| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995803
Identifier: 39995803
GI number: 39995803
Start: 736709
End: 737908
Strand: Reverse
Name: 39995803
Synonym: GSU0697
Alternate gene names: NA
Gene position: 737908-736709 (Counterclockwise)
Preceding gene: 39995806
Following gene: 39995801
Centisome position: 19.35
GC content: 68.92
Gene sequence:
>1200_bases ATGGAGAGAATAGCCCTGCCGCGCCGGACACTAGGGGCGCGCCGCAGAGAGGTTCCCGTGACGCCCGACACCCTGCTTCC CCTCCTCGCCGTTCTCCCGCCGCTGGCCTACGGGCTCCTGGCACTCTTCTGCGCCCGGGCCTGGTTCGGCCGGCAGCGAC CCGGACCGGGACACACCCCGCCGGTGACCATCCTCAAGCCGGTCAAGGGGATGGACGCAGAGAGCTTCGAGAACTTCGCC TCCTTCTGCCGCCAGGAGTACGGCGGGCCGTGGCAGATGCTCTTTGCCTGCGCCTCGGCCGACGACCCGGTCATTCCGGT GATCCGGCGCCTCATGGCCGAGTTTCCGGACCGTGACATCGATCTGGTGGTGGACGGCACCATCCATGGCCCCAACTACA AGGTCTCCAACCTGATCAACGCCTTCCCAAGGGCCAGGCACGACATCCTCATCGTCTGCGACAGCGACATCCGTGTCACG TCCGACTATCTGGGGGAGGTGACCGCGCCGTTCGCCGACCCGGCAGTGGGGCTCGTCACCTCTCTCTACCGGAGCCCCGG CGTACGGGGCGCCGCCACGGCCCTGGAGGCCATGGGGTTCACAGTGGAGATGGTGCCGAACGTCATGGTCGCCCAACGGC TCGAAGGGCTTTCCTTCGCCCTGGGCGCCTCCATGGCGGTGCGGCGCACGGCACTGGAGTCCATCGGCGGCTTCCCGGCC CTGACCCACTATCTGGCCGACGACTACCAGCTGGGCAACAAGATCCACCGGGCCGGCTGGCGGCTGGAGCTGTCGGACTG TTTCGTGGAGAGCGTCATGCACCGGGAGAACCTGACCACGGTCCTCTCCCGCCAGCTCCGCTGGTGCCGCACCATGCGGG CCTCGCGCCCCGGCGGCTACCTGGGCTCGGGCATCACCCAGCCCGTTCCCCTGGCCTGCCTGGCACTTCTGGTGTCGGGC TGTTCCGCCGCCGGATGGGGGGCGGTGATCCTCCTCTACCTGACCCGCGCCCTGGTGGCCGTTACCTTCAGCCGCCGGTA CCTGCGGGACGGCATCTTCCCCCGCTGGCTCTGGCTCCTCCCCCTGCGCGACATCCTCGCCTTCGCCACCTGGGCCCTCT CCTTCGCCGGCAACCGGGTCCGCTGGCGCGGCAACCTCTTCCGGCTCCTGCCGGGAGGAAAGATCGTGGAAATCGGCTGA
Upstream 100 bases:
>100_bases GCTCATTGCCGGTGCATCGTAAACGAAAACGGCATACCGTGCAACGCATGCCGTCGGAACCGCTTCCCTGGGGGAAAAAG GGGTTGCATAATCAGCCCAA
Downstream 100 bases:
>100_bases GAGTTACACGTACACCATCTTCCGCGTCATTCCCCCGTCCACCACGAAATTGACGCCGGTGACGAATCCCGCCTCGGGCG AGACCAGCCACGCCGCCAGG
Product: ceramide glucosyltransferase
Products: UDP; D-glucosyl-N-acylsphingosine
Alternate protein names: Glycosyltransferase; Glycosyl Transferase Family Protein; Glucosyltransferase; Cell Wall Biosynthesis Glycosyltransferase-Like Protein; Glycosyl Transferase Group 2 Family; Glycosyl Transferase; Cell Wall Biosynthesis Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein; Acyl-CoA Dehydrogenase-Like; Acyl-CoA Dehydrogenase-Like Protein; UDP-GlucoseCeramide Glycosyltransferase; Glycosyltransferase Family; Glycosyl Transferase Protein; Glycosyl Tranferase Homolog; Syl Transferase Group 2 Family Protein; Putatiave Glycosyltransferase; Family 2 Glycosyl Transferase
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MERIALPRRTLGARRREVPVTPDTLLPLLAVLPPLAYGLLALFCARAWFGRQRPGPGHTPPVTILKPVKGMDAESFENFA SFCRQEYGGPWQMLFACASADDPVIPVIRRLMAEFPDRDIDLVVDGTIHGPNYKVSNLINAFPRARHDILIVCDSDIRVT SDYLGEVTAPFADPAVGLVTSLYRSPGVRGAATALEAMGFTVEMVPNVMVAQRLEGLSFALGASMAVRRTALESIGGFPA LTHYLADDYQLGNKIHRAGWRLELSDCFVESVMHRENLTTVLSRQLRWCRTMRASRPGGYLGSGITQPVPLACLALLVSG CSAAGWGAVILLYLTRALVAVTFSRRYLRDGIFPRWLWLLPLRDILAFATWALSFAGNRVRWRGNLFRLLPGGKIVEIG
Sequences:
>Translated_399_residues MERIALPRRTLGARRREVPVTPDTLLPLLAVLPPLAYGLLALFCARAWFGRQRPGPGHTPPVTILKPVKGMDAESFENFA SFCRQEYGGPWQMLFACASADDPVIPVIRRLMAEFPDRDIDLVVDGTIHGPNYKVSNLINAFPRARHDILIVCDSDIRVT SDYLGEVTAPFADPAVGLVTSLYRSPGVRGAATALEAMGFTVEMVPNVMVAQRLEGLSFALGASMAVRRTALESIGGFPA LTHYLADDYQLGNKIHRAGWRLELSDCFVESVMHRENLTTVLSRQLRWCRTMRASRPGGYLGSGITQPVPLACLALLVSG CSAAGWGAVILLYLTRALVAVTFSRRYLRDGIFPRWLWLLPLRDILAFATWALSFAGNRVRWRGNLFRLLPGGKIVEIG >Mature_399_residues MERIALPRRTLGARRREVPVTPDTLLPLLAVLPPLAYGLLALFCARAWFGRQRPGPGHTPPVTILKPVKGMDAESFENFA SFCRQEYGGPWQMLFACASADDPVIPVIRRLMAEFPDRDIDLVVDGTIHGPNYKVSNLINAFPRARHDILIVCDSDIRVT SDYLGEVTAPFADPAVGLVTSLYRSPGVRGAATALEAMGFTVEMVPNVMVAQRLEGLSFALGASMAVRRTALESIGGFPA LTHYLADDYQLGNKIHRAGWRLELSDCFVESVMHRENLTTVLSRQLRWCRTMRASRPGGYLGSGITQPVPLACLALLVSG CSAAGWGAVILLYLTRALVAVTFSRRYLRDGIFPRWLWLLPLRDILAFATWALSFAGNRVRWRGNLFRLLPGGKIVEIG
Specific function: Unknown
COG id: COG1215
COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4507811, Length=350, Percent_Identity=26.2857142857143, Blast_Score=123, Evalue=3e-28, Organism=Caenorhabditis elegans, GI25147526, Length=349, Percent_Identity=24.3553008595989, Blast_Score=109, Evalue=3e-24, Organism=Caenorhabditis elegans, GI25149574, Length=400, Percent_Identity=24.25, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI25149577, Length=400, Percent_Identity=24.25, Blast_Score=102, Evalue=3e-22, Organism=Caenorhabditis elegans, GI32564728, Length=344, Percent_Identity=25.5813953488372, Blast_Score=102, Evalue=5e-22, Organism=Caenorhabditis elegans, GI25149580, Length=295, Percent_Identity=25.7627118644068, Blast_Score=96, Evalue=3e-20, Organism=Caenorhabditis elegans, GI32566973, Length=356, Percent_Identity=24.1573033707865, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI24657569, Length=260, Percent_Identity=26.1538461538462, Blast_Score=100, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.4.1.80
Molecular weight: Translated: 44002; Mature: 44002
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: PS00606 B_KETOACYL_SYNTHASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERIALPRRTLGARRREVPVTPDTLLPLLAVLPPLAYGLLALFCARAWFGRQRPGPGHTP CCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PVTILKPVKGMDAESFENFASFCRQEYGGPWQMLFACASADDPVIPVIRRLMAEFPDRDI CEEHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCE DLVVDGTIHGPNYKVSNLINAFPRARHDILIVCDSDIRVTSDYLGEVTAPFADPAVGLVT EEEEECEEECCCCHHHHHHHHHCCCCCCEEEEECCCCEECHHHHHHHCCCCCCHHHHHHH SLYRSPGVRGAATALEAMGFTVEMVPNVMVAQRLEGLSFALGASMAVRRTALESIGGFPA HHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHH LTHYLADDYQLGNKIHRAGWRLELSDCFVESVMHRENLTTVLSRQLRWCRTMRASRPGGY HHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LGSGITQPVPLACLALLVSGCSAAGWGAVILLYLTRALVAVTFSRRYLRDGIFPRWLWLL CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH PLRDILAFATWALSFAGNRVRWRGNLFRLLPGGKIVEIG HHHHHHHHHHHHHHHCCCEEEEECCEEEECCCCEEEECC >Mature Secondary Structure MERIALPRRTLGARRREVPVTPDTLLPLLAVLPPLAYGLLALFCARAWFGRQRPGPGHTP CCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PVTILKPVKGMDAESFENFASFCRQEYGGPWQMLFACASADDPVIPVIRRLMAEFPDRDI CEEHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCE DLVVDGTIHGPNYKVSNLINAFPRARHDILIVCDSDIRVTSDYLGEVTAPFADPAVGLVT EEEEECEEECCCCHHHHHHHHHCCCCCCEEEEECCCCEECHHHHHHHCCCCCCHHHHHHH SLYRSPGVRGAATALEAMGFTVEMVPNVMVAQRLEGLSFALGASMAVRRTALESIGGFPA HHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHH LTHYLADDYQLGNKIHRAGWRLELSDCFVESVMHRENLTTVLSRQLRWCRTMRASRPGGY HHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LGSGITQPVPLACLALLVSGCSAAGWGAVILLYLTRALVAVTFSRRYLRDGIFPRWLWLL CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH PLRDILAFATWALSFAGNRVRWRGNLFRLLPGGKIVEIG HHHHHHHHHHHHHHHCCCEEEEECCEEEECCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: UDP-glucose; N-acylsphingosine
Specific reaction: UDP-glucose + N-acylsphingosine = UDP + D-glucosyl-N-acylsphingosine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA