| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995671
Identifier: 39995671
GI number: 39995671
Start: 595484
End: 596707
Strand: Direct
Name: 39995671
Synonym: GSU0564
Alternate gene names: NA
Gene position: 595484-596707 (Clockwise)
Preceding gene: 39995670
Following gene: 308513282
Centisome position: 15.61
GC content: 43.38
Gene sequence:
>1224_bases ATGAGCGCATGGGAAAAATTCAAAAATAAATTCGGCAAGATCAGAACCCACCTCACAAGCTTGGATGATCAGCCATTAGG TAAAGCTGCGCTTGTAATCATTATTTTCCTGGATGTTTTCATCCTTGTTTCCATTTTTAACGGACTCGAAGCACACACTA GGCAGCTTTCATCCCCTGACGACTACATCCCTAATGCCTGCCGTGAGATCATAGTCAATCGCCAATGGAATCCTACTAAC CGGATTGACAACATTTCGCAAATCATCATTGCTTCAAGCACAACCTATTACCGGGGCGAGGAAAGGAAACGCGAACAGCA TCCTGTCTGTGTGCCCTATAGTGATCTTGTTGACCAAATCAAAAGCGATAAGGTGCTTGTCGGCATCTTCGAAGAGCGGA GTAAGGCTGAACGTGAGGCACGCGAGCTACAAAGAGAAATTGACAATCTGAAAGGAGCTTACGATACGTCCCTGCTCGAA ACCATTGCGAAAAAGCAGGAAAGTCAAACCAAAGTAGCCGCGATAAAGGAAGATTTTCTAAAGAAGAGTGCTGCCCTTGA TACGTTGAAAGCAAAAATTGCATCTTTGGAACAGTCGATTAACGGTGACCCGAAAATAAAGCTTCTCTGGGAAAAACTGC AAACCTTGCAAGAGCAGGACAGACAAAAACTGCTATCCGACCTGCGAACGATAAATTTCTGGTACCCAGTTAAAAGACTT GGAATGCAGTTGATGTTCCTGATTCCGCTTTTCATTGCTTTTTACCTCTGGAACAGCACAAGCATAAGGAAAAGCCGGGG AATACAGACTCTCGTATCTTCGCACCTTCTTGGCGTATCATGTATTCCGATCCTTTTTAAAATCACCGAAGCTGTCTATG ACATAATTCCTAAAAAACTGTTGAAGCAACTGATTGATTTCTTGGAATCATTTAAGCTCATAGCATTATGGCACTACATT GTAATTGCTATCTCGGTGGGTGTTTCACTTCTTTTAATATACATCATTCAGAAAAAGCTTTTCTCCAGTGAAAGAATCGG CAGAATAATTGAGCGCCGGATTTCCAATGGAGACTGCCAACAATGTGGAAAGCATTTGCCAAGCGGGTCATCAGCTTGTC CTTTCTGTGGTTTTGGCCAGTATAAGCTATGCAGCCATTGCCAGAAGCAGATGCATGTATATGGCAAATTTTGCCGAGAA TGTGGCCAGAAGGCGACTGACTGA
Upstream 100 bases:
>100_bases ATGTCGAGTAAAAAGTCCAACCAGGAAGTTGGACCAGCCGAGCTGGTCAACTCCCCGCCCAACTGGGCGCAATCAAATTT ACTGACAAGCAGAGGCGACT
Downstream 100 bases:
>100_bases CGCGAAGCCAAGGCACAACGAGGCGGCACTCAGTCGGCGCGATAAACCTGCACCAGGTCACCGGCCGCCCCGTTGATTGT TACAGAACCAACCGCACCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MSAWEKFKNKFGKIRTHLTSLDDQPLGKAALVIIIFLDVFILVSIFNGLEAHTRQLSSPDDYIPNACREIIVNRQWNPTN RIDNISQIIIASSTTYYRGEERKREQHPVCVPYSDLVDQIKSDKVLVGIFEERSKAEREARELQREIDNLKGAYDTSLLE TIAKKQESQTKVAAIKEDFLKKSAALDTLKAKIASLEQSINGDPKIKLLWEKLQTLQEQDRQKLLSDLRTINFWYPVKRL GMQLMFLIPLFIAFYLWNSTSIRKSRGIQTLVSSHLLGVSCIPILFKITEAVYDIIPKKLLKQLIDFLESFKLIALWHYI VIAISVGVSLLLIYIIQKKLFSSERIGRIIERRISNGDCQQCGKHLPSGSSACPFCGFGQYKLCSHCQKQMHVYGKFCRE CGQKATD
Sequences:
>Translated_407_residues MSAWEKFKNKFGKIRTHLTSLDDQPLGKAALVIIIFLDVFILVSIFNGLEAHTRQLSSPDDYIPNACREIIVNRQWNPTN RIDNISQIIIASSTTYYRGEERKREQHPVCVPYSDLVDQIKSDKVLVGIFEERSKAEREARELQREIDNLKGAYDTSLLE TIAKKQESQTKVAAIKEDFLKKSAALDTLKAKIASLEQSINGDPKIKLLWEKLQTLQEQDRQKLLSDLRTINFWYPVKRL GMQLMFLIPLFIAFYLWNSTSIRKSRGIQTLVSSHLLGVSCIPILFKITEAVYDIIPKKLLKQLIDFLESFKLIALWHYI VIAISVGVSLLLIYIIQKKLFSSERIGRIIERRISNGDCQQCGKHLPSGSSACPFCGFGQYKLCSHCQKQMHVYGKFCRE CGQKATD >Mature_406_residues SAWEKFKNKFGKIRTHLTSLDDQPLGKAALVIIIFLDVFILVSIFNGLEAHTRQLSSPDDYIPNACREIIVNRQWNPTNR IDNISQIIIASSTTYYRGEERKREQHPVCVPYSDLVDQIKSDKVLVGIFEERSKAEREARELQREIDNLKGAYDTSLLET IAKKQESQTKVAAIKEDFLKKSAALDTLKAKIASLEQSINGDPKIKLLWEKLQTLQEQDRQKLLSDLRTINFWYPVKRLG MQLMFLIPLFIAFYLWNSTSIRKSRGIQTLVSSHLLGVSCIPILFKITEAVYDIIPKKLLKQLIDFLESFKLIALWHYIV IAISVGVSLLLIYIIQKKLFSSERIGRIIERRISNGDCQQCGKHLPSGSSACPFCGFGQYKLCSHCQKQMHVYGKFCREC GQKATD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46636; Mature: 46505
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAWEKFKNKFGKIRTHLTSLDDQPLGKAALVIIIFLDVFILVSIFNGLEAHTRQLSSPD CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DYIPNACREIIVNRQWNPTNRIDNISQIIIASSTTYYRGEERKREQHPVCVPYSDLVDQI CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCHHHHHHHH KSDKVLVGIFEERSKAEREARELQREIDNLKGAYDTSLLETIAKKQESQTKVAAIKEDFL CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKSAALDTLKAKIASLEQSINGDPKIKLLWEKLQTLQEQDRQKLLSDLRTINFWYPVKRL HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GMQLMFLIPLFIAFYLWNSTSIRKSRGIQTLVSSHLLGVSCIPILFKITEAVYDIIPKKL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKQLIDFLESFKLIALWHYIVIAISVGVSLLLIYIIQKKLFSSERIGRIIERRISNGDCQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH QCGKHLPSGSSACPFCGFGQYKLCSHCQKQMHVYGKFCRECGQKATD HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SAWEKFKNKFGKIRTHLTSLDDQPLGKAALVIIIFLDVFILVSIFNGLEAHTRQLSSPD CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DYIPNACREIIVNRQWNPTNRIDNISQIIIASSTTYYRGEERKREQHPVCVPYSDLVDQI CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCHHHHHHHH KSDKVLVGIFEERSKAEREARELQREIDNLKGAYDTSLLETIAKKQESQTKVAAIKEDFL CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKSAALDTLKAKIASLEQSINGDPKIKLLWEKLQTLQEQDRQKLLSDLRTINFWYPVKRL HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GMQLMFLIPLFIAFYLWNSTSIRKSRGIQTLVSSHLLGVSCIPILFKITEAVYDIIPKKL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKQLIDFLESFKLIALWHYIVIAISVGVSLLLIYIIQKKLFSSERIGRIIERRISNGDCQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH QCGKHLPSGSSACPFCGFGQYKLCSHCQKQMHVYGKFCRECGQKATD HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA