| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995276
Identifier: 39995276
GI number: 39995276
Start: 181411
End: 182766
Strand: Direct
Name: 39995276
Synonym: GSU0165
Alternate gene names: NA
Gene position: 181411-182766 (Clockwise)
Preceding gene: 39995275
Following gene: 39995278
Centisome position: 4.76
GC content: 39.23
Gene sequence:
>1356_bases ATGAAAACGAGCGTTAAAACAATAAGCAAGAAACTACAGCACTCTTTGCAAAAAGGAATAACTGAATTGTCAGTTGCTGG CTATAAGTCAATTGGCAGGCTACAAACAATTGATTTAAAGCCGCTTACAATATTATCTGGATCAAATAGCTCTGGTAAAT CTAGTATAATGCAACCACTACTACTGTTAAAACAAACATTAGAGGCCGGATATGATCCTGGTCCGTTATTGCTTAATGGA CCAAACCTAAAGTATAATTCTGCAAGTGACATTTTGACTCAATGTAAGAACAATAAACTGAATTCATTTTCTGTTGGAAT TCGAGTTGCTAAAAATGAACTACTCACTACATCATATAAAAAACAGATTAATAAAGGGTTCAAAATAGACGAAATGACTT ACGGTGATAAAAATGAAATTCATTTCAATCAAAGTATGTCGGCATCAGATACAGAAAGAATCGTACCAAACGAATTTAAA GATCTTTACAAAGTATTGCCTAAAAAATACAGGCCAGAGATAGAGTGGCATATTACGCGAAATAGGTGTTTTCTTGAGGC AGTACCAAAGTCTAAAGATGGTTCACAAATGGGACCAAACGTTTCGCCTAGTTCAATTGTCGCAAACGCAATACGAAATA TTATTCATTTGCCTGGTCTGAGAGGAAACCCAGCAAGAACATATCCTATTACAGCGGTGGGGAGAAGTTTTCCTGGTACG TTTGAAACTTATTCAGCGAGTATTCTTGCAGACTGGCAAGATAGTAAAAACAATAAATTGAGAGAGCTGTGTGCTGATCT TGAAAGATTAGGATTAACCTGGAAGGTTGCCGCAAGTCGAATTAATGACACTCAAGTTGAACTAAAAGTAGGCCGCCTGC CTCACGCTACTAGGGGTGGCGCAATGGATTTAGTCAATATTGCTGATGTTGGTTTTGGCGTTTCTCAGACGTTACCAGTT GTTGTTGCACTACATGTTGCAGCGCCAGGCCAAACAGTTTATCTCGAACAACCAGAAATTCATCTTCACCCGAGAGCACA AGCTGTAATGGCAGAAGTCATAACTGACGCAGTGAATAGAGGTGTAAAAGTAGTTGTTGAAACACACAGTTCAATATTTC TCTTGACCATGCAGTCATTGGTAGCGGAAGAGAAATTGCCTTCTGACGTCGTTAGCTTACATTGGTTTTCTCGGGATGAT GACGGCCTTACGATTGTGACAAGTGCATCACTTGATAGCTCTGGAAGCTTTGGGCAATGGCCTGAAGACTTCGGTGCAGT AAATTTGGAGATCGAAAGTAGATATTTAGATGCGTTCGAGTCTAAATTAGGAGTGGATTCTAGTGGCTGCAAATAA
Upstream 100 bases:
>100_bases GAGATTGATGCTACCTTTCGTCTGGCGGCGTAAGGGAGTTAAGTAAACTGTCCCCGGAACTCCCGGAACTCGTCCCAAAG TGTTAAGGAGTGTCACGGCT
Downstream 100 bases:
>100_bases ATCTCGTATTTTTGTCGTTGATACTTGTGTGGTTAGGTCAGCTGGGGGCGAAGATGCTGTTTTTCCGACTTCCAAACATT GTAGAGATTTCTTAAAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MKTSVKTISKKLQHSLQKGITELSVAGYKSIGRLQTIDLKPLTILSGSNSSGKSSIMQPLLLLKQTLEAGYDPGPLLLNG PNLKYNSASDILTQCKNNKLNSFSVGIRVAKNELLTTSYKKQINKGFKIDEMTYGDKNEIHFNQSMSASDTERIVPNEFK DLYKVLPKKYRPEIEWHITRNRCFLEAVPKSKDGSQMGPNVSPSSIVANAIRNIIHLPGLRGNPARTYPITAVGRSFPGT FETYSASILADWQDSKNNKLRELCADLERLGLTWKVAASRINDTQVELKVGRLPHATRGGAMDLVNIADVGFGVSQTLPV VVALHVAAPGQTVYLEQPEIHLHPRAQAVMAEVITDAVNRGVKVVVETHSSIFLLTMQSLVAEEKLPSDVVSLHWFSRDD DGLTIVTSASLDSSGSFGQWPEDFGAVNLEIESRYLDAFESKLGVDSSGCK
Sequences:
>Translated_451_residues MKTSVKTISKKLQHSLQKGITELSVAGYKSIGRLQTIDLKPLTILSGSNSSGKSSIMQPLLLLKQTLEAGYDPGPLLLNG PNLKYNSASDILTQCKNNKLNSFSVGIRVAKNELLTTSYKKQINKGFKIDEMTYGDKNEIHFNQSMSASDTERIVPNEFK DLYKVLPKKYRPEIEWHITRNRCFLEAVPKSKDGSQMGPNVSPSSIVANAIRNIIHLPGLRGNPARTYPITAVGRSFPGT FETYSASILADWQDSKNNKLRELCADLERLGLTWKVAASRINDTQVELKVGRLPHATRGGAMDLVNIADVGFGVSQTLPV VVALHVAAPGQTVYLEQPEIHLHPRAQAVMAEVITDAVNRGVKVVVETHSSIFLLTMQSLVAEEKLPSDVVSLHWFSRDD DGLTIVTSASLDSSGSFGQWPEDFGAVNLEIESRYLDAFESKLGVDSSGCK >Mature_451_residues MKTSVKTISKKLQHSLQKGITELSVAGYKSIGRLQTIDLKPLTILSGSNSSGKSSIMQPLLLLKQTLEAGYDPGPLLLNG PNLKYNSASDILTQCKNNKLNSFSVGIRVAKNELLTTSYKKQINKGFKIDEMTYGDKNEIHFNQSMSASDTERIVPNEFK DLYKVLPKKYRPEIEWHITRNRCFLEAVPKSKDGSQMGPNVSPSSIVANAIRNIIHLPGLRGNPARTYPITAVGRSFPGT FETYSASILADWQDSKNNKLRELCADLERLGLTWKVAASRINDTQVELKVGRLPHATRGGAMDLVNIADVGFGVSQTLPV VVALHVAAPGQTVYLEQPEIHLHPRAQAVMAEVITDAVNRGVKVVVETHSSIFLLTMQSLVAEEKLPSDVVSLHWFSRDD DGLTIVTSASLDSSGSFGQWPEDFGAVNLEIESRYLDAFESKLGVDSSGCK
Specific function: Unknown
COG id: COG4938
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49480; Mature: 49480
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTSVKTISKKLQHSLQKGITELSVAGYKSIGRLQTIDLKPLTILSGSNSSGKSSIMQPL CCCHHHHHHHHHHHHHHHCHHHHHHHCHHHCCCEEEECCCCEEEEECCCCCCHHHHHHHH LLLKQTLEAGYDPGPLLLNGPNLKYNSASDILTQCKNNKLNSFSVGIRVAKNELLTTSYK HHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEEEECHHHHHHHHH KQINKGFKIDEMTYGDKNEIHFNQSMSASDTERIVPNEFKDLYKVLPKKYRPEIEWHITR HHHHCCCCEEECCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEC NRCFLEAVPKSKDGSQMGPNVSPSSIVANAIRNIIHLPGLRGNPARTYPITAVGRSFPGT CEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCC FETYSASILADWQDSKNNKLRELCADLERLGLTWKVAASRINDTQVELKVGRLPHATRGG HHHCCEEEEEECCCCCCCHHHHHHHHHHHHCCEEEEHHHCCCCCEEEEEECCCCCCCCCC AMDLVNIADVGFGVSQTLPVVVALHVAAPGQTVYLEQPEIHLHPRAQAVMAEVITDAVNR CEEEEEHHHCCCCHHHHCEEEEEEEEECCCCEEEEECCCEEECCHHHHHHHHHHHHHHCC GVKVVVETHSSIFLLTMQSLVAEEKLPSDVVSLHWFSRDDDGLTIVTSASLDSSGSFGQW CEEEEEECCCCEEEHHHHHHHHHHCCCCHHEEEEEECCCCCCEEEEEECCCCCCCCCCCC PEDFGAVNLEIESRYLDAFESKLGVDSSGCK CHHHCEEEEEEHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKTSVKTISKKLQHSLQKGITELSVAGYKSIGRLQTIDLKPLTILSGSNSSGKSSIMQPL CCCHHHHHHHHHHHHHHHCHHHHHHHCHHHCCCEEEECCCCEEEEECCCCCCHHHHHHHH LLLKQTLEAGYDPGPLLLNGPNLKYNSASDILTQCKNNKLNSFSVGIRVAKNELLTTSYK HHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEEEECHHHHHHHHH KQINKGFKIDEMTYGDKNEIHFNQSMSASDTERIVPNEFKDLYKVLPKKYRPEIEWHITR HHHHCCCCEEECCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEC NRCFLEAVPKSKDGSQMGPNVSPSSIVANAIRNIIHLPGLRGNPARTYPITAVGRSFPGT CEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCC FETYSASILADWQDSKNNKLRELCADLERLGLTWKVAASRINDTQVELKVGRLPHATRGG HHHCCEEEEEECCCCCCCHHHHHHHHHHHHCCEEEEHHHCCCCCEEEEEECCCCCCCCCC AMDLVNIADVGFGVSQTLPVVVALHVAAPGQTVYLEQPEIHLHPRAQAVMAEVITDAVNR CEEEEEHHHCCCCHHHHCEEEEEEEEECCCCEEEEECCCEEECCHHHHHHHHHHHHHHCC GVKVVVETHSSIFLLTMQSLVAEEKLPSDVVSLHWFSRDDDGLTIVTSASLDSSGSFGQW CEEEEEECCCCEEEHHHHHHHHHHCCCCHHEEEEEECCCCCCEEEEEECCCCCCCCCCCC PEDFGAVNLEIESRYLDAFESKLGVDSSGCK CHHHCEEEEEEHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA