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The map label for this gene is 39995395

Identifier: 39995395

GI number: 39995395

Start: 315412

End: 317049

Strand: Direct

Name: 39995395

Synonym: GSU0286

Alternate gene names: NA

Gene position: 315412-317049 (Clockwise)

Preceding gene: 39995391

Following gene: 39995396

Centisome position: 8.27

GC content: 64.41

Gene sequence:

>1638_bases
ATGGGAGCAAACGGAGGGAACGCAACGGGCAGGCCTGCGGCAGGAGGCGGGCAGTACGGGATCGTGCTGGCTGAACTCTA
TCGGGCGCTGAAGGCCCTGACGTTTTATCCTGAGGGGCATCCTCAGCGCGCCGAAGTCCTGGCACGGGCCCATGCCGCGC
TCCGGGGAATCCTCTGGGGAACAGAGCTCGTGTTCGTCATCGGTAAGAACGGTTTCACCGCCTCGGAGGGCGGGGCTTTT
GTGGAGCCGACAGCAATGACCCAGGCCCTTGCGCGGGAGCTGTTCATCCGACGGGTAAAGCGGCTCACGATCCTGCCCGA
CGTCGGCGAGGCCGACCTGTCCTTGTTTCTCACCCTTTTATCCATGGACCATCGCGACGTCCACGAGGCGGGAGGGATAG
AGGCGCTTATGGCCCAACTCGGCCTGACGACCATCTGGGTCAACGAAGTGGACCTTGACGAAATCCGGCGCAAGCGGGCG
GTCGTCGAGCAAACCCGTTCTGCTGCGGCCCATGACGGCACCTCTGACAATGTATTGTCTGCCATCGAAAAGGTGGCGGA
CCAGGACGGGACACCCGAAGAGGGCAGGGACGCGGCAGGACTGCAGGAAGAGGATCGGTTGGAGGCGGAAGCCATACTCG
GCCGTATGGAGCGGGAAACCAGCGACGATCGGTACCGGGAGCTCGCCCGCCTGTTGTCGGCCCGTTGCGCGGAACTCGGC
GACCGGGGTGAGTTCGAGCGGATTCTGTGGGTGTTGGTGAACCTGCACCGGCATGCGAAGAGTGAAGCGGCGAGCGCCGC
GCGGCGGGGGTATGCCCTTCTTGCCTTCGAGAAGGCGGCCGGGGGGCCCATGCTCCCGTTTCTCGTAGGGCGCCTGGAGG
AGCGCGGGGAGGAGCGGGAGACCCTCGTCGACCTGTTCCGGGAGATTGGCGAACCAGCGGTTGCGCTGCTGGTTGAACGC
CTCACGCTGGCAGAGAGCAGGAATGCCCGGAAGCTGATCATCGATGCACTCGTGGCAATCGGTGCGGAGTCGGTGGCTCT
TCTGACCGAGCATCTTGTCGACCGTCGCTGGTACGTGGTGCGGAACGCGGCGGTCATCCTCGGCGAGATCGGCGATCCTG
CAAGCGCCGAACCCCTGCGGGCCTGTTTAGTTCATACGGACGTAAGGGTACGCCGGGAGGCGCTCAGGAGCCTCGTCAAG
ATCGGCGGTGAACAGGCAGAGGACGCGATTATCGGCCTGCTCGCAGCGGAGGATAATCTGACGAAGCGTCATGCCGTGAT
CTCGCTTGGTCTCCTGAAGAGCCGCCGCGCGGTGGAGCCTCTTTGTGCTCTCATCGAACGCCGCGATCCCTTTAAAAAAT
CGCTTGCCTTCAAGAGGGACGTCATCCAGTCCCTCGGCCGGATCGGAGACCGCCGGGCGGTGCCGTCTCTGCTCCGGCTG
CTGGAGCATCGGCCCTGGTTCGGCCGACGCCGTTGGGACGACGTCCGGATGGCGGTGGTAACCACCTTGGCCCAGATCGG
TGACCCGGCCGCTCTGGGACTGCTGGATTCGCTGGCAGCGAAAGGCGGCATGCTTGCGGCGGCCAGTGCCGATGCAGCAG
AAGACATCCGCCGTCGAGGGGGGGTCGTTAATGATTAA

Upstream 100 bases:

>100_bases
TGTCAATCGACCGTCGGCATTAGGTGAAGTCTGTGAGTTTGACACCTGTTTGTCGCGTACGTTACTATCACATGCGATCG
CTTTTCGACCCGGAGGGGGA

Downstream 100 bases:

>100_bases
ACTTGCTCAGCCTCAGGCTCAGCGGCTCGTTCTTCTTCTGGCGGGCGCCGTGCGTTCGGTCTTGCTCTACCCCGGCTCCC
ATCCGGCGGTGGTCCAGCAG

Product: PBS lyase

Products: NA

Alternate protein names: HEAT-Like Repeat-Containing Protein; HEAT Repeat-Containing Protein; PBS Lyase HEAT Domain Protein Repeat-Containing Protein; Phycocyanin Alpha Phycocyanobilin Lyase; Pbs Lyase Heat-Like Repeat Protein; Peptidase; Phycocyanin Alpha Phycocyanobilin Lyase Related Protein; PBS Lyase HEAT-Like Repeat Domain Protein

Number of amino acids: Translated: 545; Mature: 544

Protein sequence:

>545_residues
MGANGGNATGRPAAGGGQYGIVLAELYRALKALTFYPEGHPQRAEVLARAHAALRGILWGTELVFVIGKNGFTASEGGAF
VEPTAMTQALARELFIRRVKRLTILPDVGEADLSLFLTLLSMDHRDVHEAGGIEALMAQLGLTTIWVNEVDLDEIRRKRA
VVEQTRSAAAHDGTSDNVLSAIEKVADQDGTPEEGRDAAGLQEEDRLEAEAILGRMERETSDDRYRELARLLSARCAELG
DRGEFERILWVLVNLHRHAKSEAASAARRGYALLAFEKAAGGPMLPFLVGRLEERGEERETLVDLFREIGEPAVALLVER
LTLAESRNARKLIIDALVAIGAESVALLTEHLVDRRWYVVRNAAVILGEIGDPASAEPLRACLVHTDVRVRREALRSLVK
IGGEQAEDAIIGLLAAEDNLTKRHAVISLGLLKSRRAVEPLCALIERRDPFKKSLAFKRDVIQSLGRIGDRRAVPSLLRL
LEHRPWFGRRRWDDVRMAVVTTLAQIGDPAALGLLDSLAAKGGMLAAASADAAEDIRRRGGVVND

Sequences:

>Translated_545_residues
MGANGGNATGRPAAGGGQYGIVLAELYRALKALTFYPEGHPQRAEVLARAHAALRGILWGTELVFVIGKNGFTASEGGAF
VEPTAMTQALARELFIRRVKRLTILPDVGEADLSLFLTLLSMDHRDVHEAGGIEALMAQLGLTTIWVNEVDLDEIRRKRA
VVEQTRSAAAHDGTSDNVLSAIEKVADQDGTPEEGRDAAGLQEEDRLEAEAILGRMERETSDDRYRELARLLSARCAELG
DRGEFERILWVLVNLHRHAKSEAASAARRGYALLAFEKAAGGPMLPFLVGRLEERGEERETLVDLFREIGEPAVALLVER
LTLAESRNARKLIIDALVAIGAESVALLTEHLVDRRWYVVRNAAVILGEIGDPASAEPLRACLVHTDVRVRREALRSLVK
IGGEQAEDAIIGLLAAEDNLTKRHAVISLGLLKSRRAVEPLCALIERRDPFKKSLAFKRDVIQSLGRIGDRRAVPSLLRL
LEHRPWFGRRRWDDVRMAVVTTLAQIGDPAALGLLDSLAAKGGMLAAASADAAEDIRRRGGVVND
>Mature_544_residues
GANGGNATGRPAAGGGQYGIVLAELYRALKALTFYPEGHPQRAEVLARAHAALRGILWGTELVFVIGKNGFTASEGGAFV
EPTAMTQALARELFIRRVKRLTILPDVGEADLSLFLTLLSMDHRDVHEAGGIEALMAQLGLTTIWVNEVDLDEIRRKRAV
VEQTRSAAAHDGTSDNVLSAIEKVADQDGTPEEGRDAAGLQEEDRLEAEAILGRMERETSDDRYRELARLLSARCAELGD
RGEFERILWVLVNLHRHAKSEAASAARRGYALLAFEKAAGGPMLPFLVGRLEERGEERETLVDLFREIGEPAVALLVERL
TLAESRNARKLIIDALVAIGAESVALLTEHLVDRRWYVVRNAAVILGEIGDPASAEPLRACLVHTDVRVRREALRSLVKI
GGEQAEDAIIGLLAAEDNLTKRHAVISLGLLKSRRAVEPLCALIERRDPFKKSLAFKRDVIQSLGRIGDRRAVPSLLRLL
EHRPWFGRRRWDDVRMAVVTTLAQIGDPAALGLLDSLAAKGGMLAAASADAAEDIRRRGGVVND

Specific function: Unknown

COG id: COG1413

COG function: function code C; FOG: HEAT repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59479; Mature: 59348

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGANGGNATGRPAAGGGQYGIVLAELYRALKALTFYPEGHPQRAEVLARAHAALRGILWG
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHC
TELVFVIGKNGFTASEGGAFVEPTAMTQALARELFIRRVKRLTILPDVGEADLSLFLTLL
CEEEEEECCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
SMDHRDVHEAGGIEALMAQLGLTTIWVNEVDLDEIRRKRAVVEQTRSAAAHDGTSDNVLS
HCCCHHHHHHCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
AIEKVADQDGTPEEGRDAAGLQEEDRLEAEAILGRMERETSDDRYRELARLLSARCAELG
HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
DRGEFERILWVLVNLHRHAKSEAASAARRGYALLAFEKAAGGPMLPFLVGRLEERGEERE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCHHH
TLVDLFREIGEPAVALLVERLTLAESRNARKLIIDALVAIGAESVALLTEHLVDRRWYVV
HHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHE
RNAAVILGEIGDPASAEPLRACLVHTDVRVRREALRSLVKIGGEQAEDAIIGLLAAEDNL
ECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEEEECCCCC
TKRHAVISLGLLKSRRAVEPLCALIERRDPFKKSLAFKRDVIQSLGRIGDRRAVPSLLRL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LEHRPWFGRRRWDDVRMAVVTTLAQIGDPAALGLLDSLAAKGGMLAAASADAAEDIRRRG
HHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCC
GVVND
CCCCC
>Mature Secondary Structure 
GANGGNATGRPAAGGGQYGIVLAELYRALKALTFYPEGHPQRAEVLARAHAALRGILWG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHC
TELVFVIGKNGFTASEGGAFVEPTAMTQALARELFIRRVKRLTILPDVGEADLSLFLTLL
CEEEEEECCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
SMDHRDVHEAGGIEALMAQLGLTTIWVNEVDLDEIRRKRAVVEQTRSAAAHDGTSDNVLS
HCCCHHHHHHCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
AIEKVADQDGTPEEGRDAAGLQEEDRLEAEAILGRMERETSDDRYRELARLLSARCAELG
HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
DRGEFERILWVLVNLHRHAKSEAASAARRGYALLAFEKAAGGPMLPFLVGRLEERGEERE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCHHH
TLVDLFREIGEPAVALLVERLTLAESRNARKLIIDALVAIGAESVALLTEHLVDRRWYVV
HHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHE
RNAAVILGEIGDPASAEPLRACLVHTDVRVRREALRSLVKIGGEQAEDAIIGLLAAEDNL
ECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEEEECCCCC
TKRHAVISLGLLKSRRAVEPLCALIERRDPFKKSLAFKRDVIQSLGRIGDRRAVPSLLRL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LEHRPWFGRRRWDDVRMAVVTTLAQIGDPAALGLLDSLAAKGGMLAAASADAAEDIRRRG
HHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCC
GVVND
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA