| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995701
Identifier: 39995701
GI number: 39995701
Start: 626203
End: 627252
Strand: Reverse
Name: 39995701
Synonym: GSU0594
Alternate gene names: NA
Gene position: 627252-626203 (Counterclockwise)
Preceding gene: 39995703
Following gene: 39995700
Centisome position: 16.45
GC content: 58.67
Gene sequence:
>1050_bases ATGCGCACCCTACGGAAGACGGCAATTGTGCTGTCGCTCCTCGCGATACTCCCCGCCGCGGCTCTGGCTGAAGACAAAAC GGCCGATGCCTGCCTCAGCTGCCACAGCAGTAAGGATATCGGGAAGAGCGGTTCCCACCTCTATATTGATGCCGCAAAAT ACAGCCGTACCACCCACGCCATCATCGGCTGCACCTCGTGTCATGACAGTGTCACTGCGAGCCACCCCGACGATGGCATC CGCCCCTCACGGGCTGCGTGCCGTGAATGCCATTCACCGATCGCCAAAGAATACACCGCGAGCCTCCACGCCAATAATGC CGGCTGCGCGGACTGCCACGACCCCCATACGGTGAAGCCGCCCGCCCTGACTTCCGGCCGGGACATGAACGCCATGTGCG CTAAATGCCATGAGACGGCAAAAATGATCGAAGTTCACAGCAAATGGCTTCCTCAGGCGGATCTGCATATCGATGCTCTG CCGTGCATCACCTGCCACACCGGTTCCGAAAACTACGTGATCACCTTGTACATCCAGAAGCGGGCCGGGGAAAAACCCCA GAGCGACTTCAAAACGGCGACCTATGAAGATCTCTCCCGCACCCTCCCCGGCGACCGGGACGTGAAGGCGATCATCGACA CCAATAACGACAACTACATCTCATTGGCCGAGCTGCGCTCGTTCAACAAAAGCGCCAGACACGACGGCATGAGACTCTGG GGGATGATGACCCCTGAAAAAGTGACCCACACCTACCAGATTCTGGATAACCGCTGGGACTGCACCTTCTGTCACGCATC GGGTCCCCGGGCAATGCAGACGAGCTTCGTCGCATTCCCCGACAAAAACGGCACCTACAGCCGCGTTGCGGTTGAAAAAG GTGCGGTCCTCGACCTTCTCTACGGGACCCCCGACTTCTACATGATGGGCTCCACCCGCAGCATGGCACTGTCCATCATC GGCGGACTGATAGTAAGCGGCGGCATCGCCTTCGCGGGGATTCACGGGACCTTCAGATTCCTGACCAGGAAAAACAGAAA GGAGCACTGA
Upstream 100 bases:
>100_bases ACGCCACTAGCCAATCGGCGCGGGAGCGACACCTCCGCGCGCCACGGAGCCCGGCCGGCCCTTGGGGGCCGGCCCCGACA TCACTTCAAGGAGGCACACG
Downstream 100 bases:
>100_bases GCCATGAGCGCCCATAACGAGCATGCCGAACATAAGGAATTCATCTACCTCACCCCGATGCCGATCAGGATCTGGCACTG GATCAACGCCCTCGGGATCG
Product: cytochrome C
Products: NA
Alternate protein names: Multiheme Cytochrome; Cytochrome C
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MRTLRKTAIVLSLLAILPAAALAEDKTADACLSCHSSKDIGKSGSHLYIDAAKYSRTTHAIIGCTSCHDSVTASHPDDGI RPSRAACRECHSPIAKEYTASLHANNAGCADCHDPHTVKPPALTSGRDMNAMCAKCHETAKMIEVHSKWLPQADLHIDAL PCITCHTGSENYVITLYIQKRAGEKPQSDFKTATYEDLSRTLPGDRDVKAIIDTNNDNYISLAELRSFNKSARHDGMRLW GMMTPEKVTHTYQILDNRWDCTFCHASGPRAMQTSFVAFPDKNGTYSRVAVEKGAVLDLLYGTPDFYMMGSTRSMALSII GGLIVSGGIAFAGIHGTFRFLTRKNRKEH
Sequences:
>Translated_349_residues MRTLRKTAIVLSLLAILPAAALAEDKTADACLSCHSSKDIGKSGSHLYIDAAKYSRTTHAIIGCTSCHDSVTASHPDDGI RPSRAACRECHSPIAKEYTASLHANNAGCADCHDPHTVKPPALTSGRDMNAMCAKCHETAKMIEVHSKWLPQADLHIDAL PCITCHTGSENYVITLYIQKRAGEKPQSDFKTATYEDLSRTLPGDRDVKAIIDTNNDNYISLAELRSFNKSARHDGMRLW GMMTPEKVTHTYQILDNRWDCTFCHASGPRAMQTSFVAFPDKNGTYSRVAVEKGAVLDLLYGTPDFYMMGSTRSMALSII GGLIVSGGIAFAGIHGTFRFLTRKNRKEH >Mature_349_residues MRTLRKTAIVLSLLAILPAAALAEDKTADACLSCHSSKDIGKSGSHLYIDAAKYSRTTHAIIGCTSCHDSVTASHPDDGI RPSRAACRECHSPIAKEYTASLHANNAGCADCHDPHTVKPPALTSGRDMNAMCAKCHETAKMIEVHSKWLPQADLHIDAL PCITCHTGSENYVITLYIQKRAGEKPQSDFKTATYEDLSRTLPGDRDVKAIIDTNNDNYISLAELRSFNKSARHDGMRLW GMMTPEKVTHTYQILDNRWDCTFCHASGPRAMQTSFVAFPDKNGTYSRVAVEKGAVLDLLYGTPDFYMMGSTRSMALSII GGLIVSGGIAFAGIHGTFRFLTRKNRKEH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38250; Mature: 38250
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: PS00018 EF_HAND_1 ; PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTLRKTAIVLSLLAILPAAALAEDKTADACLSCHSSKDIGKSGSHLYIDAAKYSRTTHA CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCEEEEEHHHCCCCEEE IIGCTSCHDSVTASHPDDGIRPSRAACRECHSPIAKEYTASLHANNAGCADCHDPHTVKP EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCC PALTSGRDMNAMCAKCHETAKMIEVHSKWLPQADLHIDALPCITCHTGSENYVITLYIQK CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECEEEEEEECCCCCEEEEEEEEC RAGEKPQSDFKTATYEDLSRTLPGDRDVKAIIDTNNDNYISLAELRSFNKSARHDGMRLW CCCCCCCHHCCHHHHHHHHHHCCCCCCEEEEEECCCCCEEEHHHHHHCCHHHHCCCEEEE GMMTPEKVTHTYQILDNRWDCTFCHASGPRAMQTSFVAFPDKNGTYSRVAVEKGAVLDLL ECCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHEEEEEECCCCCCEEEEEECCCCEEEEE YGTPDFYMMGSTRSMALSIIGGLIVSGGIAFAGIHGTFRFLTRKNRKEH ECCCCEEEECCCHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHCCCCCC >Mature Secondary Structure MRTLRKTAIVLSLLAILPAAALAEDKTADACLSCHSSKDIGKSGSHLYIDAAKYSRTTHA CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCEEEEEHHHCCCCEEE IIGCTSCHDSVTASHPDDGIRPSRAACRECHSPIAKEYTASLHANNAGCADCHDPHTVKP EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCC PALTSGRDMNAMCAKCHETAKMIEVHSKWLPQADLHIDALPCITCHTGSENYVITLYIQK CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECEEEEEEECCCCCEEEEEEEEC RAGEKPQSDFKTATYEDLSRTLPGDRDVKAIIDTNNDNYISLAELRSFNKSARHDGMRLW CCCCCCCHHCCHHHHHHHHHHCCCCCCEEEEEECCCCCEEEHHHHHHCCHHHHCCCEEEE GMMTPEKVTHTYQILDNRWDCTFCHASGPRAMQTSFVAFPDKNGTYSRVAVEKGAVLDLL ECCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHEEEEEECCCCCCEEEEEECCCCEEEEE YGTPDFYMMGSTRSMALSIIGGLIVSGGIAFAGIHGTFRFLTRKNRKEH ECCCCEEEECCCHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA