| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995197
Identifier: 39995197
GI number: 39995197
Start: 97614
End: 98021
Strand: Direct
Name: 39995197
Synonym: GSU0086
Alternate gene names: NA
Gene position: 97614-98021 (Clockwise)
Preceding gene: 39995195
Following gene: 39995204
Centisome position: 2.56
GC content: 57.35
Gene sequence:
>408_bases ATGGTGGAGCCCTTTTATCCTTCCGCCAGTTTTGCCGCCAGGTCCGAGAATGCCTGGCCCTTTACCTTGAGCTCCACGGG GCGGTTGTTGTCTCCGAAGCCGATGGTGATCACGCCACCCAGCAGGTGGTTTTCCATTTCCGCGAACAAAACTGCCCTGG GATTGATCAGCAGGTTGCCGGACTGCACGAAGCCGCGCTTCAGCAGGTTGGCCGCGAATTGTTCCTGCTCCGTTCTGGAT ACCTTCTTAAAGAGCTGTTTCCGGATGGCTGGTCCGTCGAACCAGACATCCATGATCCGGCTGGCATCGGTCACCAGCGG ATTGTCCTCCGGTGTGGTCATCTGGACGGCGACAACCCGGTCGATGTTGATGAAGCGTTCCATGGGGTGCCCCCTTACTT CCTATTAA
Upstream 100 bases:
>100_bases ATCCTGAAAGACGAGCCGGAAGGTGCGGATGTCGGGGGTCTCGTCAACGATTTCCTCGATCGTTGCCAGGTGGGGGAGGT AGATGTTCTTGTGATCGCAC
Downstream 100 bases:
>100_bases TGTCGTCAATGATCTGGGCGATGTCGATCCCCACCGGGCAGGCACGAATGCATCGTCCGCAGCCGGTGCAGAGGCGCTGG CCGAACTTGTCGTGGTAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MVEPFYPSASFAARSENAWPFTLSSTGRLLSPKPMVITPPSRWFSISANKTALGLISRLPDCTKPRFSRLAANCSCSVLD TFLKSCFRMAGPSNQTSMIRLASVTSGLSSGVVIWTATTRSMLMKRSMGCPLTSY
Sequences:
>Translated_135_residues MVEPFYPSASFAARSENAWPFTLSSTGRLLSPKPMVITPPSRWFSISANKTALGLISRLPDCTKPRFSRLAANCSCSVLD TFLKSCFRMAGPSNQTSMIRLASVTSGLSSGVVIWTATTRSMLMKRSMGCPLTSY >Mature_135_residues MVEPFYPSASFAARSENAWPFTLSSTGRLLSPKPMVITPPSRWFSISANKTALGLISRLPDCTKPRFSRLAANCSCSVLD TFLKSCFRMAGPSNQTSMIRLASVTSGLSSGVVIWTATTRSMLMKRSMGCPLTSY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14683; Mature: 14683
Theoretical pI: Translated: 10.97; Mature: 10.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 8.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEPFYPSASFAARSENAWPFTLSSTGRLLSPKPMVITPPSRWFSISANKTALGLISRLP CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEECCCCEEEECCCCHHHHHHHHCC DCTKPRFSRLAANCSCSVLDTFLKSCFRMAGPSNQTSMIRLASVTSGLSSGVVIWTATTR CCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHCCCCCCEEEEEECHH SMLMKRSMGCPLTSY HHHHHHHCCCCCCCC >Mature Secondary Structure MVEPFYPSASFAARSENAWPFTLSSTGRLLSPKPMVITPPSRWFSISANKTALGLISRLP CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEECCCCEEEECCCCHHHHHHHHCC DCTKPRFSRLAANCSCSVLDTFLKSCFRMAGPSNQTSMIRLASVTSGLSSGVVIWTATTR CCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHCCCCCCEEEEEECHH SMLMKRSMGCPLTSY HHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA