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The map label for this gene is ybfB [H]

Identifier: 39995812

GI number: 39995812

Start: 753762

End: 755048

Strand: Reverse

Name: ybfB [H]

Synonym: GSU0706

Alternate gene names: 39995812

Gene position: 755048-753762 (Counterclockwise)

Preceding gene: 39995813

Following gene: 39995806

Centisome position: 19.8

GC content: 68.45

Gene sequence:

>1287_bases
GTGACGACGCCCACCGACCGACATGCCGACCGACCCGGCACTGTCCCGGCGGCCGGCCGGCGATTCCACTACGCCTGGGT
CATCGTGGCCGTAGGCTTCCTGATCATCTTCGCCTGCATCGGCCTGGCCCGCTACGCCTACACCATGCTCCTCCCCTCCA
TGCAGGCGGGGCTGGGGCTCTCCTACGACCGCATGGGATTCATCGGGACCGGCAATTTCTGCGGCTACCTCCTTTCCGTA
ATCCTGGCGCCCCGGCTCATCCGGCGTTTCCAGCCAAGGGCGGTGATCAGCGGCGGACTGGCACTGATCACCCTGGCCAT
GCCGGCCATGGGGCTTTCCAGCGGCTTTGCGGCCCCCTTTGCACTCTATGCCCTGGTGGGCATGGGGACCGGGTTCGCCA
ACATCCCCACCATGGTGCTGATCGGCCACTGGTTCCGCAGCGACCGGCGCGGCACGGCGGCAGGGCTGATGATCGCCGGC
AACGGGGCGGCCATCGTACTGGCCGGAGTGTTGGTACCCAGGCTGAACGGCATCTTCGGGGCCAACGGCTGGCGGGCCGG
CTGGCTGCTGCTGGGATGCGTCGCCCTGGGGGTCGCGGTCCTGTCGGCATGGCTGGTGCGCAATCATCCCTCGGACGTGG
GGCATGAACCGCTCGGCCGGAGCGCGGCCCTGGCGCCGGAGGATCTCGTGCCCCACGAGCGGCCCGGCGACGGCATGCTG
CTGATGCGGCTGGGACTCCTCTACCTGGCCTTCGGCGCAACCTTCATGATCTATGGCACGTTCATCGTCACCACCATGGT
GCGGGAGTTCGGCTTCAGCGAGGCCCGGGCCGGCCTCTACTGGTCGTGGGCGGGTTTTTTCAGCTGCTTCTCGGGGGTGG
TGTTCGGGGCGCTTTCAGACCGCATCGGCCGCCGCCACGGGCTGGCGCTGGTGTTCGCCGTGCAGAGCACGGCCTACCTG
ATCGCGGGTACGAAACCGGGAGGGGTGGGTCTGGTGGTCTCCATCGTGCTGTACGGGCTTGCGGTCTTTGCCATTCCGGC
CATCATGGCGGCCGCCGTGGGGGATTACCTGGGCGCGCCCCGCGCCGCCGGGGCCTTCGCCACGATCACCATCTTCTTTG
CCGTGGGCCAGACCTTGGGCCCTGCCCTGGCGGGGATGATCGGCAAGGCAGCCGGCAGCTTCTCCGGTGCCTACCTGCTG
GCTGCGTCGATCACGGTCTGCGCCCTGCTGTTCACCCTCTTCCTTCCCCGGCCCGAAGACACGACCACGCCACACCGGGC
CCAATAG

Upstream 100 bases:

>100_bases
TGTTCGGGGAACCGGCCAACCCGGCCCGGCTGATCAGTGTTGCGCTGATCGTCGCCGGCATCATCGGGCTCAAGCTCTCT
TCGCCAGCCTGAGGACTCAG

Downstream 100 bases:

>100_bases
TCCCCTGCGGCCGGGATTGCTCCCATAGCCGGAGCATCATTCCCGCCGGCCGCCTGTTGTTCCTCTACTGGAAATACTCC
GAGTGGATGGAGGTCCCCAT

Product: major facilitator family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MTTPTDRHADRPGTVPAAGRRFHYAWVIVAVGFLIIFACIGLARYAYTMLLPSMQAGLGLSYDRMGFIGTGNFCGYLLSV
ILAPRLIRRFQPRAVISGGLALITLAMPAMGLSSGFAAPFALYALVGMGTGFANIPTMVLIGHWFRSDRRGTAAGLMIAG
NGAAIVLAGVLVPRLNGIFGANGWRAGWLLLGCVALGVAVLSAWLVRNHPSDVGHEPLGRSAALAPEDLVPHERPGDGML
LMRLGLLYLAFGATFMIYGTFIVTTMVREFGFSEARAGLYWSWAGFFSCFSGVVFGALSDRIGRRHGLALVFAVQSTAYL
IAGTKPGGVGLVVSIVLYGLAVFAIPAIMAAAVGDYLGAPRAAGAFATITIFFAVGQTLGPALAGMIGKAAGSFSGAYLL
AASITVCALLFTLFLPRPEDTTTPHRAQ

Sequences:

>Translated_428_residues
MTTPTDRHADRPGTVPAAGRRFHYAWVIVAVGFLIIFACIGLARYAYTMLLPSMQAGLGLSYDRMGFIGTGNFCGYLLSV
ILAPRLIRRFQPRAVISGGLALITLAMPAMGLSSGFAAPFALYALVGMGTGFANIPTMVLIGHWFRSDRRGTAAGLMIAG
NGAAIVLAGVLVPRLNGIFGANGWRAGWLLLGCVALGVAVLSAWLVRNHPSDVGHEPLGRSAALAPEDLVPHERPGDGML
LMRLGLLYLAFGATFMIYGTFIVTTMVREFGFSEARAGLYWSWAGFFSCFSGVVFGALSDRIGRRHGLALVFAVQSTAYL
IAGTKPGGVGLVVSIVLYGLAVFAIPAIMAAAVGDYLGAPRAAGAFATITIFFAVGQTLGPALAGMIGKAAGSFSGAYLL
AASITVCALLFTLFLPRPEDTTTPHRAQ
>Mature_427_residues
TTPTDRHADRPGTVPAAGRRFHYAWVIVAVGFLIIFACIGLARYAYTMLLPSMQAGLGLSYDRMGFIGTGNFCGYLLSVI
LAPRLIRRFQPRAVISGGLALITLAMPAMGLSSGFAAPFALYALVGMGTGFANIPTMVLIGHWFRSDRRGTAAGLMIAGN
GAAIVLAGVLVPRLNGIFGANGWRAGWLLLGCVALGVAVLSAWLVRNHPSDVGHEPLGRSAALAPEDLVPHERPGDGMLL
MRLGLLYLAFGATFMIYGTFIVTTMVREFGFSEARAGLYWSWAGFFSCFSGVVFGALSDRIGRRHGLALVFAVQSTAYLI
AGTKPGGVGLVVSIVLYGLAVFAIPAIMAAAVGDYLGAPRAAGAFATITIFFAVGQTLGPALAGMIGKAAGSFSGAYLLA
ASITVCALLFTLFLPRPEDTTTPHRAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Homo sapiens, GI24431958, Length=418, Percent_Identity=22.488038277512, Blast_Score=70, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 44875; Mature: 44743

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPTDRHADRPGTVPAAGRRFHYAWVIVAVGFLIIFACIGLARYAYTMLLPSMQAGLGL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SYDRMGFIGTGNFCGYLLSVILAPRLIRRFQPRAVISGGLALITLAMPAMGLSSGFAAPF
CHHCCCEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHCCCCCCHHHH
ALYALVGMGTGFANIPTMVLIGHWFRSDRRGTAAGLMIAGNGAAIVLAGVLVPRLNGIFG
HHHHHHHCCCCCHHCCHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCC
ANGWRAGWLLLGCVALGVAVLSAWLVRNHPSDVGHEPLGRSAALAPEDLVPHERPGDGML
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHH
LMRLGLLYLAFGATFMIYGTFIVTTMVREFGFSEARAGLYWSWAGFFSCFSGVVFGALSD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEHHHHHHHHHHHHHHHHHHH
RIGRRHGLALVFAVQSTAYLIAGTKPGGVGLVVSIVLYGLAVFAIPAIMAAAVGDYLGAP
HHHHHCCEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RAAGAFATITIFFAVGQTLGPALAGMIGKAAGSFSGAYLLAASITVCALLFTLFLPRPED
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
TTTPHRAQ
CCCCCCCC
>Mature Secondary Structure 
TTPTDRHADRPGTVPAAGRRFHYAWVIVAVGFLIIFACIGLARYAYTMLLPSMQAGLGL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SYDRMGFIGTGNFCGYLLSVILAPRLIRRFQPRAVISGGLALITLAMPAMGLSSGFAAPF
CHHCCCEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHCCCCCCHHHH
ALYALVGMGTGFANIPTMVLIGHWFRSDRRGTAAGLMIAGNGAAIVLAGVLVPRLNGIFG
HHHHHHHCCCCCHHCCHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCC
ANGWRAGWLLLGCVALGVAVLSAWLVRNHPSDVGHEPLGRSAALAPEDLVPHERPGDGML
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHH
LMRLGLLYLAFGATFMIYGTFIVTTMVREFGFSEARAGLYWSWAGFFSCFSGVVFGALSD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEHHHHHHHHHHHHHHHHHHH
RIGRRHGLALVFAVQSTAYLIAGTKPGGVGLVVSIVLYGLAVFAIPAIMAAAVGDYLGAP
HHHHHCCEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RAAGAFATITIFFAVGQTLGPALAGMIGKAAGSFSGAYLLAASITVCALLFTLFLPRPED
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
TTTPHRAQ
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]