| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is cat1 [H]
Identifier: 39995598
GI number: 39995598
Start: 521516
End: 523111
Strand: Direct
Name: cat1 [H]
Synonym: GSU0490
Alternate gene names: 39995598
Gene position: 521516-523111 (Clockwise)
Preceding gene: 39995597
Following gene: 39995601
Centisome position: 13.67
GC content: 60.09
Gene sequence:
>1596_bases ATGTCAGAGTACGGCACACTGCAGGACCGCGTACGTTGCAAGTCACTGCTCAACAAGGTTATGTCGGCCGAGGAGACTAT CCAGTTCTTCAAGCCGGGCATGAACCTTGGCTGGTCCGGCTTCACCCCGGCAGGTTATCCTAAGGCAGTGCCCATCGCAC TGGCAGATCACGTTGAGAAGAACAGCCTGCAGGGCAAGATGAAGTTCAACCTCTTCATCGGCGCCTCCGTCGGGGCCGAA ACCGAAGACCGCTGGGCCACTCTCGACATGATCGACCGTCGCTGGCCGTATCAGACCGGTAAGAACATCGCCGCCGGCAT CAACGAGGGCCGCATCCGGATGGGTGACAAGCACCTCTCCCTCTTTGCCCAGGATCTGGGCTACGGCTTCTACACCAAGG ACAGCGAAACCGGCAAGCTTGACCTCGCCATCATCGAGGTTTCCGCCATCACCGAAGACGGCGGACTGGTCCCCACCACC TCTTGCGGCGTTATTCCCGAGATCCTCATGATCTGCGACAAGATCATCGTGGAAGTGAACACCGGTCAGCCCTCCTTCGA GGGGATGCACGACATCGTCGTCTGCAACCACCCCCCGAAGCGCCAGATTCTGGGCATCACCCATGCCGGTGAGCGGATCG GTACAACCTACGTACCGTGCGACCCGAGCAAGATCATCGCCGTGGTTGAGTCCAAGTACCGTGACAAGGGGCGTGCCTTC TCCGAGCAGGACGACACCTCCGAGGCCATTGCCAACAACATCATCGACTTCTTCAGCCATGAAGTAAAGATGGGTCGTCT GCCCAAGAACCTGCTTCCGCTCCAGTCAGGCGTCGGTTCCATCGCCAACGCTGTAATCGGCGGCCTGGCCAAGGGTCCTT TCTCCAACCTGACCGTTTACACCGAAGTTCTCCAGGACACCATGCTCGACCTGTTCGATTCGGGCAAGCTGGATGCCGCT TCCTCCTGCTCCCTCTCTCTCTCCGAGACCCCGGGCTTCCCCCGTTTCTTCGAGAACTGGGAGAAGTACTTCGACAAGAT CACCCTGCGTCCGCTCTCCATCTCCAACGCACCGGAGCCGATCCGCCGTCTCGGGTGCATCGCCATGAACACCCCGGTCG AGATCGACATCTATGCCCACGCCAACTCCACGCTGGTCGGCGGCACACGGATGATCAACGGCCTCGGCGGTTCCGGCGAC TTCCTTCGCAACGGCTTCTTGAAGATCATGCACACTCCGTCGAGCCGTCCATCCAAGACCGACCCGACCGGTATCTCCTG CGTGGTGCCGCACTGCTCCCACATCGACCACACCGAGCACGATCTGGACTGCGTGGTCACCGAGCAGGGTCTGGCCGACC TCCGTGGTCTGGCACCGAAGGATCGCGCAAAGCGGATTATCGAGAAGTGCGCCCACCCGGACTACAAGCCGATTCTCAGC GAGTACTTGGCAATCGCCAGTGCCGATTGCCTCAAGCGCAAGGTGGGCCACGAGCCGCAACTGTGGGACCGCGCCTTCAA GATGCACCTCAACCTGGAGCGCAACGGCACCATGAAGATCAAGAACTGGGACGTGAAGGTCGATCTCTGCGAGTAA
Upstream 100 bases:
>100_bases AGCGTTCAGTAGCGTTGATGTTATGCAAATGAGGTAACGGCGAAGTTTCGTTAAGCCGCAGAACGTCGCTGTAAACAACA AAACAGAACGGAGGTAAGAG
Downstream 100 bases:
>100_bases GGTCGACAGTCAGTATCAGGCATGAAAAAAGCCCCGCCGAACTTCGGCGGGGCTTTTTCGTATCTCTCAACGGGGGAAAA CGGGAACGGTATCCCCTGGC
Product: acetyl-CoA hydrolase/transferase
Products: propionate; succinyl-CoA [C]
Alternate protein names: NA
Number of amino acids: Translated: 531; Mature: 530
Protein sequence:
>531_residues MSEYGTLQDRVRCKSLLNKVMSAEETIQFFKPGMNLGWSGFTPAGYPKAVPIALADHVEKNSLQGKMKFNLFIGASVGAE TEDRWATLDMIDRRWPYQTGKNIAAGINEGRIRMGDKHLSLFAQDLGYGFYTKDSETGKLDLAIIEVSAITEDGGLVPTT SCGVIPEILMICDKIIVEVNTGQPSFEGMHDIVVCNHPPKRQILGITHAGERIGTTYVPCDPSKIIAVVESKYRDKGRAF SEQDDTSEAIANNIIDFFSHEVKMGRLPKNLLPLQSGVGSIANAVIGGLAKGPFSNLTVYTEVLQDTMLDLFDSGKLDAA SSCSLSLSETPGFPRFFENWEKYFDKITLRPLSISNAPEPIRRLGCIAMNTPVEIDIYAHANSTLVGGTRMINGLGGSGD FLRNGFLKIMHTPSSRPSKTDPTGISCVVPHCSHIDHTEHDLDCVVTEQGLADLRGLAPKDRAKRIIEKCAHPDYKPILS EYLAIASADCLKRKVGHEPQLWDRAFKMHLNLERNGTMKIKNWDVKVDLCE
Sequences:
>Translated_531_residues MSEYGTLQDRVRCKSLLNKVMSAEETIQFFKPGMNLGWSGFTPAGYPKAVPIALADHVEKNSLQGKMKFNLFIGASVGAE TEDRWATLDMIDRRWPYQTGKNIAAGINEGRIRMGDKHLSLFAQDLGYGFYTKDSETGKLDLAIIEVSAITEDGGLVPTT SCGVIPEILMICDKIIVEVNTGQPSFEGMHDIVVCNHPPKRQILGITHAGERIGTTYVPCDPSKIIAVVESKYRDKGRAF SEQDDTSEAIANNIIDFFSHEVKMGRLPKNLLPLQSGVGSIANAVIGGLAKGPFSNLTVYTEVLQDTMLDLFDSGKLDAA SSCSLSLSETPGFPRFFENWEKYFDKITLRPLSISNAPEPIRRLGCIAMNTPVEIDIYAHANSTLVGGTRMINGLGGSGD FLRNGFLKIMHTPSSRPSKTDPTGISCVVPHCSHIDHTEHDLDCVVTEQGLADLRGLAPKDRAKRIIEKCAHPDYKPILS EYLAIASADCLKRKVGHEPQLWDRAFKMHLNLERNGTMKIKNWDVKVDLCE >Mature_530_residues SEYGTLQDRVRCKSLLNKVMSAEETIQFFKPGMNLGWSGFTPAGYPKAVPIALADHVEKNSLQGKMKFNLFIGASVGAET EDRWATLDMIDRRWPYQTGKNIAAGINEGRIRMGDKHLSLFAQDLGYGFYTKDSETGKLDLAIIEVSAITEDGGLVPTTS CGVIPEILMICDKIIVEVNTGQPSFEGMHDIVVCNHPPKRQILGITHAGERIGTTYVPCDPSKIIAVVESKYRDKGRAFS EQDDTSEAIANNIIDFFSHEVKMGRLPKNLLPLQSGVGSIANAVIGGLAKGPFSNLTVYTEVLQDTMLDLFDSGKLDAAS SCSLSLSETPGFPRFFENWEKYFDKITLRPLSISNAPEPIRRLGCIAMNTPVEIDIYAHANSTLVGGTRMINGLGGSGDF LRNGFLKIMHTPSSRPSKTDPTGISCVVPHCSHIDHTEHDLDCVVTEQGLADLRGLAPKDRAKRIIEKCAHPDYKPILSE YLAIASADCLKRKVGHEPQLWDRAFKMHLNLERNGTMKIKNWDVKVDLCE
Specific function: Forms succinyl-CoA from succinate and acetyl-CoA [H]
COG id: COG0427
COG function: function code C; Acetyl-CoA hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetyl-CoA hydrolase/transferase family [H]
Homologues:
Organism=Escherichia coli, GI1789287, Length=502, Percent_Identity=41.0358565737052, Blast_Score=382, Evalue=1e-107, Organism=Saccharomyces cerevisiae, GI6319456, Length=525, Percent_Identity=57.1428571428571, Blast_Score=606, Evalue=1e-174,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003702 - InterPro: IPR006472 - InterPro: IPR017821 [H]
Pfam domain/function: PF02550 AcetylCoA_hydro; PF04223 CitF [H]
EC number: NA
Molecular weight: Translated: 58504; Mature: 58372
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEYGTLQDRVRCKSLLNKVMSAEETIQFFKPGMNLGWSGFTPAGYPKAVPIALADHVEK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH NSLQGKMKFNLFIGASVGAETEDRWATLDMIDRRWPYQTGKNIAAGINEGRIRMGDKHLS CCCCCEEEEEEEEECCCCCCCCCCEEHHHHHHCCCCCCCCCCCCCCCCCCCEEECHHHHH LFAQDLGYGFYTKDSETGKLDLAIIEVSAITEDGGLVPTTSCGVIPEILMICDKIIVEVN HHHHHHCCCEEECCCCCCEEEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHEEEEC TGQPSFEGMHDIVVCNHPPKRQILGITHAGERIGTTYVPCDPSKIIAVVESKYRDKGRAF CCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCEECCCCHHHHHHHHHHHHHHCCCCC SEQDDTSEAIANNIIDFFSHEVKMGRLPKNLLPLQSGVGSIANAVIGGLAKGPFSNLTVY CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH TEVLQDTMLDLFDSGKLDAASSCSLSLSETPGFPRFFENWEKYFDKITLRPLSISNAPEP HHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHEEEEEEECCCCCHH IRRLGCIAMNTPVEIDIYAHANSTLVGGTRMINGLGGSGDFLRNGFLKIMHTPSSRPSKT HHHHCCEEECCCEEEEEEEECCCEEECCHHHCCCCCCCCHHHHCCCEEEEECCCCCCCCC DPTGISCVVPHCSHIDHTEHDLDCVVTEQGLADLRGLAPKDRAKRIIEKCAHPDYKPILS CCCCCEEEECCCCCCCCCCCCCEEEEECCCHHHHHCCCCHHHHHHHHHHHCCCCHHHHHH EYLAIASADCLKRKVGHEPQLWDRAFKMHLNLERNGTMKIKNWDVKVDLCE HHHHHHHHHHHHHHHCCCCHHHHHHHHEEEEECCCCEEEEEECEEEEEECC >Mature Secondary Structure SEYGTLQDRVRCKSLLNKVMSAEETIQFFKPGMNLGWSGFTPAGYPKAVPIALADHVEK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH NSLQGKMKFNLFIGASVGAETEDRWATLDMIDRRWPYQTGKNIAAGINEGRIRMGDKHLS CCCCCEEEEEEEEECCCCCCCCCCEEHHHHHHCCCCCCCCCCCCCCCCCCCEEECHHHHH LFAQDLGYGFYTKDSETGKLDLAIIEVSAITEDGGLVPTTSCGVIPEILMICDKIIVEVN HHHHHHCCCEEECCCCCCEEEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHEEEEC TGQPSFEGMHDIVVCNHPPKRQILGITHAGERIGTTYVPCDPSKIIAVVESKYRDKGRAF CCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCEECCCCHHHHHHHHHHHHHHCCCCC SEQDDTSEAIANNIIDFFSHEVKMGRLPKNLLPLQSGVGSIANAVIGGLAKGPFSNLTVY CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH TEVLQDTMLDLFDSGKLDAASSCSLSLSETPGFPRFFENWEKYFDKITLRPLSISNAPEP HHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHEEEEEEECCCCCHH IRRLGCIAMNTPVEIDIYAHANSTLVGGTRMINGLGGSGDFLRNGFLKIMHTPSSRPSKT HHHHCCEEECCCEEEEEEEECCCEEECCHHHCCCCCCCCHHHHCCCEEEEECCCCCCCCC DPTGISCVVPHCSHIDHTEHDLDCVVTEQGLADLRGLAPKDRAKRIIEKCAHPDYKPILS CCCCCEEEECCCCCCCCCCCCCEEEEECCCHHHHHCCCCHHHHHHHHHHHCCCCHHHHHH EYLAIASADCLKRKVGHEPQLWDRAFKMHLNLERNGTMKIKNWDVKVDLCE HHHHHHHHHHHHHHHCCCCHHHHHHHHEEEEECCCCEEEEEECEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: propionyl-CoA; succinate [C]
Specific reaction: propionyl-CoA + succinate = propionate + succinyl-CoA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8550525 [H]