| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
Click here to switch to the map view.
The map label for this gene is 39995753
Identifier: 39995753
GI number: 39995753
Start: 679693
End: 680277
Strand: Direct
Name: 39995753
Synonym: GSU0647
Alternate gene names: NA
Gene position: 679693-680277 (Clockwise)
Preceding gene: 39995752
Following gene: 39995754
Centisome position: 17.82
GC content: 58.12
Gene sequence:
>585_bases ATGACCTGCGGTGAGTGCAGCAGGCCTGCGGTGAGTGTGGCTCTTGTCCACTATCCGGTGTATGACAAGAATCGGCAGGT AGTCGCAACGGCCGTCACCAATCTTGACATCCATGATATTTCCCGCTCTGCCAGGACGTTCGGCCTCAATCATTACTACC TGGTTACCCCCGTCGAGGGCCAGAAGGAGTTGGCCGGGCGGATTATCAGGCATTGGCGGGAAGGATGGGGGGCATCCTAT AACCCCAAACGCAAGGCAGCTTTGGACCTCGTGCGGATTTCGAATTCCATTGAAGAGGTCCTGGAAGAACTCGGCAACGA ATACGGCGCACCTGCCCGGCTCGTTACCACCGGCGCCCGCCAGCATCCGCGCAGTATCGGGTATGAGCAGATGGCGTCGA TAATGGCACATGATCGTGAGCATCCCTATCTCATTGTGTTCGGTACGGGATGGGGGCTTACGGAGGATTTTTTCGACCGG GCGGACTTTGTGCTCGCCCCGATTCAGGGGCCGGGCGAGTATAACCACTTGTCGGTTCGGTCGGCAGCGGCAATCATCAT GGACAGGCTGTTCGGGGTGCGATGA
Upstream 100 bases:
>100_bases TTGAGTTGACGAGGCGGGTGCGTCCCGATCTGCTCCACAAAGCGGAACTAAGCAGCAGTGACCGGGACTGTCTGGCGATG CTCGAAAGGGAAGGCGAGCC
Downstream 100 bases:
>100_bases AAGCGGTGCCCCGCGCCAGATAGACCTGACAACAAACAGACGTTTTCTGTCAGATAAACGGGAGGAAGAGAAGCATGAAC AAGATTGATGCAATCGAACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MTCGECSRPAVSVALVHYPVYDKNRQVVATAVTNLDIHDISRSARTFGLNHYYLVTPVEGQKELAGRIIRHWREGWGASY NPKRKAALDLVRISNSIEEVLEELGNEYGAPARLVTTGARQHPRSIGYEQMASIMAHDREHPYLIVFGTGWGLTEDFFDR ADFVLAPIQGPGEYNHLSVRSAAAIIMDRLFGVR
Sequences:
>Translated_194_residues MTCGECSRPAVSVALVHYPVYDKNRQVVATAVTNLDIHDISRSARTFGLNHYYLVTPVEGQKELAGRIIRHWREGWGASY NPKRKAALDLVRISNSIEEVLEELGNEYGAPARLVTTGARQHPRSIGYEQMASIMAHDREHPYLIVFGTGWGLTEDFFDR ADFVLAPIQGPGEYNHLSVRSAAAIIMDRLFGVR >Mature_193_residues TCGECSRPAVSVALVHYPVYDKNRQVVATAVTNLDIHDISRSARTFGLNHYYLVTPVEGQKELAGRIIRHWREGWGASYN PKRKAALDLVRISNSIEEVLEELGNEYGAPARLVTTGARQHPRSIGYEQMASIMAHDREHPYLIVFGTGWGLTEDFFDRA DFVLAPIQGPGEYNHLSVRSAAAIIMDRLFGVR
Specific function: Unknown
COG id: COG4752
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To A.aeolicus AQ_054 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019230 [H]
Pfam domain/function: PF09936 DUF2168 [H]
EC number: NA
Molecular weight: Translated: 21725; Mature: 21594
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCGECSRPAVSVALVHYPVYDKNRQVVATAVTNLDIHDISRSARTFGLNHYYLVTPVEG CCCCCCCCCCEEEEEEEECEECCCCEEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCC QKELAGRIIRHWREGWGASYNPKRKAALDLVRISNSIEEVLEELGNEYGAPARLVTTGAR HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC QHPRSIGYEQMASIMAHDREHPYLIVFGTGWGLTEDFFDRADFVLAPIQGPGEYNHLSVR CCCHHCCHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHCCCCEEEEECCCCCCCCEEHHH SAAAIIMDRLFGVR HHHHHHHHHHHCCC >Mature Secondary Structure TCGECSRPAVSVALVHYPVYDKNRQVVATAVTNLDIHDISRSARTFGLNHYYLVTPVEG CCCCCCCCCEEEEEEEECEECCCCEEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCC QKELAGRIIRHWREGWGASYNPKRKAALDLVRISNSIEEVLEELGNEYGAPARLVTTGAR HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC QHPRSIGYEQMASIMAHDREHPYLIVFGTGWGLTEDFFDRADFVLAPIQGPGEYNHLSVR CCCHHCCHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHCCCCEEEEECCCCCCCCEEHHH SAAAIIMDRLFGVR HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]