| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995290
Identifier: 39995290
GI number: 39995290
Start: 193592
End: 194227
Strand: Direct
Name: 39995290
Synonym: GSU0179
Alternate gene names: NA
Gene position: 193592-194227 (Clockwise)
Preceding gene: 39995288
Following gene: 39995291
Centisome position: 5.08
GC content: 61.32
Gene sequence:
>636_bases ATGAAGGTGGTCGCGTTTAACGGCAGTCCCAAGGCGGATGGGAATACCTGGCATGCGCTGAAGATGGTGACTGCGGAACT GGAAAGTGAAGGGATCGAAACCGAGATCGTCCACGTGGGCAACAAGGTTGTCCGGGGCTGTATTGCCTGCGGCCAGTGCG CCAAGAACAAGAACGAGCGCTGCGTGCTGCCGGGCGACGAGGTCAACGAGTGGATCCAGAAGATGAAGCAGGCCGACGGG ATCATCATCAGTTCGCCGGTCTACTATTCCGCCATTGCCGGCACGATGAAGTCGTTCCTGGACCGGGCCTTTTACGTGAC CGGCGTCAACGACGGCATGCTGCGGCACAAGGTCGGCGCGTCGGTGGTGGCGGTGCGCCGTTCGGGCGGCATCCCGACGT TTAACCAGTTGAACAACTTCCTGACCTATGCCGAGATGCTGGTGCCGACGTCCAATTACTGGAACGTGATCCACGGCCGG GCTCCGGGCGAGGCGACCCAGGACGAGGAAGGGGTCCAGATCATGCGGGTGCTGGGGAAAAACATGGCCTGGCTGCTGAA GCTGGTGGAGCACGGCAAGGGTGCGGTCACCCCGCCGGAGCGGGAAACGAAGACGTACATGAGCTTCATCCGCTGA
Upstream 100 bases:
>100_bases CGTATCGAATAAGTACGTAATTGACGGATTAGCACCTATGGGCAAAGATAGCCCAATCGGTTGGGAAAGTGAACCGCAAT TTGCACGGGAGGGTAGCGAT
Downstream 100 bases:
>100_bases TGCCTATGGGAATGTGCATGGCGGCCGATCGGCCGCCAGTGCCGTTTCTTTCGTTGAAATGCGGGAGCCGGCTGAATCAC AATGGGAAAGAAGCGTGGTC
Product: NADPH-dependent FMN reductase domain-containing protein
Products: NA
Alternate protein names: Isf-2; MCJ-2; Mj2 [H]
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MKVVAFNGSPKADGNTWHALKMVTAELESEGIETEIVHVGNKVVRGCIACGQCAKNKNERCVLPGDEVNEWIQKMKQADG IIISSPVYYSAIAGTMKSFLDRAFYVTGVNDGMLRHKVGASVVAVRRSGGIPTFNQLNNFLTYAEMLVPTSNYWNVIHGR APGEATQDEEGVQIMRVLGKNMAWLLKLVEHGKGAVTPPERETKTYMSFIR
Sequences:
>Translated_211_residues MKVVAFNGSPKADGNTWHALKMVTAELESEGIETEIVHVGNKVVRGCIACGQCAKNKNERCVLPGDEVNEWIQKMKQADG IIISSPVYYSAIAGTMKSFLDRAFYVTGVNDGMLRHKVGASVVAVRRSGGIPTFNQLNNFLTYAEMLVPTSNYWNVIHGR APGEATQDEEGVQIMRVLGKNMAWLLKLVEHGKGAVTPPERETKTYMSFIR >Mature_211_residues MKVVAFNGSPKADGNTWHALKMVTAELESEGIETEIVHVGNKVVRGCIACGQCAKNKNERCVLPGDEVNEWIQKMKQADG IIISSPVYYSAIAGTMKSFLDRAFYVTGVNDGMLRHKVGASVVAVRRSGGIPTFNQLNNFLTYAEMLVPTSNYWNVIHGR APGEATQDEEGVQIMRVLGKNMAWLLKLVEHGKGAVTPPERETKTYMSFIR
Specific function: Redox-active protein probably involved in electron transport [H]
COG id: COG0655
COG function: function code R; Multimeric flavodoxin WrbA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family. Isf subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 23247; Mature: 23247
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVVAFNGSPKADGNTWHALKMVTAELESEGIETEIVHVGNKVVRGCIACGQCAKNKNER CEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE CVLPGDEVNEWIQKMKQADGIIISSPVYYSAIAGTMKSFLDRAFYVTGVNDGMLRHKVGA EECCCHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHCC SVVAVRRSGGIPTFNQLNNFLTYAEMLVPTSNYWNVIHGRAPGEATQDEEGVQIMRVLGK CEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCC NMAWLLKLVEHGKGAVTPPERETKTYMSFIR CHHHHHHHHHCCCCCCCCCCHHHHHHHHHHC >Mature Secondary Structure MKVVAFNGSPKADGNTWHALKMVTAELESEGIETEIVHVGNKVVRGCIACGQCAKNKNER CEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE CVLPGDEVNEWIQKMKQADGIIISSPVYYSAIAGTMKSFLDRAFYVTGVNDGMLRHKVGA EECCCHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHCC SVVAVRRSGGIPTFNQLNNFLTYAEMLVPTSNYWNVIHGRAPGEATQDEEGVQIMRVLGK CEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCC NMAWLLKLVEHGKGAVTPPERETKTYMSFIR CHHHHHHHHHCCCCCCCCCCHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]