Click here to switch to the map view.

The map label for this gene is abgB [H]

Identifier: 39995556

GI number: 39995556

Start: 478895

End: 480058

Strand: Direct

Name: abgB [H]

Synonym: GSU0448

Alternate gene names: 39995556

Gene position: 478895-480058 (Clockwise)

Preceding gene: 39995551

Following gene: 39995558

Centisome position: 12.56

GC content: 64.43

Gene sequence:

>1164_bases
ATGGATCTGGAACAAATCAAACAGGAACTGGTTGCGTTTGTCGATGCCCGGCGCGACGACTTTATCCATGTATCGGAGGA
GTTGTTCCACAATCCCGAGACAGGTCTCAACGAGGTGCGAAGCGCGGCTCTGCTGGCCGATCGTCTGGAAGCCGAGGGAT
TTCGGGTGGCCCGCGGGGTAGCGGGGCTGCCCACGGCGTTCCGGGCCGATTCCGGTGAAAAGGGACCGACCGTCGGCATT
ATCGCCGAGATGGATGCCCTGCCCGGGCTTGGCCACGCCTGTGGTCACAACGTGATCGCGGCGGCGGCTCTGGGCGCCGC
CATCGCCCTGCGCCGCGTGCTTCCCGCCGACGCGGCGCGCCTCGTGGTCCTGGGCACGCCGGCGGAGGAGATCGGGGTCG
GCAAGGTTGAGATGATCCGGCACGGCATCTTCGACGATGTGGAGTTCGCCATGATGGTGCATCCCTCGTCCCGGCGATAC
GTCATCAAGCACTACCTCGGGCTTGCCAAGATCCGGTTCGTCTTCCTGGGCAAACCGGCCCACGCTGCCGCCTATCCCGA
AGAGGGGATCAATGCCCTTGACGGCGTGATCCAGGCCTTCAACGCAGTCAATGCGCTGCGTCAGCAACTTCGGCAGGACG
TGCGGGTCCACGGCATCATCCCCGAAGGGGGTGTCGCGCCGAATATCATCCCCGAGAGGGCATCGGCGTTTTTCTACGTG
CGGGCCGACGACATGGCGGAACTGGAGCGGGTGAGGGAGCGGGTCATCGCCTGTGCCCGGGGTGCCGCCACCGCCACCGG
CTGCAGGCTGGAGATCGAGGAGGACCCGCGAGTCATGGCCCCCCTCAAGGTGAATTACCGCTTTTCGGATCTCTATGCCG
AACAGCTGGCGTATCTGGGGTTGGAGCTTTCCGAGAGCAGGCCCGACAGGAACAAGGGGTCGTCGGATATCGGCAACGTC
TCCCAGATCATGCCGACCATCCATCCCCACGTTCCCATCGGAGAGGGGATCAATATTCACAGTGACGCCTTTGCCCGGGC
CACGGTCTCGGCCCAAGGGAAAGCCGCCGTCGTGGAAGGGGCAACCGCCCTGGCCCTGACCGCTGCCGAACTGATCGCTC
GCCCGGAGCTGCGGGAAGAGATCCTTTGCGAGTTTCGCCGCTGA

Upstream 100 bases:

>100_bases
TGTGCTAACGTACCAAAACTAAAAGATTATGACAATAAAAACCTTGACAAACCGTCTGGTCTGGGTTCTAATTCTCATTA
AAATAGATTCGGTGGACTCC

Downstream 100 bases:

>100_bases
GACCCCTGCAATCCCCTCATTCGCTCGCGCCTGGGGGAAAAAGGAAAAAGCCTCAAGGAACGGTCATTTTTTTGCCTTGC
GGAAAAAAGATGGTATACCT

Product: hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MDLEQIKQELVAFVDARRDDFIHVSEELFHNPETGLNEVRSAALLADRLEAEGFRVARGVAGLPTAFRADSGEKGPTVGI
IAEMDALPGLGHACGHNVIAAAALGAAIALRRVLPADAARLVVLGTPAEEIGVGKVEMIRHGIFDDVEFAMMVHPSSRRY
VIKHYLGLAKIRFVFLGKPAHAAAYPEEGINALDGVIQAFNAVNALRQQLRQDVRVHGIIPEGGVAPNIIPERASAFFYV
RADDMAELERVRERVIACARGAATATGCRLEIEEDPRVMAPLKVNYRFSDLYAEQLAYLGLELSESRPDRNKGSSDIGNV
SQIMPTIHPHVPIGEGINIHSDAFARATVSAQGKAAVVEGATALALTAAELIARPELREEILCEFRR

Sequences:

>Translated_387_residues
MDLEQIKQELVAFVDARRDDFIHVSEELFHNPETGLNEVRSAALLADRLEAEGFRVARGVAGLPTAFRADSGEKGPTVGI
IAEMDALPGLGHACGHNVIAAAALGAAIALRRVLPADAARLVVLGTPAEEIGVGKVEMIRHGIFDDVEFAMMVHPSSRRY
VIKHYLGLAKIRFVFLGKPAHAAAYPEEGINALDGVIQAFNAVNALRQQLRQDVRVHGIIPEGGVAPNIIPERASAFFYV
RADDMAELERVRERVIACARGAATATGCRLEIEEDPRVMAPLKVNYRFSDLYAEQLAYLGLELSESRPDRNKGSSDIGNV
SQIMPTIHPHVPIGEGINIHSDAFARATVSAQGKAAVVEGATALALTAAELIARPELREEILCEFRR
>Mature_387_residues
MDLEQIKQELVAFVDARRDDFIHVSEELFHNPETGLNEVRSAALLADRLEAEGFRVARGVAGLPTAFRADSGEKGPTVGI
IAEMDALPGLGHACGHNVIAAAALGAAIALRRVLPADAARLVVLGTPAEEIGVGKVEMIRHGIFDDVEFAMMVHPSSRRY
VIKHYLGLAKIRFVFLGKPAHAAAYPEEGINALDGVIQAFNAVNALRQQLRQDVRVHGIIPEGGVAPNIIPERASAFFYV
RADDMAELERVRERVIACARGAATATGCRLEIEEDPRVMAPLKVNYRFSDLYAEQLAYLGLELSESRPDRNKGSSDIGNV
SQIMPTIHPHVPIGEGINIHSDAFARATVSAQGKAAVVEGATALALTAAELIARPELREEILCEFRR

Specific function: Required but not essential for aminobenzoyl-glutamate utilization. May participate in hydrolysis of aminobenzoyl- glutamate to aminobenzoate, either alone or in combination with AbgA [H]

COG id: COG1473

COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI58082085, Length=405, Percent_Identity=34.5679012345679, Blast_Score=224, Evalue=1e-58,
Organism=Escherichia coli, GI1787598, Length=346, Percent_Identity=32.0809248554913, Blast_Score=154, Evalue=8e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017145
- InterPro:   IPR010168
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 41881; Mature: 41881

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLEQIKQELVAFVDARRDDFIHVSEELFHNPETGLNEVRSAALLADRLEAEGFRVARGV
CCHHHHHHHHHHHHHCCCCCCEEECHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCC
AGLPTAFRADSGEKGPTVGIIAEMDALPGLGHACGHNVIAAAALGAAIALRRVLPADAAR
CCCCCHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
LVVLGTPAEEIGVGKVEMIRHGIFDDVEFAMMVHPSSRRYVIKHYLGLAKIRFVFLGKPA
EEEEECCHHHHCCCHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHEEEEEECCCC
HAAAYPEEGINALDGVIQAFNAVNALRQQLRQDVRVHGIIPEGGVAPNIIPERASAFFYV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCEEEEE
RADDMAELERVRERVIACARGAATATGCRLEIEEDPRVMAPLKVNYRFSDLYAEQLAYLG
ECCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEECCEEECCCHHHHHHHHHHHHC
LELSESRPDRNKGSSDIGNVSQIMPTIHPHVPIGEGINIHSDAFARATVSAQGKAAVVEG
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHEEECCCCCEEEECC
ATALALTAAELIARPELREEILCEFRR
CHHHHHHHHHHHHCHHHHHHHHHHCCC
>Mature Secondary Structure
MDLEQIKQELVAFVDARRDDFIHVSEELFHNPETGLNEVRSAALLADRLEAEGFRVARGV
CCHHHHHHHHHHHHHCCCCCCEEECHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCC
AGLPTAFRADSGEKGPTVGIIAEMDALPGLGHACGHNVIAAAALGAAIALRRVLPADAAR
CCCCCHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
LVVLGTPAEEIGVGKVEMIRHGIFDDVEFAMMVHPSSRRYVIKHYLGLAKIRFVFLGKPA
EEEEECCHHHHCCCHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHEEEEEECCCC
HAAAYPEEGINALDGVIQAFNAVNALRQQLRQDVRVHGIIPEGGVAPNIIPERASAFFYV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCEEEEE
RADDMAELERVRERVIACARGAATATGCRLEIEEDPRVMAPLKVNYRFSDLYAEQLAYLG
ECCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEECCEEECCCHHHHHHHHHHHHC
LELSESRPDRNKGSSDIGNVSQIMPTIHPHVPIGEGINIHSDAFARATVSAQGKAAVVEG
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHEEECCCCCEEEECC
ATALALTAAELIARPELREEILCEFRR
CHHHHHHHHHHHHCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 9829935 [H]