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The map label for this gene is 39995314

Identifier: 39995314

GI number: 39995314

Start: 214293

End: 215651

Strand: Direct

Name: 39995314

Synonym: GSU0204

Alternate gene names: NA

Gene position: 214293-215651 (Clockwise)

Preceding gene: 39995313

Following gene: 39995315

Centisome position: 5.62

GC content: 64.39

Gene sequence:

>1359_bases
ATGAAGATTCTCCTCATCCAGCCCCCAAGTCACTATCCCCTGATGGATCAGGTCTACCTGTTCGAGCCTCTTGCCCTGGA
ATACCTTGGAGCCGGGGCCAGGCTCGAAGGCCACGAGGTGTACCTCCTCGACGCGCGGCTGGAGTCGGACATTTCCCGGG
TACTCGGCGAGTTCCGCCCCGATGTGGTGGGAGTGACGGCCTTCACGAGCCAGGTCACCATTGCGCACCGGATTGCGAAG
GAGGTCCGCGAACTGCTGCCGGACTCCTTTCTCGTGGTGGGCGGGCACCATGCCACGGTGCGGCCGGCGGACTTCAACGA
AAGCGCCTTTGATGCCGTAGTGATCGGCGAGGGGGTGGCCGCCCTGCGCGAACTCCTCGCCGCCCGGGAGAGGGGCGCTC
CCCTGAAGGACATTGCCGGGCTCGGCGTCCCGTCACCGGCAGGGATGCTGTTCACGCCGCCCCGTCCCTACACCCCCCTT
GACGAACTTCCCCTTCCGGCACGGGATCTGACGGCCCGCTACCGCGCCGGCTATTTCAGTGAGTGGTTCACCCCCCTTGC
CTCAATCAGGACTTCTCTCGGATGTACGGCCCGCTGCACCTTTTGCGCCCTCTGGTCCATCACCGGCGGCGCCTACCTGC
GGCGGGACCCGGACCGCGTAGTGGAGGAGCTGAAGGGGATCGCCGAGCCGAATGTCTTTTTCTGCGACGACGAGTCCATG
TGCGACACGAAGCGGATGGCGCTTCTGGCCGACAGGATCAGGGCCGCCGGCATCAGGAAGAACTACTTTCTCTATGCCCG
CGTCGATACCATTGTGCGGCATCCGGAACTCTTCCGCGCCTGGGCCGACATCGGACTGAAGCAGGTGTTCGTAGGCATGG
AGGATTTCTCGGACGCGCGGCTGGCGGCCATGAAGAAAGGTGTCACCACCGATCAGCAGGCGAGGGCGGCAACGATTCTC
AGGGATCTCGGGGTGATGATGTACGCCTCGTTCATGGTTGACCCGGACTACTCCCGCGACGACTTCCGCGCCCTGGTCGC
CTATGTCAGGAAGCTCCGGCTCACCTACGCCACCTTCACGGTCATGACGCCACTGCCGGGAACCGAGCTCCATGCCGCGC
GGGAGGCCGAACTCCTCTCCACCAAACCGGAGTTGTATGACATGCTCCACGCCCTGCTGCCGACCCGGCTGCCGCTCCCC
GAGTTTTACGAGGAAATGGCGGGCCTCTACGGGAAGGCCGTGCCGATTCACCGCTCGCTGCCGACGCTCCTGAAGTTCGG
GCTCCACGGCCTGTTGCTGCGCATGCGCCTGTTCGGAACATTTCTCGCCCGGCTGCGTGCCGCCCATCTTGATTACTGA

Upstream 100 bases:

>100_bases
CTGATGGCGCCCCAGGAGGGCCTGTCGCTCCGGTAAAAAAAGCTTGCCAATAATAGAGCAATTGCACTAAATAGAGTAAA
TACTCTAGGAGGTGCAGGCC

Downstream 100 bases:

>100_bases
GCGGAACCGACGTATGCTCCTTCCATGACTACCAGGGAACGGATCATCGAGACTGCCATCACCCTGTTCAACGAGAAGGG
GACCAAGGCGGTCACCACCA

Product: radical SAM protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MKILLIQPPSHYPLMDQVYLFEPLALEYLGAGARLEGHEVYLLDARLESDISRVLGEFRPDVVGVTAFTSQVTIAHRIAK
EVRELLPDSFLVVGGHHATVRPADFNESAFDAVVIGEGVAALRELLAARERGAPLKDIAGLGVPSPAGMLFTPPRPYTPL
DELPLPARDLTARYRAGYFSEWFTPLASIRTSLGCTARCTFCALWSITGGAYLRRDPDRVVEELKGIAEPNVFFCDDESM
CDTKRMALLADRIRAAGIRKNYFLYARVDTIVRHPELFRAWADIGLKQVFVGMEDFSDARLAAMKKGVTTDQQARAATIL
RDLGVMMYASFMVDPDYSRDDFRALVAYVRKLRLTYATFTVMTPLPGTELHAAREAELLSTKPELYDMLHALLPTRLPLP
EFYEEMAGLYGKAVPIHRSLPTLLKFGLHGLLLRMRLFGTFLARLRAAHLDY

Sequences:

>Translated_452_residues
MKILLIQPPSHYPLMDQVYLFEPLALEYLGAGARLEGHEVYLLDARLESDISRVLGEFRPDVVGVTAFTSQVTIAHRIAK
EVRELLPDSFLVVGGHHATVRPADFNESAFDAVVIGEGVAALRELLAARERGAPLKDIAGLGVPSPAGMLFTPPRPYTPL
DELPLPARDLTARYRAGYFSEWFTPLASIRTSLGCTARCTFCALWSITGGAYLRRDPDRVVEELKGIAEPNVFFCDDESM
CDTKRMALLADRIRAAGIRKNYFLYARVDTIVRHPELFRAWADIGLKQVFVGMEDFSDARLAAMKKGVTTDQQARAATIL
RDLGVMMYASFMVDPDYSRDDFRALVAYVRKLRLTYATFTVMTPLPGTELHAAREAELLSTKPELYDMLHALLPTRLPLP
EFYEEMAGLYGKAVPIHRSLPTLLKFGLHGLLLRMRLFGTFLARLRAAHLDY
>Mature_452_residues
MKILLIQPPSHYPLMDQVYLFEPLALEYLGAGARLEGHEVYLLDARLESDISRVLGEFRPDVVGVTAFTSQVTIAHRIAK
EVRELLPDSFLVVGGHHATVRPADFNESAFDAVVIGEGVAALRELLAARERGAPLKDIAGLGVPSPAGMLFTPPRPYTPL
DELPLPARDLTARYRAGYFSEWFTPLASIRTSLGCTARCTFCALWSITGGAYLRRDPDRVVEELKGIAEPNVFFCDDESM
CDTKRMALLADRIRAAGIRKNYFLYARVDTIVRHPELFRAWADIGLKQVFVGMEDFSDARLAAMKKGVTTDQQARAATIL
RDLGVMMYASFMVDPDYSRDDFRALVAYVRKLRLTYATFTVMTPLPGTELHAAREAELLSTKPELYDMLHALLPTRLPLP
EFYEEMAGLYGKAVPIHRSLPTLLKFGLHGLLLRMRLFGTFLARLRAAHLDY

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 50584; Mature: 50584

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: PS01278 UPF0004

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILLIQPPSHYPLMDQVYLFEPLALEYLGAGARLEGHEVYLLDARLESDISRVLGEFRP
CEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCEEEEEECHHHHHHHHHHHHHCC
DVVGVTAFTSQVTIAHRIAKEVRELLPDSFLVVGGHHATVRPADFNESAFDAVVIGEGVA
CEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEECCCCCCCCCCCEEEECCCHH
ALRELLAARERGAPLKDIAGLGVPSPAGMLFTPPRPYTPLDELPLPARDLTARYRAGYFS
HHHHHHHHHHCCCCHHHHHCCCCCCCCCEEECCCCCCCCHHCCCCCHHHHHHHHHCCHHH
EWFTPLASIRTSLGCTARCTFCALWSITGGAYLRRDPDRVVEELKGIAEPNVFFCDDESM
HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEECCHHHHHHHHHCCCCCCEEEECCCCH
CDTKRMALLADRIRAAGIRKNYFLYARVDTIVRHPELFRAWADIGLKQVFVGMEDFSDAR
HHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHCHHHHHHHHHCCHHHHHHCHHHCCHHH
LAAMKKGVTTDQQARAATILRDLGVMMYASFMVDPDYSRDDFRALVAYVRKLRLTYATFT
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEE
VMTPLPGTELHAAREAELLSTKPELYDMLHALLPTRLPLPEFYEEMAGLYGKAVPIHRSL
EECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHH
PTLLKFGLHGLLLRMRLFGTFLARLRAAHLDY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKILLIQPPSHYPLMDQVYLFEPLALEYLGAGARLEGHEVYLLDARLESDISRVLGEFRP
CEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCEEEEEECHHHHHHHHHHHHHCC
DVVGVTAFTSQVTIAHRIAKEVRELLPDSFLVVGGHHATVRPADFNESAFDAVVIGEGVA
CEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEECCCCCCCCCCCEEEECCCHH
ALRELLAARERGAPLKDIAGLGVPSPAGMLFTPPRPYTPLDELPLPARDLTARYRAGYFS
HHHHHHHHHHCCCCHHHHHCCCCCCCCCEEECCCCCCCCHHCCCCCHHHHHHHHHCCHHH
EWFTPLASIRTSLGCTARCTFCALWSITGGAYLRRDPDRVVEELKGIAEPNVFFCDDESM
HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEECCHHHHHHHHHCCCCCCEEEECCCCH
CDTKRMALLADRIRAAGIRKNYFLYARVDTIVRHPELFRAWADIGLKQVFVGMEDFSDAR
HHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHCHHHHHHHHHCCHHHHHHCHHHCCHHH
LAAMKKGVTTDQQARAATILRDLGVMMYASFMVDPDYSRDDFRALVAYVRKLRLTYATFT
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEE
VMTPLPGTELHAAREAELLSTKPELYDMLHALLPTRLPLPEFYEEMAGLYGKAVPIHRSL
EECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHH
PTLLKFGLHGLLLRMRLFGTFLARLRAAHLDY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]