Click here to switch to the map view.

The map label for this gene is nfrB [C]

Identifier: 39995423

GI number: 39995423

Start: 345463

End: 346566

Strand: Direct

Name: nfrB [C]

Synonym: GSU0314

Alternate gene names: 39995423

Gene position: 345463-346566 (Clockwise)

Preceding gene: 39995422

Following gene: 39995426

Centisome position: 9.06

GC content: 60.69

Gene sequence:

>1104_bases
ATGCCGATACGCCTCGGCGAGATGCTGATCAAAGCCGGAATGATAACCCATACGCAACTGGATGAGGCCCTGAAAGGGCA
GGTGATCTTCGGGGGCAGGCTCGGAACGAACCTCATTGAAATGGGGGTGATCGGTGAGGAAGAGCTCGCCCGGGTCCTGA
GCGAAAAGCTTCGGGTTCCCTGTGTCGATCCCGACGAGCTCATGGCAGTGCCCGATCACCTTTTGTCCCTTGTTCCCCGT
GATATGGTTGAACGCTACAAGATCGTCCCCCTCGGGGTCGACGGGCGACGGCTCAGGCTCGTCATGGCCGACCCCTCGGA
TCTGCCGGCCATTGATGAAATCGCTTTTCGTACGGGATTTGTCATTGTGCCGATGGTCGCTCCGGAAATCCGGCTTTTCA
TGGCACTGGAGAAATACTACGGCATCCGGCGCGAGGTGCGTGCCCTGCCTGTATCGGAGACTCTGGGGGGACGCAGATGT
ACTTATGGGACCAAGCGGCCTGCGGAGCAACTCATGCGCCGGGATGTGGTCGATTTTTCAACCTTGCCCGACAATGGTAA
GTATCTCCCCTGGGAAGGGGGCGACATCGATGATAATCGTATCGAGGCGGCCGAACGGTACACAATTGACGCTCTCTCCC
GGACGCTTGCCGACTGCCGCGAACGCGACGCTGTGGCCGATGCCCTGGTGGACTATGCCGGCCGCCTCTTTGGTTGCGCC
GGTCTGCTGCTCGTCATGAGGGATATGGCCGCAGGGTGGGAAGCGGTTGCCGGTCATGAGCGGTTGCGGGAGTTCGGGCA
GCTGAGGATATCGCTTCAGGAGGCATCACATGTCCGGACAGTGGTTGAGGAGCGGAGTGTGTATCTCGGCCCGCCGGGCA
ACATGCCGACTGACCGGCGGTTGGCGGAGGCCTTGGGCGGGGCTGGCGCGCCGGGGCTGATGCTCGTGCCCATGGTGATG
GGGAGGCGTGTGGTTACCATCCTCTGTGCCGCAGGGGAGATGGTCGCCTTGGGGGCTCGGTTGTCGGAAGCACAAACCAT
TGCCCGGAAAGGGGTGCTGGCGTTCGAGATTCTTATTTTGCGGGGTAAGATTCTGATGACATAG

Upstream 100 bases:

>100_bases
CCGGGGCGTCCGTAAAGGCGGTCGGGAATGATTGCATTTGATTTCAGCGGGACGCCGGCGATGGGGGGTACGCCGGGGCC
TCCCCGACATGGAGGGACCT

Downstream 100 bases:

>100_bases
CGATTGCCAGCCGGTCAGATGCCGGCCCATTCGGGCCGACCTGAACGGAAGGGGGGGCTGGGGACATCACCCTCCGGAGT
CGGGCTGCTGCGGCGTCAAT

Product: general secretion pathway protein E

Products: NA

Alternate protein names: General Secretion Pathway Protein E; General Secretory System II Protein E Domain Protein; MSHA Biogenesis Protein MshE; Type IV-A Pilus Assembly ATPase PilB; Response Regulator Receiver Protein; Type IV Pilus Assembly Protein PilB; General Secretory Pathway Protein E; Type IV Pilus Biogenesis Protein PilB; General Secretory System II Protein E-Like; GspIIEN Domain-Containing Protein; Pili Biogenesis Protein PilB-Like ATPase; Type II Secretory Pathway; Mannose-Sensitive Agglutinin; Response Regulator; General Secretory System II Protein E; Type Iv-A Pilus Assembly ATPase Pilb; Type IV Pilus Assembly Protein TapB; Type IV Fimbrial Assembly Protein PilB; Type IV Pilin; Response Regulator Receiver Domain-Containing Protein; General Secretion Protein E; Pilus Assembly Pathway ATPase PilB; Type IV Pilus Assembly Protein PilF; Serine/Threonine Kinase; General Secretory Pathway Component Cryptic; Tfp Pilus Assembly Protein PilB; Type II Secretory Pathway Protein; Type II Secretory Pathway ATPase PulE/Tfp Pilus Assembly; ATPase; Secretion System Protein E; Type II Secretory Pathway ATPase; Type IV Pilus Biogenesis ATPase PilB; General Secretory System II

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MPIRLGEMLIKAGMITHTQLDEALKGQVIFGGRLGTNLIEMGVIGEEELARVLSEKLRVPCVDPDELMAVPDHLLSLVPR
DMVERYKIVPLGVDGRRLRLVMADPSDLPAIDEIAFRTGFVIVPMVAPEIRLFMALEKYYGIRREVRALPVSETLGGRRC
TYGTKRPAEQLMRRDVVDFSTLPDNGKYLPWEGGDIDDNRIEAAERYTIDALSRTLADCRERDAVADALVDYAGRLFGCA
GLLLVMRDMAAGWEAVAGHERLREFGQLRISLQEASHVRTVVEERSVYLGPPGNMPTDRRLAEALGGAGAPGLMLVPMVM
GRRVVTILCAAGEMVALGARLSEAQTIARKGVLAFEILILRGKILMT

Sequences:

>Translated_367_residues
MPIRLGEMLIKAGMITHTQLDEALKGQVIFGGRLGTNLIEMGVIGEEELARVLSEKLRVPCVDPDELMAVPDHLLSLVPR
DMVERYKIVPLGVDGRRLRLVMADPSDLPAIDEIAFRTGFVIVPMVAPEIRLFMALEKYYGIRREVRALPVSETLGGRRC
TYGTKRPAEQLMRRDVVDFSTLPDNGKYLPWEGGDIDDNRIEAAERYTIDALSRTLADCRERDAVADALVDYAGRLFGCA
GLLLVMRDMAAGWEAVAGHERLREFGQLRISLQEASHVRTVVEERSVYLGPPGNMPTDRRLAEALGGAGAPGLMLVPMVM
GRRVVTILCAAGEMVALGARLSEAQTIARKGVLAFEILILRGKILMT
>Mature_366_residues
PIRLGEMLIKAGMITHTQLDEALKGQVIFGGRLGTNLIEMGVIGEEELARVLSEKLRVPCVDPDELMAVPDHLLSLVPRD
MVERYKIVPLGVDGRRLRLVMADPSDLPAIDEIAFRTGFVIVPMVAPEIRLFMALEKYYGIRREVRALPVSETLGGRRCT
YGTKRPAEQLMRRDVVDFSTLPDNGKYLPWEGGDIDDNRIEAAERYTIDALSRTLADCRERDAVADALVDYAGRLFGCAG
LLLVMRDMAAGWEAVAGHERLREFGQLRISLQEASHVRTVVEERSVYLGPPGNMPTDRRLAEALGGAGAPGLMLVPMVMG
RRVVTILCAAGEMVALGARLSEAQTIARKGVLAFEILILRGKILMT

Specific function: Required For Bacteriophage N4 Adsorption. May Be A Component Of The Phage Receptor. [C]

COG id: COG2804

COG function: function code NU; Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40432; Mature: 40301

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIRLGEMLIKAGMITHTQLDEALKGQVIFGGRLGTNLIEMGVIGEEELARVLSEKLRVP
CCCCHHHHHHHHCCHHHHHHHHHHCCCEEECCCCCCCHHHHCCCCHHHHHHHHHHHCCCC
CVDPDELMAVPDHLLSLVPRDMVERYKIVPLGVDGRRLRLVMADPSDLPAIDEIAFRTGF
CCCHHHHHHHHHHHHHHCCHHHHHHEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHCCC
VIVPMVAPEIRLFMALEKYYGIRREVRALPVSETLGGRRCTYGTKRPAEQLMRRDVVDFS
EEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHHHHHHCCC
TLPDNGKYLPWEGGDIDDNRIEAAERYTIDALSRTLADCRERDAVADALVDYAGRLFGCA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLLLVMRDMAAGWEAVAGHERLREFGQLRISLQEASHVRTVVEERSVYLGPPGNMPTDRR
HHHHHHHHHHCCHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHCCEEECCCCCCCHHHH
LAEALGGAGAPGLMLVPMVMGRRVVTILCAAGEMVALGARLSEAQTIARKGVLAFEILIL
HHHHHCCCCCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH
RGKILMT
HCCCCCC
>Mature Secondary Structure 
PIRLGEMLIKAGMITHTQLDEALKGQVIFGGRLGTNLIEMGVIGEEELARVLSEKLRVP
CCCHHHHHHHHCCHHHHHHHHHHCCCEEECCCCCCCHHHHCCCCHHHHHHHHHHHCCCC
CVDPDELMAVPDHLLSLVPRDMVERYKIVPLGVDGRRLRLVMADPSDLPAIDEIAFRTGF
CCCHHHHHHHHHHHHHHCCHHHHHHEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHCCC
VIVPMVAPEIRLFMALEKYYGIRREVRALPVSETLGGRRCTYGTKRPAEQLMRRDVVDFS
EEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHHHHHHCCC
TLPDNGKYLPWEGGDIDDNRIEAAERYTIDALSRTLADCRERDAVADALVDYAGRLFGCA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLLLVMRDMAAGWEAVAGHERLREFGQLRISLQEASHVRTVVEERSVYLGPPGNMPTDRR
HHHHHHHHHHCCHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHCCEEECCCCCCCHHHH
LAEALGGAGAPGLMLVPMVMGRRVVTILCAAGEMVALGARLSEAQTIARKGVLAFEILIL
HHHHHCCCCCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH
RGKILMT
HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA