| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is gph [C]
Identifier: 39995800
GI number: 39995800
Start: 734456
End: 735100
Strand: Reverse
Name: gph [C]
Synonym: GSU0694
Alternate gene names: 39995800
Gene position: 735100-734456 (Counterclockwise)
Preceding gene: 39995801
Following gene: 39995798
Centisome position: 19.27
GC content: 68.53
Gene sequence:
>645_bases ATGACGGACGAACGGCGTCCGGACCCGGTCGTGCCTGACCTGCTGGCGCGCCCTTACTGGATCTTCGACATGGATGGAAC CCTGACCGAGCCGGTTCACGACTTCGCCGCCATACGCGCCGCCCTGGGGGTGCCGGCGGGGTGCGACATCCTCGGCCATC TGGACACTCTCCCCGAAGGGGAGTCGCGGCGTCTACACGGACTTCTGGACGAAATCGAGATCGAACTGGCGGGCCGGGCC GAGGCGTCCGCCGGAGCCCGGCGCCTGGTGCAGGCCCTGGACCGGCGCGGAGTACGCATGGGGATCGTGACCCGCAACAC GAGACAGGTGGCGCTGCGGGTGCTGGAACATATCGGCGTGGGGAGCTACTTCCCGGCCGGGAGCATTCTGGGGCGTCACG ACGCACTCCCCAAGCCGGAGCCGGACGGCATCCTCCGCCTGGCGGCATCCTGGGGGACAACCGGACGGTCTGCGGTAATG GTGGGGGACTACCTCTTCGACCTCCAGTGCGGCCGGTCGGCAGGGGCGCTCACGGTACACGTGGACCGGACCCGAGCCTT CCGCTGGCCCCAGTTCACCGATCTGGCGGTGGCAAGCCTGGAAGAGCTGGCTGAACTGGTGGAACGGGGAATCAGCCGAG AGTGA
Upstream 100 bases:
>100_bases ACCGGGACATGACCCCGGAGGAGACCTACGGGCAGCTCGCCCAGAGTGCTGCACTGCTGGAAGCTGTTCTCGGCCGGGTT CAACAGCGGGGGGGCGAACG
Downstream 100 bases:
>100_bases AGGAGAACGCGGCCCCCCGTCCGATCTCGCTCTCGGCCCGGACCGTGCCGCCGTGGCGTTCCACGATCCGGCGGACAATG GCCAGCCCCATGCCTGGGCC
Product: HAD family hydrolase
Products: Glycolate; Phosphate [C]
Alternate protein names: HAD Superfamily Hydrolase; Hydrolase/Phosphatase Protein; Phosphoglycolate Phosphatase PGP; Haloacid Dehalogenase-Like Hydrolase; Phosphatase; HAD-Superfamily Hydrolase; Had-Superfamily Hydrolase Protein; Hydrolase; Haloacid Dehalogenase Hydrolase; Hydrolase HAD-Family Protein
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MTDERRPDPVVPDLLARPYWIFDMDGTLTEPVHDFAAIRAALGVPAGCDILGHLDTLPEGESRRLHGLLDEIEIELAGRA EASAGARRLVQALDRRGVRMGIVTRNTRQVALRVLEHIGVGSYFPAGSILGRHDALPKPEPDGILRLAASWGTTGRSAVM VGDYLFDLQCGRSAGALTVHVDRTRAFRWPQFTDLAVASLEELAELVERGISRE
Sequences:
>Translated_214_residues MTDERRPDPVVPDLLARPYWIFDMDGTLTEPVHDFAAIRAALGVPAGCDILGHLDTLPEGESRRLHGLLDEIEIELAGRA EASAGARRLVQALDRRGVRMGIVTRNTRQVALRVLEHIGVGSYFPAGSILGRHDALPKPEPDGILRLAASWGTTGRSAVM VGDYLFDLQCGRSAGALTVHVDRTRAFRWPQFTDLAVASLEELAELVERGISRE >Mature_213_residues TDERRPDPVVPDLLARPYWIFDMDGTLTEPVHDFAAIRAALGVPAGCDILGHLDTLPEGESRRLHGLLDEIEIELAGRAE ASAGARRLVQALDRRGVRMGIVTRNTRQVALRVLEHIGVGSYFPAGSILGRHDALPKPEPDGILRLAASWGTTGRSAVMV GDYLFDLQCGRSAGALTVHVDRTRAFRWPQFTDLAVASLEELAELVERGISRE
Specific function: Unknown
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6324705, Length=196, Percent_Identity=30.1020408163265, Blast_Score=86, Evalue=5e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.3.18 [C]
Molecular weight: Translated: 23410; Mature: 23279
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDERRPDPVVPDLLARPYWIFDMDGTLTEPVHDFAAIRAALGVPAGCDILGHLDTLPEG CCCCCCCCCCCHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCC ESRRLHGLLDEIEIELAGRAEASAGARRLVQALDRRGVRMGIVTRNTRQVALRVLEHIGV CCHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCC GSYFPAGSILGRHDALPKPEPDGILRLAASWGTTGRSAVMVGDYLFDLQCGRSAGALTVH CCCCCCCCCCCCCCCCCCCCCCHHEEEEECCCCCCCCEEEECCEEEEEECCCCCCEEEEE VDRTRAFRWPQFTDLAVASLEELAELVERGISRE EECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TDERRPDPVVPDLLARPYWIFDMDGTLTEPVHDFAAIRAALGVPAGCDILGHLDTLPEG CCCCCCCCCCHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCC ESRRLHGLLDEIEIELAGRAEASAGARRLVQALDRRGVRMGIVTRNTRQVALRVLEHIGV CCHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCC GSYFPAGSILGRHDALPKPEPDGILRLAASWGTTGRSAVMVGDYLFDLQCGRSAGALTVH CCCCCCCCCCCCCCCCCCCCCCHHEEEEECCCCCCCCEEEECCEEEEEECCCCCCEEEEE VDRTRAFRWPQFTDLAVASLEELAELVERGISRE EECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Mg2+ [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.57 {phosphoglycolate}} [C]
Substrates: D-Glycerate 2-phosphatelyc; H2O [C]
Specific reaction: D-Glycerate 2-phosphatelyc + H2O --> Glycolate + Phosphate [C]
General reaction: Additional information:
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA