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The map label for this gene is yqeB [H]

Identifier: 39995312

GI number: 39995312

Start: 212880

End: 213620

Strand: Direct

Name: yqeB [H]

Synonym: GSU0202

Alternate gene names: 39995312

Gene position: 212880-213620 (Clockwise)

Preceding gene: 39995311

Following gene: 39995313

Centisome position: 5.58

GC content: 68.56

Gene sequence:

>741_bases
ATGGCGCGGCTCGCCCGGCTGGGCGAGCCTTTTGCGCTGGCAACGGTGGTGGCGAGCTCGGGCTCGTCACCCCGCAAGGC
AGGCGCCAAGATGCTCATTCGGGGTGACGGCAGCGCCCTGGGCACCGTCGGCGGCGGGCATGTCGAGCAGGACACCCTGG
CGGCGGCCCGAGCGTCCCTGGCGGAGGGGGCACCCCGCACCCTGGAGTTCGTTCTGACCGAAGAGCACGGCTACGCCTGC
GGCGGCAGCATGTCGGTCTTTATAGAGCCCCAAGGGCGTCGGCCGCTGCTGGTCATGTTCGGTGCCGGTCACGTGGGGCG
GGCTGTTACGGCCCTTGCCCACGGCTGCGGCTTTCGGGTGATCGTGGTTGACGAGCGCCCCGAATACGCCGTTCCGGCAC
TACTGCCGGGGGCCGATGAGATCGTCTGCGTCCCGGTCGGTGCGGCGTTCGCGCGGCTGACGCTGGATCGGGAGAGTTTC
GCGGTCATTGCCACGCCGGGACATGTTCATGACTTCGATGCCGTGCGGGGGTGTCTTGCCACGGAAGTCGGATTCATCGG
ACTGCTCGGCAGTCGCCGCAAACGGGAGGCACTCATGAAAACCCTGACGGAGGAGGGGTACGAGGCGGGACGCCAGGCCC
GGGTGGTGACGCCGGTGGGCCTCGACATCGGTGCCCAGACCCCGGAGGAGATCGCGGTCAGTATCGTGGGACAGCTGGTG
AAGCTCAGGAGGCAGGCATGA

Upstream 100 bases:

>100_bases
CGGAAACCGTCAAGCGGGCCGGCGGCCGGGCCGCCTGAGGGGCTGAACTCATCGAATCGAAAAGGACATATCAGTGACCG
ATCTGGAACTGTACGAGGAA

Downstream 100 bases:

>100_bases
GGGGCTCCGTAGCGGCACTGCTGCTTGCTGCCGGCCGCTCCATCCGCATGGGGCGGTGCAAGCAGCTCCTGCCCCTGGGG
AACACCACGGTGCTGGGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MARLARLGEPFALATVVASSGSSPRKAGAKMLIRGDGSALGTVGGGHVEQDTLAAARASLAEGAPRTLEFVLTEEHGYAC
GGSMSVFIEPQGRRPLLVMFGAGHVGRAVTALAHGCGFRVIVVDERPEYAVPALLPGADEIVCVPVGAAFARLTLDRESF
AVIATPGHVHDFDAVRGCLATEVGFIGLLGSRRKREALMKTLTEEGYEAGRQARVVTPVGLDIGAQTPEEIAVSIVGQLV
KLRRQA

Sequences:

>Translated_246_residues
MARLARLGEPFALATVVASSGSSPRKAGAKMLIRGDGSALGTVGGGHVEQDTLAAARASLAEGAPRTLEFVLTEEHGYAC
GGSMSVFIEPQGRRPLLVMFGAGHVGRAVTALAHGCGFRVIVVDERPEYAVPALLPGADEIVCVPVGAAFARLTLDRESF
AVIATPGHVHDFDAVRGCLATEVGFIGLLGSRRKREALMKTLTEEGYEAGRQARVVTPVGLDIGAQTPEEIAVSIVGQLV
KLRRQA
>Mature_245_residues
ARLARLGEPFALATVVASSGSSPRKAGAKMLIRGDGSALGTVGGGHVEQDTLAAARASLAEGAPRTLEFVLTEEHGYACG
GSMSVFIEPQGRRPLLVMFGAGHVGRAVTALAHGCGFRVIVVDERPEYAVPALLPGADEIVCVPVGAAFARLTLDRESFA
VIATPGHVHDFDAVRGCLATEVGFIGLLGSRRKREALMKTLTEEGYEAGRQARVVTPVGLDIGAQTPEEIAVSIVGQLVK
LRRQA

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789240, Length=250, Percent_Identity=38, Blast_Score=159, Evalue=2e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR017695
- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: NA

Molecular weight: Translated: 25664; Mature: 25533

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLARLGEPFALATVVASSGSSPRKAGAKMLIRGDGSALGTVGGGHVEQDTLAAARASL
CCCHHHCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCEEECCCCCCCCHHHHHHHHHHH
AEGAPRTLEFVLTEEHGYACGGSMSVFIEPQGRRPLLVMFGAGHVGRAVTALAHGCGFRV
HCCCCCEEEEEEEECCCCEECCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHCCCEEE
IVVDERPEYAVPALLPGADEIVCVPVGAAFARLTLDRESFAVIATPGHVHDFDAVRGCLA
EEEECCCCCCCCEECCCCCCEEEEECCCEEEEEEECCCCEEEEECCCCCCCHHHHHHHHH
TEVGFIGLLGSRRKREALMKTLTEEGYEAGRQARVVTPVGLDIGAQTPEEIAVSIVGQLV
HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHH
KLRRQA
HHHHCC
>Mature Secondary Structure 
ARLARLGEPFALATVVASSGSSPRKAGAKMLIRGDGSALGTVGGGHVEQDTLAAARASL
CCHHHCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCEEECCCCCCCCHHHHHHHHHHH
AEGAPRTLEFVLTEEHGYACGGSMSVFIEPQGRRPLLVMFGAGHVGRAVTALAHGCGFRV
HCCCCCEEEEEEEECCCCEECCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHCCCEEE
IVVDERPEYAVPALLPGADEIVCVPVGAAFARLTLDRESFAVIATPGHVHDFDAVRGCLA
EEEECCCCCCCCEECCCCCCEEEEECCCEEEEEEECCCCEEEEECCCCCCCHHHHHHHHH
TEVGFIGLLGSRRKREALMKTLTEEGYEAGRQARVVTPVGLDIGAQTPEEIAVSIVGQLV
HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHH
KLRRQA
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]