCHHCCCEEEEC
GGASILVNRAEVGNFSCVGSVNARFVREFLANEGIPLLSADLEGERGRVIYFDTTDFSVF
CCCEEEEEECCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCHHHH
VRKIRLQRSLVVAKRDRNVWEHGVQAHDVEPDSVDLWLPG
HHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA