| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995698
Identifier: 39995698
GI number: 39995698
Start: 623398
End: 624249
Strand: Reverse
Name: 39995698
Synonym: GSU0591
Alternate gene names: NA
Gene position: 624249-623398 (Counterclockwise)
Preceding gene: 39995699
Following gene: 39995697
Centisome position: 16.37
GC content: 61.03
Gene sequence:
>852_bases ATGCCCCGGAGTTTCGCCGCAAAAGCCATCGTCCCGCCGGCTATTGCCGTAACAGGGTTCGTCATTGTCTGCTGCATCCT CCTTTACTCGGTCATCAAGACCGACATGCTGAATGATGCCATCCAGCATGAGACCAATCTGGCGGATACCATCGTCAAGT CGGCGCGCTATGCCATGCTCAAGGACGACCGGGAAACCCTGCGCAACATCATTGACAACGTGGGGCAGCAGAAAGGAGTC GAGCACGCCCGCATCTTCAACAAAAAAGGGGTGATCATGTTTTCGGCCCACCCCGAGGACATCGGAAAACTCCTGGACAA AAAGGAGGCGGGATGCGTGGCCTGCCACTCCGGCCCGGTTCCCCTCACCAGCATGGGGCGTATGGATCAAGCGCGCCGCT TCATCAATGAAAAGGGGCGGCACGTCATCGCCATAACCGTTCCCGTCTACAATGAGCCCGAATGTTTCAACGCAGCGTGC CACGTTCACAGCCCGAGCCAGAAGGTGCTCGGCACCCTCGACATAGGCCTGTCCGAAGCCCCGCTTCAGAAAACCCTCAA CGTCATGCAGGGGAGGATGATCGTCTTCTGCCTGATGGTGCTGTTGCTGACCGTGGGAGGGGTCTCGGCCCTGCTGCGCC GGAATGTGCTGCTGCCGGTCCGGGAACTGGCCGATTACGTCTCCGCCGTCAAGAGGGGAGACCTGAGCCGTAAGGCACCA GCCTACCGCGATGAAGTGGGAGAGCTGGCCCGGGCCTACCAGGAGTTGGCCCACCAGTTGAAAGAGCGGCGCGAGTCACC GGACGAGGCCACCCAAGACGGACCGGCCGGCGACCGCGGGAACCGCTCCTGA
Upstream 100 bases:
>100_bases TAACCAGCTACGAAAAGGGCGGGGGAGCGTACCCCGCCCTTGCATTTTGTGTAATTGAGGATAACCTTCAACATGAAAAC CTTTTTTTAAAGGAGCCCTC
Downstream 100 bases:
>100_bases CGCCGTCGTCAGGCCAGCGCATCGAAACGGCACCCATGAAGCGAACAACCGAACGTTCCCCCTCACACGACAATGGCATT TCACCGCCCAACCGCGACCT
Product: cytochrome C
Products: NA
Alternate protein names: Sensor Histidine Kinase; PAS/PAC Sensor Signal Transduction Histidine Kinase; Periplasmic Sensor Signal Transduction Histidine Kinase; Multi-Sensor Signal Transduction Histidine Kinase; PAS Sensor Protein; Sensory Box Histidine Kinase; HAMP Domain-Containing Sensor Histidine Kinase; Histidine Kinase HAMP Region Domain Protein; Cytochrome C Family Protein; Cytochrome C; Sensory Box Histidine Kinase And Response Regulator Protein; Histidine Kinase HAMP Region
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MPRSFAAKAIVPPAIAVTGFVIVCCILLYSVIKTDMLNDAIQHETNLADTIVKSARYAMLKDDRETLRNIIDNVGQQKGV EHARIFNKKGVIMFSAHPEDIGKLLDKKEAGCVACHSGPVPLTSMGRMDQARRFINEKGRHVIAITVPVYNEPECFNAAC HVHSPSQKVLGTLDIGLSEAPLQKTLNVMQGRMIVFCLMVLLLTVGGVSALLRRNVLLPVRELADYVSAVKRGDLSRKAP AYRDEVGELARAYQELAHQLKERRESPDEATQDGPAGDRGNRS
Sequences:
>Translated_283_residues MPRSFAAKAIVPPAIAVTGFVIVCCILLYSVIKTDMLNDAIQHETNLADTIVKSARYAMLKDDRETLRNIIDNVGQQKGV EHARIFNKKGVIMFSAHPEDIGKLLDKKEAGCVACHSGPVPLTSMGRMDQARRFINEKGRHVIAITVPVYNEPECFNAAC HVHSPSQKVLGTLDIGLSEAPLQKTLNVMQGRMIVFCLMVLLLTVGGVSALLRRNVLLPVRELADYVSAVKRGDLSRKAP AYRDEVGELARAYQELAHQLKERRESPDEATQDGPAGDRGNRS >Mature_282_residues PRSFAAKAIVPPAIAVTGFVIVCCILLYSVIKTDMLNDAIQHETNLADTIVKSARYAMLKDDRETLRNIIDNVGQQKGVE HARIFNKKGVIMFSAHPEDIGKLLDKKEAGCVACHSGPVPLTSMGRMDQARRFINEKGRHVIAITVPVYNEPECFNAACH VHSPSQKVLGTLDIGLSEAPLQKTLNVMQGRMIVFCLMVLLLTVGGVSALLRRNVLLPVRELADYVSAVKRGDLSRKAPA YRDEVGELARAYQELAHQLKERRESPDEATQDGPAGDRGNRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31124; Mature: 30992
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: PS50885 HAMP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRSFAAKAIVPPAIAVTGFVIVCCILLYSVIKTDMLNDAIQHETNLADTIVKSARYAML CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDDRETLRNIIDNVGQQKGVEHARIFNKKGVIMFSAHPEDIGKLLDKKEAGCVACHSGPV HCHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCEEEECCCCC PLTSMGRMDQARRFINEKGRHVIAITVPVYNEPECFNAACHVHSPSQKVLGTLDIGLSEA CHHHHCCHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCHH PLQKTLNVMQGRMIVFCLMVLLLTVGGVSALLRRNVLLPVRELADYVSAVKRGDLSRKAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC AYRDEVGELARAYQELAHQLKERRESPDEATQDGPAGDRGNRS HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCC >Mature Secondary Structure PRSFAAKAIVPPAIAVTGFVIVCCILLYSVIKTDMLNDAIQHETNLADTIVKSARYAML CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDDRETLRNIIDNVGQQKGVEHARIFNKKGVIMFSAHPEDIGKLLDKKEAGCVACHSGPV HCHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCEEEECCCCC PLTSMGRMDQARRFINEKGRHVIAITVPVYNEPECFNAACHVHSPSQKVLGTLDIGLSEA CHHHHCCHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCHH PLQKTLNVMQGRMIVFCLMVLLLTVGGVSALLRRNVLLPVRELADYVSAVKRGDLSRKAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC AYRDEVGELARAYQELAHQLKERRESPDEATQDGPAGDRGNRS HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA