| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995810
Identifier: 39995810
GI number: 39995810
Start: 751546
End: 752874
Strand: Direct
Name: 39995810
Synonym: GSU0704
Alternate gene names: NA
Gene position: 751546-752874 (Clockwise)
Preceding gene: 39995809
Following gene: 39995811
Centisome position: 19.7
GC content: 64.18
Gene sequence:
>1329_bases ATGGAGCGGATCAAGCGGTTTTTCCTGGCACGCGGCACGGTCATCAGTTTCATTCTCCTGGCACTCTGTGCCATCACCCT GGCAGCGTTCATTCCCCAGCGCTTCCTGACCTCGCCCGAAGAGATGCTGGCGTGGCAGTCGGCCTACCCGCTGTTCGCCC GCTGGAGTAGCCTGCTGGGCCTCCATCACATCTATACACATCCCGGCTTTGCCCTTATCCTTGCCGGGGGGACGATTTCC CTTGCCTTTTCGACCAGGAATCAGGCGCTTACCGCGTGGCAGCGCACCGTGCGCCCCGCCGGCGGTACAGCCGGGGACCG GCGCTTTTCCGTCGCCCGAGCGCCGGCGGAGGTTTCCCGCCTCCTGATGACCAACGGGTTCATCGGTCAGGGCATATTCG ATGGGGAAATCCGGCTGGTGCGCCACCCCTGGGGGTACTGGGGCAATACTCTGCTCCATTTCGGCATGGTGCTCACCATT GTCGCATCGCTCTGTATCGCCCTGACCCAGCAGCAGGGGGTGATACATCTGGCCGAGGGCGCCATCCAGCATCCGTCTCA TCCCCTGCTGCGAGAGGAGCACGGTCTTCTGGCCGGTCCGCTGCACCTGCCGGACGCCGTACGGCTCAACCGGGTCTCGT ACCGCTTCGGGGCGGACCTCGCCGTGCGGGAACTGGCCTCGACCCTTACGTTTCTGTCCGATGCCGGCATTGCCGAAACA AGGACCGTTGCCATCAACCGCATTCTCAACCACCGGGGCCTCCGCTTCTACCAGGGCGTGGAGTTCGGTCACGCCTTTTT CGTGGAGGCGACCGGGCCGACGGGGGAGCCGAAGGTGTTCCAGCTCCAGTTCATGCACCCCGACAGACCCGACCTGCCGA GCTATAATGATTTCCCGAACCTGCTGGGCGACGGCTCCCTGGTGCGGGCCAAGTACCTGGTGGATGGGGAGGGAAAGACC TTCGATCGGGCAAGCCCTCTGCTCACCCTGCGCCTGGATCGTGACGGACAGGAGGTGGGGCGGCTCCCTCTGCAGCCGGG AGGGGAGGGGGCCATCGGGCAGTATCGCTTCCGGCTGCTGGGCTTCGCCCCCTGGTCGCGGCTGATCATGGTGAACGTAA CCGGAATGCCGCTGATATTTGCGGGTTTCTTTGTCATCTGCCTGGGCGGTGTCCTTCACTATTTCACCCCGCCCCGTCAG GTGTCACTGGCTGAAGGGGCGGGCGGCGGCACGACGGTGTCCTGGCGGGCGGCGAGATTCTCCGGATTCTACCGGGATGA GCCGGATTCGTTGAAACGGATGGTGGAACGCGAGGGAGTGCATGACTGA
Upstream 100 bases:
>100_bases GCACCAGCACCAATAACGTGGTCCCCTGGCCGGTGCTGGACCGCAAGGGGAGGGTCGTCAATCAGGCGCCCGGCGGCGCC CAGGGACGGCACCCCTGACC
Downstream 100 bases:
>100_bases TCAGGCGTCGGTATACGTGGCAATGAACTGGCTGGCGGTCTGCTGCTATGTGGTGGCGACCGTCCTCAATGCCAGCGGTA TCATCTTTCGGAAGGCCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MERIKRFFLARGTVISFILLALCAITLAAFIPQRFLTSPEEMLAWQSAYPLFARWSSLLGLHHIYTHPGFALILAGGTIS LAFSTRNQALTAWQRTVRPAGGTAGDRRFSVARAPAEVSRLLMTNGFIGQGIFDGEIRLVRHPWGYWGNTLLHFGMVLTI VASLCIALTQQQGVIHLAEGAIQHPSHPLLREEHGLLAGPLHLPDAVRLNRVSYRFGADLAVRELASTLTFLSDAGIAET RTVAINRILNHRGLRFYQGVEFGHAFFVEATGPTGEPKVFQLQFMHPDRPDLPSYNDFPNLLGDGSLVRAKYLVDGEGKT FDRASPLLTLRLDRDGQEVGRLPLQPGGEGAIGQYRFRLLGFAPWSRLIMVNVTGMPLIFAGFFVICLGGVLHYFTPPRQ VSLAEGAGGGTTVSWRAARFSGFYRDEPDSLKRMVEREGVHD
Sequences:
>Translated_442_residues MERIKRFFLARGTVISFILLALCAITLAAFIPQRFLTSPEEMLAWQSAYPLFARWSSLLGLHHIYTHPGFALILAGGTIS LAFSTRNQALTAWQRTVRPAGGTAGDRRFSVARAPAEVSRLLMTNGFIGQGIFDGEIRLVRHPWGYWGNTLLHFGMVLTI VASLCIALTQQQGVIHLAEGAIQHPSHPLLREEHGLLAGPLHLPDAVRLNRVSYRFGADLAVRELASTLTFLSDAGIAET RTVAINRILNHRGLRFYQGVEFGHAFFVEATGPTGEPKVFQLQFMHPDRPDLPSYNDFPNLLGDGSLVRAKYLVDGEGKT FDRASPLLTLRLDRDGQEVGRLPLQPGGEGAIGQYRFRLLGFAPWSRLIMVNVTGMPLIFAGFFVICLGGVLHYFTPPRQ VSLAEGAGGGTTVSWRAARFSGFYRDEPDSLKRMVEREGVHD >Mature_442_residues MERIKRFFLARGTVISFILLALCAITLAAFIPQRFLTSPEEMLAWQSAYPLFARWSSLLGLHHIYTHPGFALILAGGTIS LAFSTRNQALTAWQRTVRPAGGTAGDRRFSVARAPAEVSRLLMTNGFIGQGIFDGEIRLVRHPWGYWGNTLLHFGMVLTI VASLCIALTQQQGVIHLAEGAIQHPSHPLLREEHGLLAGPLHLPDAVRLNRVSYRFGADLAVRELASTLTFLSDAGIAET RTVAINRILNHRGLRFYQGVEFGHAFFVEATGPTGEPKVFQLQFMHPDRPDLPSYNDFPNLLGDGSLVRAKYLVDGEGKT FDRASPLLTLRLDRDGQEVGRLPLQPGGEGAIGQYRFRLLGFAPWSRLIMVNVTGMPLIFAGFFVICLGGVLHYFTPPRQ VSLAEGAGGGTTVSWRAARFSGFYRDEPDSLKRMVEREGVHD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48846; Mature: 48846
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERIKRFFLARGTVISFILLALCAITLAAFIPQRFLTSPEEMLAWQSAYPLFARWSSLLG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHH LHHIYTHPGFALILAGGTISLAFSTRNQALTAWQRTVRPAGGTAGDRRFSVARAPAEVSR HHHHHCCCCEEEEEECCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHH LLMTNGFIGQGIFDGEIRLVRHPWGYWGNTLLHFGMVLTIVASLCIALTQQQGVIHLAEG HHHHCCCCCCCEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC AIQHPSHPLLREEHGLLAGPLHLPDAVRLNRVSYRFGADLAVRELASTLTFLSDAGIAET CCCCCCCCCHHHCCCCEECCCCCCCCHHHEEEEHHHCCHHHHHHHHHHHHHHHCCCCCHH RTVAINRILNHRGLRFYQGVEFGHAFFVEATGPTGEPKVFQLQFMHPDRPDLPSYNDFPN HHHHHHHHHHHCCCEEECCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCHH LLGDGSLVRAKYLVDGEGKTFDRASPLLTLRLDRDGQEVGRLPLQPGGEGAIGQYRFRLL HHCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCHHHCCCCCCCCCCCCHHHEEEEEE GFAPWSRLIMVNVTGMPLIFAGFFVICLGGVLHYFTPPRQVSLAEGAGGGTTVSWRAARF EECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEHHHH SGFYRDEPDSLKRMVEREGVHD CCCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure MERIKRFFLARGTVISFILLALCAITLAAFIPQRFLTSPEEMLAWQSAYPLFARWSSLLG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHH LHHIYTHPGFALILAGGTISLAFSTRNQALTAWQRTVRPAGGTAGDRRFSVARAPAEVSR HHHHHCCCCEEEEEECCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHH LLMTNGFIGQGIFDGEIRLVRHPWGYWGNTLLHFGMVLTIVASLCIALTQQQGVIHLAEG HHHHCCCCCCCEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC AIQHPSHPLLREEHGLLAGPLHLPDAVRLNRVSYRFGADLAVRELASTLTFLSDAGIAET CCCCCCCCCHHHCCCCEECCCCCCCCHHHEEEEHHHCCHHHHHHHHHHHHHHHCCCCCHH RTVAINRILNHRGLRFYQGVEFGHAFFVEATGPTGEPKVFQLQFMHPDRPDLPSYNDFPN HHHHHHHHHHHCCCEEECCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCHH LLGDGSLVRAKYLVDGEGKTFDRASPLLTLRLDRDGQEVGRLPLQPGGEGAIGQYRFRLL HHCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCHHHCCCCCCCCCCCCHHHEEEEEE GFAPWSRLIMVNVTGMPLIFAGFFVICLGGVLHYFTPPRQVSLAEGAGGGTTVSWRAARF EECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEHHHH SGFYRDEPDSLKRMVEREGVHD CCCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA