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The map label for this gene is 39995510

Identifier: 39995510

GI number: 39995510

Start: 434398

End: 434805

Strand: Direct

Name: 39995510

Synonym: GSU0402

Alternate gene names: NA

Gene position: 434398-434805 (Clockwise)

Preceding gene: 39995509

Following gene: 39995511

Centisome position: 11.39

GC content: 54.41

Gene sequence:

>408_bases
ATGGCATTGATCTCGTGGAGTGACTCGCTCAGCGTCAAGGTGAAGCAGTTCGACGACCAGCACAAAAAGCTGGTGGACAT
GGTGAACCAGTTGTTCGACGCCATGAAGGCCGGCAAGGGGAACCAGGTGATGGGGGACATCCTGAAGTCTCTCATCCAGT
ACACTCAGACCCACTTCGCCGCGGAAGAGCGGATTATGAAGCAGTACGGCTACCCTGACTTCGAAGCCCACAAAAAGGAG
CATAACGCTCTAGTTATGCAGGTGCTCGATCTGCAGAAGCAGTTCCAGGAAGGCAAGGCGGTGCTGACTCAGAACGTCAT
GACCTTCCTGCGCGACTGGCTTTCCAAGCATATCCAGGGAGACGACAAGAAATACGGCGTGTACCTGAACGGCAAAGGGG
TTTCCTAG

Upstream 100 bases:

>100_bases
CCGGTACATTGTTCCACTACGACACATTCTGCTAAAGTTTCCAACGGTTGTGCCGATAACTTTAATCATGGTAATTCAAT
TTGTTCGGAGGTGAACGTGC

Downstream 100 bases:

>100_bases
CCTCCCTGTCGCACAGGCTGGAACAAAGTATGCATAGCAATCGGACGTGTCCGTGAAGTCTCGCCCAGTGAGGAGTTGAC
GGGCACGTTCAAGTTTTTGA

Product: hemerythrin

Products: NA

Alternate protein names: McHr [H]

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MALISWSDSLSVKVKQFDDQHKKLVDMVNQLFDAMKAGKGNQVMGDILKSLIQYTQTHFAAEERIMKQYGYPDFEAHKKE
HNALVMQVLDLQKQFQEGKAVLTQNVMTFLRDWLSKHIQGDDKKYGVYLNGKGVS

Sequences:

>Translated_135_residues
MALISWSDSLSVKVKQFDDQHKKLVDMVNQLFDAMKAGKGNQVMGDILKSLIQYTQTHFAAEERIMKQYGYPDFEAHKKE
HNALVMQVLDLQKQFQEGKAVLTQNVMTFLRDWLSKHIQGDDKKYGVYLNGKGVS
>Mature_134_residues
ALISWSDSLSVKVKQFDDQHKKLVDMVNQLFDAMKAGKGNQVMGDILKSLIQYTQTHFAAEERIMKQYGYPDFEAHKKEH
NALVMQVLDLQKQFQEGKAVLTQNVMTFLRDWLSKHIQGDDKKYGVYLNGKGVS

Specific function: Oxygen-binding protein. May be involved in a storage mechanism or for delivery to oxygen-requiring enzymes. The oxygen- binding site contains two iron atoms [H]

COG id: COG2703

COG function: function code P; Hemerythrin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hemerythrin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012827
- InterPro:   IPR012312
- InterPro:   IPR016131 [H]

Pfam domain/function: PF01814 Hemerythrin [H]

EC number: NA

Molecular weight: Translated: 15525; Mature: 15394

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS00550 HEMERYTHRINS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALISWSDSLSVKVKQFDDQHKKLVDMVNQLFDAMKAGKGNQVMGDILKSLIQYTQTHFA
CCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
AEERIMKQYGYPDFEAHKKEHNALVMQVLDLQKQFQEGKAVLTQNVMTFLRDWLSKHIQG
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DDKKYGVYLNGKGVS
CCCEEEEEECCCCCC
>Mature Secondary Structure 
ALISWSDSLSVKVKQFDDQHKKLVDMVNQLFDAMKAGKGNQVMGDILKSLIQYTQTHFA
CEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
AEERIMKQYGYPDFEAHKKEHNALVMQVLDLQKQFQEGKAVLTQNVMTFLRDWLSKHIQG
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DDKKYGVYLNGKGVS
CCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA