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The map label for this gene is yddQ [H]

Identifier: 39995676

GI number: 39995676

Start: 598373

End: 598921

Strand: Direct

Name: yddQ [H]

Synonym: GSU0569

Alternate gene names: 39995676

Gene position: 598373-598921 (Clockwise)

Preceding gene: 39995675

Following gene: 39995677

Centisome position: 15.69

GC content: 65.57

Gene sequence:

>549_bases
ATGAAACGCGCACTGCTGGTTATCGACGTCCAGAACGAATATTTCACCGGCGCCCTGCCGGTCAGCTATCCGGAGGGGAG
CTTCCCCAACATCCTGGCGGCCATGGATACTGCCACGGCCAACGGGATTCCGGTGGTGGTGGTCCGCCATGCGTCTCGGC
GGCCCGATTCGGCTACGTTCCGGCCGGGCTCTCCCGGGTGGGAGCTGCACCCCGAGGTGGCGCGGCGGCCCTTCGATCTG
CTGCTGGAAAAGAACCTGCCCGGCAGCTTCACGGATACGAACCTGGAGGCCTGGCTCAGGGAGCGGGGGATCGACACCCT
GGTCATCAGCGGCTACATGACCCAGATGTGCTGCGATACCACCTCTCGCCAGGCGTTTCACCGGGGCTTTGCCGTGGAGT
TTCTCGCCGACGCCACCGGCACCCTGGCCTTTGCTAACAGCGCGGGCGCGGTCACTGCCGAGGAGCTGCACCGGGCGGTG
CTCGTGACCCAGCAACTGATGTTCGCCACGGTGATGACCACCGGGGAATGGATCGGCTCGTTCCGCTGA

Upstream 100 bases:

>100_bases
GGTGCTGCTGGTGATCGCGGCGGCCCCGTACTTGGCGGCCCGGTTGCGGGGGCTGGTGTAGCGGGGGCCACGGGCTCCAC
GAATCAAGGGAGGCTACGGA

Downstream 100 bases:

>100_bases
AGCTGCCACCTCGTCCTGCCGGAGCAAAGGAGAACGAACCATGTCCGATGTCACGAACACGTGGAATGAACGATACGATA
CTGAGGAATTCGTCTACGGC

Product: isochorismatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MKRALLVIDVQNEYFTGALPVSYPEGSFPNILAAMDTATANGIPVVVVRHASRRPDSATFRPGSPGWELHPEVARRPFDL
LLEKNLPGSFTDTNLEAWLRERGIDTLVISGYMTQMCCDTTSRQAFHRGFAVEFLADATGTLAFANSAGAVTAEELHRAV
LVTQQLMFATVMTTGEWIGSFR

Sequences:

>Translated_182_residues
MKRALLVIDVQNEYFTGALPVSYPEGSFPNILAAMDTATANGIPVVVVRHASRRPDSATFRPGSPGWELHPEVARRPFDL
LLEKNLPGSFTDTNLEAWLRERGIDTLVISGYMTQMCCDTTSRQAFHRGFAVEFLADATGTLAFANSAGAVTAEELHRAV
LVTQQLMFATVMTTGEWIGSFR
>Mature_182_residues
MKRALLVIDVQNEYFTGALPVSYPEGSFPNILAAMDTATANGIPVVVVRHASRRPDSATFRPGSPGWELHPEVARRPFDL
LLEKNLPGSFTDTNLEAWLRERGIDTLVISGYMTQMCCDTTSRQAFHRGFAVEFLADATGTLAFANSAGAVTAEELHRAV
LVTQQLMFATVMTTGEWIGSFR

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 19966; Mature: 19966

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRALLVIDVQNEYFTGALPVSYPEGSFPNILAAMDTATANGIPVVVVRHASRRPDSATF
CCCEEEEEEECCCEEECCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCC
RPGSPGWELHPEVARRPFDLLLEKNLPGSFTDTNLEAWLRERGIDTLVISGYMTQMCCDT
CCCCCCCCCCHHHHCCCHHHEEECCCCCCCCCCCHHHHHHHCCCCEEEEHHHHHHHHHCC
TSRQAFHRGFAVEFLADATGTLAFANSAGAVTAEELHRAVLVTQQLMFATVMTTGEWIGS
HHHHHHHCCHHEEEECCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FR
CC
>Mature Secondary Structure
MKRALLVIDVQNEYFTGALPVSYPEGSFPNILAAMDTATANGIPVVVVRHASRRPDSATF
CCCEEEEEEECCCEEECCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCC
RPGSPGWELHPEVARRPFDLLLEKNLPGSFTDTNLEAWLRERGIDTLVISGYMTQMCCDT
CCCCCCCCCCHHHHCCCHHHEEECCCCCCCCCCCHHHHHHHCCCCEEEEHHHHHHHHHCC
TSRQAFHRGFAVEFLADATGTLAFANSAGAVTAEELHRAVLVTQQLMFATVMTTGEWIGS
HHHHHHHCCHHEEEECCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]